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The map label for this gene is ygdQ [C]

Identifier: 77456260

GI number: 77456260

Start: 34278

End: 35045

Strand: Direct

Name: ygdQ [C]

Synonym: Pfl01_0032

Alternate gene names: 77456260

Gene position: 34278-35045 (Clockwise)

Preceding gene: 77456259

Following gene: 77456261

Centisome position: 0.53

GC content: 58.07

Gene sequence:

>768_bases
ATGGAATGGCTGACCAACCCTGAGATCTGGGTTGCCTTCTTCACCCTGACCGCCCTGGAAATCGTTCTGGGCATCGATAA
CATCATCATGATTTCGATCCTGGTCAGCCGCATGCCCAAACACATGCAGCAGCGCACCCGGATCTTCGGTCTTGGCCTGG
CCATGATCACGCGGATCCTGTTGCTGCTGTCGATCACCTGGGTCATGCGCCTCACCGCCGACCTGTTCGAAGTGTTCGGC
CAGGGCATTTCCGGTCGCGACCTGATCCTGTTCTTCGGTGGCCTGTTCCTGCTGTGGAAAAGCTCCCAGGAGATGTACCA
CGCACTGGAAGGTGAAGACGAAAGCGACGACGAGCCTTCGGGCAAGGGCGGCAACTTCCTCTACACCATCATCCAGATCG
CGATCATCGACATCGTGTTCTCGCTGGACTCGGTGATCACCGCCGTCGGCATGGTGTCCCACGTACCGGTGATGGTCGCG
GCGATCATCGTGGCGGTGCTGGTGATGATGGCGGCCTCGGGCAAGATCAGCGAATTCATCGATAAGCACCCGTCGCTGAA
AATGCTCGCGCTGTCGTTCCTGCTGGTGGTCGGTACCGTGCTGATTGCCGAATCGTTCGACGTGCACGTACCGAAAGGCT
ACGTCTACTTCGCCATGGCGTTCTCGCTGGCGGTCGAGGCGATCAACATCAAGATGCGCACCGCCATCGCGAAAAAACGC
AAACAGCAGGATCCGGTGAAACTGCGCAAGGATATTCCGGGTCAGTAA

Upstream 100 bases:

>100_bases
GCACTTTCCCGCTGTTCAGCACGTTGTAACGGCACCAAACTCACCAGGACGCCAGCTGATTGCTGGCGTCCTGGTTTAAC
ACTCGCTCAAAGGAATACAC

Downstream 100 bases:

>100_bases
CCCGAATGCTGCACTGATGATCAAAGGGCCTTCGCAGACTGTGTGAAAACCTAGCAATCTGTCCGGCCCTTTAAGAAAAT
GCTCCGTATCGAAAGATACG

Product: integral membrane protein TerC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MEWLTNPEIWVAFFTLTALEIVLGIDNIIMISILVSRMPKHMQQRTRIFGLGLAMITRILLLLSITWVMRLTADLFEVFG
QGISGRDLILFFGGLFLLWKSSQEMYHALEGEDESDDEPSGKGGNFLYTIIQIAIIDIVFSLDSVITAVGMVSHVPVMVA
AIIVAVLVMMAASGKISEFIDKHPSLKMLALSFLLVVGTVLIAESFDVHVPKGYVYFAMAFSLAVEAINIKMRTAIAKKR
KQQDPVKLRKDIPGQ

Sequences:

>Translated_255_residues
MEWLTNPEIWVAFFTLTALEIVLGIDNIIMISILVSRMPKHMQQRTRIFGLGLAMITRILLLLSITWVMRLTADLFEVFG
QGISGRDLILFFGGLFLLWKSSQEMYHALEGEDESDDEPSGKGGNFLYTIIQIAIIDIVFSLDSVITAVGMVSHVPVMVA
AIIVAVLVMMAASGKISEFIDKHPSLKMLALSFLLVVGTVLIAESFDVHVPKGYVYFAMAFSLAVEAINIKMRTAIAKKR
KQQDPVKLRKDIPGQ
>Mature_255_residues
MEWLTNPEIWVAFFTLTALEIVLGIDNIIMISILVSRMPKHMQQRTRIFGLGLAMITRILLLLSITWVMRLTADLFEVFG
QGISGRDLILFFGGLFLLWKSSQEMYHALEGEDESDDEPSGKGGNFLYTIIQIAIIDIVFSLDSVITAVGMVSHVPVMVA
AIIVAVLVMMAASGKISEFIDKHPSLKMLALSFLLVVGTVLIAESFDVHVPKGYVYFAMAFSLAVEAINIKMRTAIAKKR
KQQDPVKLRKDIPGQ

Specific function: Unknown

COG id: COG0861

COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0053 family [H]

Homologues:

Organism=Escherichia coli, GI1789197, Length=244, Percent_Identity=52.4590163934426, Blast_Score=237, Evalue=5e-64,
Organism=Escherichia coli, GI1788119, Length=252, Percent_Identity=46.4285714285714, Blast_Score=227, Evalue=6e-61,
Organism=Escherichia coli, GI87082033, Length=241, Percent_Identity=46.0580912863071, Blast_Score=209, Evalue=2e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005496 [H]

Pfam domain/function: PF03741 TerC [H]

EC number: NA

Molecular weight: Translated: 28347; Mature: 28347

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWLTNPEIWVAFFTLTALEIVLGIDNIIMISILVSRMPKHMQQRTRIFGLGLAMITRIL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLSITWVMRLTADLFEVFGQGISGRDLILFFGGLFLLWKSSQEMYHALEGEDESDDEPS
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCC
GKGGNFLYTIIQIAIIDIVFSLDSVITAVGMVSHVPVMVAAIIVAVLVMMAASGKISEFI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
DKHPSLKMLALSFLLVVGTVLIAESFDVHVPKGYVYFAMAFSLAVEAINIKMRTAIAKKR
HCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQQDPVKLRKDIPGQ
CCCCCHHHHHCCCCC
>Mature Secondary Structure
MEWLTNPEIWVAFFTLTALEIVLGIDNIIMISILVSRMPKHMQQRTRIFGLGLAMITRIL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLSITWVMRLTADLFEVFGQGISGRDLILFFGGLFLLWKSSQEMYHALEGEDESDDEPS
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCC
GKGGNFLYTIIQIAIIDIVFSLDSVITAVGMVSHVPVMVAAIIVAVLVMMAASGKISEFI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
DKHPSLKMLALSFLLVVGTVLIAESFDVHVPKGYVYFAMAFSLAVEAINIKMRTAIAKKR
HCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQQDPVKLRKDIPGQ
CCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]