| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is lpxP [H]
Identifier: 77456240
GI number: 77456240
Start: 14505
End: 15392
Strand: Direct
Name: lpxP [H]
Synonym: Pfl01_0012
Alternate gene names: 77456240
Gene position: 14505-15392 (Clockwise)
Preceding gene: 77456239
Following gene: 77456246
Centisome position: 0.23
GC content: 62.27
Gene sequence:
>888_bases GTGGAAAAGTTTAAAGGCGCCATGCTGGTTGGCGCTCTGCGGCTGTTTGCCCTGCTTCCGTGGCGGGCCGTGCAGGCCGT GGGTTCGGCGATCGGCTGGATCATGTGGAAAACCCCCAACCGTTCCCGCGATGTGGTGCGGATCAACCTGGCCAAATGTT TTCCACAGATGGACCCGGCCGAACGCGAGCGTCTGGTCGGCCAGACCCTGAAAGACATCGGCAAGTCCCTGACCGAAAGC GCCTGCGCCTGGATCTGGCCCGCTCAGCGTTCCATCGACCTGGTGCGCGAAGTCGAGGGCCTCGAGGTGCTGAAAGACGC GCTGGCCTCGGGCAAGGGCGTGGTCGGCATCACCAGCCACCTGGGCAACTGGGAAGTGCTCAACCACTTCTATTGCAGTC AGTGCAAACCGATCATTTTCTACCGGCCGCCGAAGCTCAAGGCTGTGGATGAATTGCTGCGCAAGCAGCGCGTGCAATTG GGCAACAAAGTCGCCGCATCGACCAAGGAAGGCATCCTCAGTGTCATCAAGGAAGTGCGCAAGGGCGGTCAGGTGGGGAT TCCTGCGGACCCGGAACCGGCCGAATCCGCCGGGATCTTCGTGCCGTTCTTCGCCACCCAGGCCCTGACCAGCAAGTTCG TGCCGAACATGCTCGCCGGCGGCAAAGCCGTCGGGGTGTTCCTGCATGCCCTGCGTCTGCCGGACGGTTCCGGCTACAAG GTGATCCTCGAAGCGGCGCCGGAAGCGATGTACAGCACCGACACCGAAACCTCCTGCGCAGCGATGAGTAAAGTCGTCGA GCGTTACGTGGCGGCTTATCCGAGCCAGTACATGTGGAGCATGAAGCGCTTCAAGAAGCGTCCGCCGGGTGAGGCGCGCT GGTACTGA
Upstream 100 bases:
>100_bases ATGGTCATGGATCACACCCAGGACTGCGACCGCTACGCGCAGCTCGCCAACGGCGGTTAGAATGGCCGCCTCGCGCACAG CACAAGATCAGGAGTGACCT
Downstream 100 bases:
>100_bases TCGGCGATGTGCAATTGTGGATAACCCGACGATAAGGGTTATCCACAGCCGTCACGGTTTCTGCCGATCGAGCTTCTTCA GAAACACCGTCATTTCCTTC
Product: lipid A biosynthesis lauroyl acyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MEKFKGAMLVGALRLFALLPWRAVQAVGSAIGWIMWKTPNRSRDVVRINLAKCFPQMDPAERERLVGQTLKDIGKSLTES ACAWIWPAQRSIDLVREVEGLEVLKDALASGKGVVGITSHLGNWEVLNHFYCSQCKPIIFYRPPKLKAVDELLRKQRVQL GNKVAASTKEGILSVIKEVRKGGQVGIPADPEPAESAGIFVPFFATQALTSKFVPNMLAGGKAVGVFLHALRLPDGSGYK VILEAAPEAMYSTDTETSCAAMSKVVERYVAAYPSQYMWSMKRFKKRPPGEARWY
Sequences:
>Translated_295_residues MEKFKGAMLVGALRLFALLPWRAVQAVGSAIGWIMWKTPNRSRDVVRINLAKCFPQMDPAERERLVGQTLKDIGKSLTES ACAWIWPAQRSIDLVREVEGLEVLKDALASGKGVVGITSHLGNWEVLNHFYCSQCKPIIFYRPPKLKAVDELLRKQRVQL GNKVAASTKEGILSVIKEVRKGGQVGIPADPEPAESAGIFVPFFATQALTSKFVPNMLAGGKAVGVFLHALRLPDGSGYK VILEAAPEAMYSTDTETSCAAMSKVVERYVAAYPSQYMWSMKRFKKRPPGEARWY >Mature_295_residues MEKFKGAMLVGALRLFALLPWRAVQAVGSAIGWIMWKTPNRSRDVVRINLAKCFPQMDPAERERLVGQTLKDIGKSLTES ACAWIWPAQRSIDLVREVEGLEVLKDALASGKGVVGITSHLGNWEVLNHFYCSQCKPIIFYRPPKLKAVDELLRKQRVQL GNKVAASTKEGILSVIKEVRKGGQVGIPADPEPAESAGIFVPFFATQALTSKFVPNMLAGGKAVGVFLHALRLPDGSGYK VILEAAPEAMYSTDTETSCAAMSKVVERYVAAYPSQYMWSMKRFKKRPPGEARWY
Specific function: Unknown
COG id: COG1560
COG function: function code M; Lauroyl/myristoyl acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the htrB/msbB family [H]
Homologues:
Organism=Escherichia coli, GI87082094, Length=290, Percent_Identity=29.6551724137931, Blast_Score=131, Evalue=5e-32, Organism=Escherichia coli, GI1787292, Length=283, Percent_Identity=31.8021201413428, Blast_Score=130, Evalue=7e-32, Organism=Escherichia coli, GI1788161, Length=297, Percent_Identity=24.5791245791246, Blast_Score=73, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004960 - InterPro: IPR011920 [H]
Pfam domain/function: PF03279 Lip_A_acyltrans [H]
EC number: 2.3.1.-
Molecular weight: Translated: 32643; Mature: 32643
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKFKGAMLVGALRLFALLPWRAVQAVGSAIGWIMWKTPNRSRDVVRINLAKCFPQMDPA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEEEHHHHCCCCCHH ERERLVGQTLKDIGKSLTESACAWIWPAQRSIDLVREVEGLEVLKDALASGKGVVGITSH HHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHC LGNWEVLNHFYCSQCKPIIFYRPPKLKAVDELLRKQRVQLGNKVAASTKEGILSVIKEVR CCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH KGGQVGIPADPEPAESAGIFVPFFATQALTSKFVPNMLAGGKAVGVFLHALRLPDGSGYK CCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCE VILEAAPEAMYSTDTETSCAAMSKVVERYVAAYPSQYMWSMKRFKKRPPGEARWY EEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MEKFKGAMLVGALRLFALLPWRAVQAVGSAIGWIMWKTPNRSRDVVRINLAKCFPQMDPA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEEEHHHHCCCCCHH ERERLVGQTLKDIGKSLTESACAWIWPAQRSIDLVREVEGLEVLKDALASGKGVVGITSH HHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHC LGNWEVLNHFYCSQCKPIIFYRPPKLKAVDELLRKQRVQLGNKVAASTKEGILSVIKEVR CCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH KGGQVGIPADPEPAESAGIFVPFFATQALTSKFVPNMLAGGKAVGVFLHALRLPDGSGYK CCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCE VILEAAPEAMYSTDTETSCAAMSKVVERYVAAYPSQYMWSMKRFKKRPPGEARWY EEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]