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The map label for this gene is scoP [H]

Identifier: 77456298

GI number: 77456298

Start: 75636

End: 76271

Strand: Reverse

Name: scoP [H]

Synonym: Pfl01_0070

Alternate gene names: 77456298

Gene position: 76271-75636 (Counterclockwise)

Preceding gene: 77456299

Following gene: 77456297

Centisome position: 1.18

GC content: 59.91

Gene sequence:

>636_bases
ATGACTCGAACCCAGAAAACCGTCTTCATCCTCGTCGCTGTGATCGCGCTGATCCTCGGCCTGACCGTCAACAAAGTGCT
GAGCGGCAAGGGCCAGGGCGACCCGACCGCACTGATCGACGCCGGCATCATCCTGCTGCCGCAGAGCCGCAACCTGCCGG
ACGTGACGATGACCAATCAGGACGGCCAGCCGGTCACGGTCAACGAGCTCAAGGGCAAGTGGAGCCTGCTGTTCTTCGGC
TACACCTTCTGCCCGGACATCTGCCCGACCACCCTCGCCCAGCTGCGCCAGATCAAAAGCGAACTGCCGAAGGATGCTGT
GGATAAATTGCAGATCGTGCTGGTCAGCGTCGATCCGAACCGCGACAACCCTGCGCAGTTGAAGCAGTACCTGGGCTACT
TCGATCCACAGTTCATCGGCCTGACGCCGAAGTCGATCGACGAGCTGCAGAAGGTGGCGAACGCAGTGAGCATTCCGTTC
ATTCCGGCGGACACCAGCAAGCCGAATTACACCGTGGATCACAGTGGGAACCTGGCGGTGATCGGGCCGGATGGTACGCA
GCGCGGGTTTATTCGGGCACCGTTGAATAATGCCAAGCTGGTTGCGCAGTTACCGGTGATGTTGAACCGCAAGTAA

Upstream 100 bases:

>100_bases
CTCGGCCGCACGCGGCGATCAACACCTTCAAGTACTCTATCTGGTACCTGTTTCTGCTGTTCATCGCCCTGCTCGTAGAC
CACTACTTACTGTTGAACCT

Downstream 100 bases:

>100_bases
GAAGATCAAAAGCTAGCCCTCACCCTAGCCCTCTCCCGGAGGGAGAGGGGACTGATTGGGGGATATTGAAGAATTACGCC
GACGTGAAATTGCAGCATGG

Product: electron transport protein SCO1/SenC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MTRTQKTVFILVAVIALILGLTVNKVLSGKGQGDPTALIDAGIILLPQSRNLPDVTMTNQDGQPVTVNELKGKWSLLFFG
YTFCPDICPTTLAQLRQIKSELPKDAVDKLQIVLVSVDPNRDNPAQLKQYLGYFDPQFIGLTPKSIDELQKVANAVSIPF
IPADTSKPNYTVDHSGNLAVIGPDGTQRGFIRAPLNNAKLVAQLPVMLNRK

Sequences:

>Translated_211_residues
MTRTQKTVFILVAVIALILGLTVNKVLSGKGQGDPTALIDAGIILLPQSRNLPDVTMTNQDGQPVTVNELKGKWSLLFFG
YTFCPDICPTTLAQLRQIKSELPKDAVDKLQIVLVSVDPNRDNPAQLKQYLGYFDPQFIGLTPKSIDELQKVANAVSIPF
IPADTSKPNYTVDHSGNLAVIGPDGTQRGFIRAPLNNAKLVAQLPVMLNRK
>Mature_210_residues
TRTQKTVFILVAVIALILGLTVNKVLSGKGQGDPTALIDAGIILLPQSRNLPDVTMTNQDGQPVTVNELKGKWSLLFFGY
TFCPDICPTTLAQLRQIKSELPKDAVDKLQIVLVSVDPNRDNPAQLKQYLGYFDPQFIGLTPKSIDELQKVANAVSIPFI
PADTSKPNYTVDHSGNLAVIGPDGTQRGFIRAPLNNAKLVAQLPVMLNRK

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SCO1/2 family [H]

Homologues:

Organism=Homo sapiens, GI4759068, Length=132, Percent_Identity=32.5757575757576, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI281182727, Length=135, Percent_Identity=31.1111111111111, Blast_Score=84, Evalue=6e-17,
Organism=Homo sapiens, GI281182722, Length=135, Percent_Identity=31.1111111111111, Blast_Score=84, Evalue=6e-17,
Organism=Homo sapiens, GI281182716, Length=135, Percent_Identity=31.1111111111111, Blast_Score=84, Evalue=6e-17,
Organism=Homo sapiens, GI153791313, Length=135, Percent_Identity=31.1111111111111, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17531419, Length=134, Percent_Identity=32.8358208955224, Blast_Score=79, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6319498, Length=133, Percent_Identity=41.3533834586466, Blast_Score=100, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6319511, Length=126, Percent_Identity=36.5079365079365, Blast_Score=82, Evalue=7e-17,
Organism=Drosophila melanogaster, GI19920710, Length=116, Percent_Identity=34.4827586206897, Blast_Score=83, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003782
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF02630 SCO1-SenC [H]

EC number: NA

Molecular weight: Translated: 22990; Mature: 22859

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRTQKTVFILVAVIALILGLTVNKVLSGKGQGDPTALIDAGIILLPQSRNLPDVTMTNQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEECCCCCCCEEEECC
DGQPVTVNELKGKWSLLFFGYTFCPDICPTTLAQLRQIKSELPKDAVDKLQIVLVSVDPN
CCCCEEHHHCCCCEEEEEEEHHHCCCCHHHHHHHHHHHHHHCCHHHHCCEEEEEEEECCC
RDNPAQLKQYLGYFDPQFIGLTPKSIDELQKVANAVSIPFIPADTSKPNYTVDHSGNLAV
CCCHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHCCCEEECCCCCCCEEEECCCCEEE
IGPDGTQRGFIRAPLNNAKLVAQLPVMLNRK
ECCCCCCCCEEECCCCCCEEEEECCHHHCCC
>Mature Secondary Structure 
TRTQKTVFILVAVIALILGLTVNKVLSGKGQGDPTALIDAGIILLPQSRNLPDVTMTNQ
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEECCCCCCCEEEECC
DGQPVTVNELKGKWSLLFFGYTFCPDICPTTLAQLRQIKSELPKDAVDKLQIVLVSVDPN
CCCCEEHHHCCCCEEEEEEEHHHCCCCHHHHHHHHHHHHHHCCHHHHCCEEEEEEEECCC
RDNPAQLKQYLGYFDPQFIGLTPKSIDELQKVANAVSIPFIPADTSKPNYTVDHSGNLAV
CCCHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHCCCEEECCCCCCCEEEECCCCEEE
IGPDGTQRGFIRAPLNNAKLVAQLPVMLNRK
ECCCCCCCCEEECCCCCCEEEEECCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8226670 [H]