Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is engB

Identifier: 77456283

GI number: 77456283

Start: 60118

End: 60762

Strand: Direct

Name: engB

Synonym: Pfl01_0055

Alternate gene names: 77456283

Gene position: 60118-60762 (Clockwise)

Preceding gene: 77456275

Following gene: 77456285

Centisome position: 0.93

GC content: 57.98

Gene sequence:

>645_bases
ATGCAACTCAAGAATCCCATCCTCGGCCTGTGCCAACAGTCCACGTTCATGCTCAGTGCCGCCAAAGTCGATCAGTGCCC
CGACGACGAAGGCTTCGAAGTGGCGTTCGCCGGTCGTTCCAACGCCGGTAAATCCAGTGCGCTGAACACTCTGACTCACG
CCAGCCTGGCGCGCACCTCGAAAACCCCGGGTCGCACACAGCTGTTGAACTTCTTCAAGCTAGACGATGAACGGCGTCTG
GTCGACCTCCCGGGCTACGGTTATGCAAAAGTACCAATCCCGCTGAAGCAACACTGGCAGCGTCACCTTGAGGCTTACCT
CGGTGGCCGCGAGAGTTTGAAGGGGCTGATTCTGATGATGGACATCCGTCATCCAATGACCGACTTCGACCTGCTGATGC
TGGACTGGGCCGTTGCCGCCGGCATGCCGATGCACATTCTGCTGACCAAGGCAGACAAGCTGACCTACGGCGCAGCCAAG
AACACGCTGCTCAAGGTGCAGTCGGAAATCCGTAAGGGTTGGGGCGATCAAGTGACGATCCAGCTGTTCTCCGCACCAAA
ACGCATGGGCCTGGAAGAGGCTTACACTGTGTTGGCGGGCTGGATGGAGTTGGCGGATAAAGGCGCTGAATTGCCTGCTG
AGTAA

Upstream 100 bases:

>100_bases
AGCACACACAAAATCTGCGGCATTATATACTGGCGTCACTGAAACGGAAGCGACACCGCGTTCCGCGCCTAATCCCGGCG
CCGCCCACATCGGAAATCCC

Downstream 100 bases:

>100_bases
ATCGCAGGCAAAAAAAGCCCCGGACTTCATATGGGGAGGGAGAAGTTCCGGGGTTTAAGTTCCGAACCGCTAGGGCGGGG
TTCAGATATCTGCCAACACT

Product: ribosome biogenesis GTP-binding protein YsxC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MQLKNPILGLCQQSTFMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLTHASLARTSKTPGRTQLLNFFKLDDERRL
VDLPGYGYAKVPIPLKQHWQRHLEAYLGGRESLKGLILMMDIRHPMTDFDLLMLDWAVAAGMPMHILLTKADKLTYGAAK
NTLLKVQSEIRKGWGDQVTIQLFSAPKRMGLEEAYTVLAGWMELADKGAELPAE

Sequences:

>Translated_214_residues
MQLKNPILGLCQQSTFMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLTHASLARTSKTPGRTQLLNFFKLDDERRL
VDLPGYGYAKVPIPLKQHWQRHLEAYLGGRESLKGLILMMDIRHPMTDFDLLMLDWAVAAGMPMHILLTKADKLTYGAAK
NTLLKVQSEIRKGWGDQVTIQLFSAPKRMGLEEAYTVLAGWMELADKGAELPAE
>Mature_214_residues
MQLKNPILGLCQQSTFMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLTHASLARTSKTPGRTQLLNFFKLDDERRL
VDLPGYGYAKVPIPLKQHWQRHLEAYLGGRESLKGLILMMDIRHPMTDFDLLMLDWAVAAGMPMHILLTKADKLTYGAAK
NTLLKVQSEIRKGWGDQVTIQLFSAPKRMGLEEAYTVLAGWMELADKGAELPAE

Specific function: Necessary for normal cell division and for the maintenance of normal septation

COG id: COG0218

COG function: function code R; Predicted GTPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain

Homologues:

Organism=Homo sapiens, GI56549685, Length=155, Percent_Identity=35.4838709677419, Blast_Score=89, Evalue=4e-18,
Organism=Escherichia coli, GI145693205, Length=192, Percent_Identity=54.1666666666667, Blast_Score=204, Evalue=3e-54,
Organism=Saccharomyces cerevisiae, GI6320543, Length=129, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ENGB_PSEPF (Q3KKA7)

Other databases:

- EMBL:   CP000094
- RefSeq:   YP_345788.1
- ProteinModelPortal:   Q3KKA7
- SMR:   Q3KKA7
- STRING:   Q3KKA7
- GeneID:   3717491
- GenomeReviews:   CP000094_GR
- KEGG:   pfo:Pfl01_0055
- eggNOG:   COG0218
- HOGENOM:   HBG447097
- OMA:   THFVTSA
- ProtClustDB:   PRK00454
- BioCyc:   PFLU205922:PFL_0055-MONOMER
- GO:   GO:0005622
- HAMAP:   MF_00321
- InterPro:   IPR019987
- InterPro:   IPR002917
- TIGRFAMs:   TIGR03598

Pfam domain/function: PF01926 MMR_HSR1

EC number: NA

Molecular weight: Translated: 23748; Mature: 23748

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLKNPILGLCQQSTFMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLTHASLARTS
CCCCCHHHHHHCCHHHEEEHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC
KTPGRTQLLNFFKLDDERRLVDLPGYGYAKVPIPLKQHWQRHLEAYLGGRESLKGLILMM
CCCCHHHHHHHHCCCCCCEEEECCCCCEEECCCCHHHHHHHHHHHHHCCHHHHCEEEEEE
DIRHPMTDFDLLMLDWAVAAGMPMHILLTKADKLTYGAAKNTLLKVQSEIRKGWGDQVTI
ECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHCCCHHHHHHHHHHHHHHHCCCCEEEE
QLFSAPKRMGLEEAYTVLAGWMELADKGAELPAE
EEECCCHHCCHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MQLKNPILGLCQQSTFMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLTHASLARTS
CCCCCHHHHHHCCHHHEEEHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC
KTPGRTQLLNFFKLDDERRLVDLPGYGYAKVPIPLKQHWQRHLEAYLGGRESLKGLILMM
CCCCHHHHHHHHCCCCCCEEEECCCCCEEECCCCHHHHHHHHHHHHHCCHHHHCEEEEEE
DIRHPMTDFDLLMLDWAVAAGMPMHILLTKADKLTYGAAKNTLLKVQSEIRKGWGDQVTI
ECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHCCCHHHHHHHHHHHHHHHCCCCEEEE
QLFSAPKRMGLEEAYTVLAGWMELADKGAELPAE
EEECCCHHCCHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA