Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77456271

Identifier: 77456271

GI number: 77456271

Start: 48030

End: 48494

Strand: Reverse

Name: 77456271

Synonym: Pfl01_0043

Alternate gene names: NA

Gene position: 48494-48030 (Counterclockwise)

Preceding gene: 77456272

Following gene: 77456270

Centisome position: 0.75

GC content: 58.28

Gene sequence:

>465_bases
ATGAAGGGTTTAAAGACATTGGCAGCCGCCCTGCTCCTGGGCGGTAGTGCCATGGCGATGGCGGCCAATGACGGCCAGGC
GCGGGTCAACGAACTGCTGAGTTCCGACCCGCAATACAGGGAAACCTGGGAAGGCGTGGTGAAGAAGGAAGAACGCCTGC
CGGAATGGGTAATGAACCTCTCCGGCGCGCCGGACCAACAGATGAATGCCGTGACTGAAGATGGCGATCAGTATCTGGTG
GGGCCGCTCTGCGAATCGCAGGACAAATGCCTCAACCACCGTCTGATCGTCGCCTTCAGCTTCGACAAGAAACATGCTTA
CGCCATGTTGGTCGATGTGCCCGAAGGACTGCCGGCCGACAAGTCGCCAACGCGACATGCCACCTACCGCTTCCTCGGCA
AGCCCGACCAGGGCATGCAGGATCTGTTGATGGAAACGCTGAAGAAAGATCCGAACTGGTATTGA

Upstream 100 bases:

>100_bases
TCGCGGGCACCGCCACGGGTATCGCCAAGATTCTCTTTGTCGTGTTCCTGGTGATGTTCATCGCTTCCTTCTTCTTTGGC
CGTCGCGGTCGAGGTTGAAC

Downstream 100 bases:

>100_bases
ACACGAGGGCAGCCGAAAAGCTGTCCTCCATTGCGTCGGCCCGAGGAAGGCCGGTGCATGACCAGGGGGCCGGGACGTTC
TGACTGTTGCAGGGTCGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MKGLKTLAAALLLGGSAMAMAANDGQARVNELLSSDPQYRETWEGVVKKEERLPEWVMNLSGAPDQQMNAVTEDGDQYLV
GPLCESQDKCLNHRLIVAFSFDKKHAYAMLVDVPEGLPADKSPTRHATYRFLGKPDQGMQDLLMETLKKDPNWY

Sequences:

>Translated_154_residues
MKGLKTLAAALLLGGSAMAMAANDGQARVNELLSSDPQYRETWEGVVKKEERLPEWVMNLSGAPDQQMNAVTEDGDQYLV
GPLCESQDKCLNHRLIVAFSFDKKHAYAMLVDVPEGLPADKSPTRHATYRFLGKPDQGMQDLLMETLKKDPNWY
>Mature_154_residues
MKGLKTLAAALLLGGSAMAMAANDGQARVNELLSSDPQYRETWEGVVKKEERLPEWVMNLSGAPDQQMNAVTEDGDQYLV
GPLCESQDKCLNHRLIVAFSFDKKHAYAMLVDVPEGLPADKSPTRHATYRFLGKPDQGMQDLLMETLKKDPNWY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ivy family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014453 [H]

Pfam domain/function: PF08816 Ivy [H]

EC number: NA

Molecular weight: Translated: 17170; Mature: 17170

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGLKTLAAALLLGGSAMAMAANDGQARVNELLSSDPQYRETWEGVVKKEERLPEWVMNL
CCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC
SGAPDQQMNAVTEDGDQYLVGPLCESQDKCLNHRLIVAFSFDKKHAYAMLVDVPEGLPAD
CCCCCHHHHHHHCCCCEEEECCCCCCHHHHCCCEEEEEEECCCCCEEEEEEECCCCCCCC
KSPTRHATYRFLGKPDQGMQDLLMETLKKDPNWY
CCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKGLKTLAAALLLGGSAMAMAANDGQARVNELLSSDPQYRETWEGVVKKEERLPEWVMNL
CCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC
SGAPDQQMNAVTEDGDQYLVGPLCESQDKCLNHRLIVAFSFDKKHAYAMLVDVPEGLPAD
CCCCCHHHHHHHCCCCEEEECCCCCCHHHHCCCEEEEEEECCCCCEEEEEEECCCCCCCC
KSPTRHATYRFLGKPDQGMQDLLMETLKKDPNWY
CCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]