Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is tag [H]

Identifier: 77456239

GI number: 77456239

Start: 13907

End: 14464

Strand: Direct

Name: tag [H]

Synonym: Pfl01_0011

Alternate gene names: 77456239

Gene position: 13907-14464 (Clockwise)

Preceding gene: 77456234

Following gene: 77456240

Centisome position: 0.22

GC content: 59.68

Gene sequence:

>558_bases
ATGCCACGCTGCTTTTGGTGCAACGAAGATCCGCTGTACATGGCTTACCACGATCAGGAGTGGGGCACGCCGCTACGCGA
TGCGCAGGGTTTGTTCGAGTTGCTTTTGCTCGAAGGGTTCCAGGCCGGGCTGTCGTGGATCACCGTGCTGCGTAAACGTG
AGCGATATCGCGAGGTGCTGTTCGGCTTCGACGTACAACGTGTGGCGCAGATGAGCGACGCGGAAATCGATGAATTGATG
CTCGATCCGGGGATCATCCGCAACCGCATCAAGCTCAATGCCGCCCGGCGTAATGCCCAGGCGTGGCTGGCGCTGGAGGA
TCCGGTGGCCTTCCTCTGGTCGTTTGTGGATAACCGCCCGGTGATCAATCATTTCAAGGATCGCAGCGAAGTACCGGCCA
TCACCCCGCAAGCCGTGGCCATGAGCAAAGGCTTGAAAAAGGCCGGTTTCACCTTCGTCGGCCCAACCATTTGCTATGCG
CTGATGCAGGCCTCGGGCATGGTCATGGATCACACCCAGGACTGCGACCGCTACGCGCAGCTCGCCAACGGCGGTTAG

Upstream 100 bases:

>100_bases
CTGGCGTAGGCTGGCTCACGAAATTCACCTGTTTCTTGGGCTGCGATTTAAAGAGCGGGAGTATACCCGATTCAGTCGCA
CCTCCACCCCCTGGAGCCTT

Downstream 100 bases:

>100_bases
AATGGCCGCCTCGCGCACAGCACAAGATCAGGAGTGACCTGTGGAAAAGTTTAAAGGCGCCATGCTGGTTGGCGCTCTGC
GGCTGTTTGCCCTGCTTCCG

Product: DNA-3-methyladenine glycosylase I

Products: NA

Alternate protein names: 3-methyladenine-DNA glycosylase I, constitutive; TAG I; DNA-3-methyladenine glycosidase I; DNA-3-methyladenine glycosylase I [H]

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MPRCFWCNEDPLYMAYHDQEWGTPLRDAQGLFELLLLEGFQAGLSWITVLRKRERYREVLFGFDVQRVAQMSDAEIDELM
LDPGIIRNRIKLNAARRNAQAWLALEDPVAFLWSFVDNRPVINHFKDRSEVPAITPQAVAMSKGLKKAGFTFVGPTICYA
LMQASGMVMDHTQDCDRYAQLANGG

Sequences:

>Translated_185_residues
MPRCFWCNEDPLYMAYHDQEWGTPLRDAQGLFELLLLEGFQAGLSWITVLRKRERYREVLFGFDVQRVAQMSDAEIDELM
LDPGIIRNRIKLNAARRNAQAWLALEDPVAFLWSFVDNRPVINHFKDRSEVPAITPQAVAMSKGLKKAGFTFVGPTICYA
LMQASGMVMDHTQDCDRYAQLANGG
>Mature_184_residues
PRCFWCNEDPLYMAYHDQEWGTPLRDAQGLFELLLLEGFQAGLSWITVLRKRERYREVLFGFDVQRVAQMSDAEIDELML
DPGIIRNRIKLNAARRNAQAWLALEDPVAFLWSFVDNRPVINHFKDRSEVPAITPQAVAMSKGLKKAGFTFVGPTICYAL
MQASGMVMDHTQDCDRYAQLANGG

Specific function: Hydrolysis of the deoxyribose N-glycosidic bond to excise 3-methyladenine from the damaged DNA polymer formed by alkylation lesions [H]

COG id: COG2818

COG function: function code L; 3-methyladenine DNA glycosylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789971, Length=182, Percent_Identity=51.0989010989011, Blast_Score=190, Evalue=6e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005019
- InterPro:   IPR011257
- InterPro:   IPR004597 [H]

Pfam domain/function: PF03352 Adenine_glyco [H]

EC number: =3.2.2.20 [H]

Molecular weight: Translated: 21118; Mature: 20986

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRCFWCNEDPLYMAYHDQEWGTPLRDAQGLFELLLLEGFQAGLSWITVLRKRERYREVL
CCCCEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGFDVQRVAQMSDAEIDELMLDPGIIRNRIKLNAARRNAQAWLALEDPVAFLWSFVDNRP
HCCCHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHCCCC
VINHFKDRSEVPAITPQAVAMSKGLKKAGFTFVGPTICYALMQASGMVMDHTQDCDRYAQ
HHHHHHCCCCCCCCCHHHHHHHHCHHHCCCEEECHHHHHHHHHHCCCEECCHHHHHHHHH
LANGG
HHCCC
>Mature Secondary Structure 
PRCFWCNEDPLYMAYHDQEWGTPLRDAQGLFELLLLEGFQAGLSWITVLRKRERYREVL
CCCEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGFDVQRVAQMSDAEIDELMLDPGIIRNRIKLNAARRNAQAWLALEDPVAFLWSFVDNRP
HCCCHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHCCCC
VINHFKDRSEVPAITPQAVAMSKGLKKAGFTFVGPTICYALMQASGMVMDHTQDCDRYAQ
HHHHHHCCCCCCCCCHHHHHHHHCHHHCCCEEECHHHHHHHHHHCCCEECCHHHHHHHHH
LANGG
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3536912; 3520491; 8041620; 9278503 [H]