| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 255961277
Identifier: 255961277
GI number: 255961277
Start: 1740453
End: 1742309
Strand: Reverse
Name: 255961277
Synonym: Pfl01_1554
Alternate gene names: NA
Gene position: 1742309-1740453 (Counterclockwise)
Preceding gene: 255961276
Following gene: 77457780
Centisome position: 27.06
GC content: 52.4
Gene sequence:
>1857_bases ATGAGTACTACAGCCGAACCAATTGCGCGGAATGTCATGATCATTGGAGAGCCGGTTATTGGTGGTTTTGTACGCGGCAG CTATCGCTATGACAATGCTGACGAAAACCCTGAAGGAGCCTCTCGTTATCAATGGTATCTCGACAACGTAAAAATCGAGG AACCAGAAGGCGTAGCCATCGATTTGAAGATCAAATCCGGGTACAGCGCAAGAACAATCGTATTCGCTGTTACTCCGGTG TCCGCTATTGGTGAAACCGGAAAGGAAACCCGCTCTGTCGCCAAAACTGTGGCCCCTGACTTTCAAGGCATCACTCGGGA AGAAAATGAGAACAGTTTTCTCAAGCAATGGGGAAATTTCTCTGCCCATGTTCCTGAACCTCCTGATCGGGTATTCGTCT CGACAGGAGGCGCTTTTGGCCTGATTGATCCAGATACGCAGGATATTTACTTCGAGGGGCAGACGGGTTGGGGGCTGCCG GTTCCACCCGACATCATCAACTTTCTGAAAAACAACCCGGCCACTCGAATGTTTTCAACAGAGAAGGATTTTGCCGCACT GGTAAACAACGGACCGAGCAATCAGCTACTGGTCTGGGGAGCCAATATCCCGGCCAGCCACTCCGTGAGACTGACTGATA TCAAGTCGGTTTATAGCAACCGAGTGTGTTTCGCTTTCATTTATAAAGATCCAACAGGTGATCAAAACAGAATAGGCGCT ATTGGTTTGAAAGGCTCCGGCGATACTATTCCGGAGCTGATCCAACGAGCCCTTTGGTTTGATGAACCGGTCGCCATCTA CGCCACGGAAAATGCTTTTGCCGTTCGAACTCAAAACGGCAAAGTCTATGCGTGGGGCAATCCTAATAATGGCGGCGCGA TCAACGCAGATGCCCAAGTGCAACTCGACAGTATCTTCGTAGAACGAATTATTGCGGCGGCGGCTGCGTTTTGTGCCATC GGGCGTAATGGCGAAATTGTTACATGGGGAAAGGCAGCCGATGGAGGTGCCATTCCGTCGGGCAAGTTGGATACGATCCT CAGTGACGGCGGAGTGAATTCAGTCACAGCATCTACCACAGCATTTTGCGCGATCACCCGTAACAGACGTAAGGCTGTGA GTTGGGGACTCAATGGCGAGGGGGGATTGATGTCTGAATCAGCTTCCCTAATCGCGGCGCGTGGCGGTGTACTGTTATGC AAAGCAACCCGCTGGGCATTCTGCATTATCACTGAACGCGGGGAGGCAGAAGCTTGGGGAGCGCAACGTTATGGGGGCGC CTCCATCACTGGAGCCACTCGAAGCGAGATTGAAGCAGCCGTCAAAGATATGCAGCCAATGCCCGAAGACGCTCGCGGTC ATGTTGGCAATCGGGCCATTACAGTTCCAGGAATACTCAGTCTTTATTCCAATGATTTGAGCTTCTTTCTTTTGAGCCAG CACGACGACGGTAGAACCCGGGCTATAGTGGTCTGGGGAATGAATACTCACGGCGGAGCAATCACGCCGGGCGTTCGTCA GGCGTTGATGGCTAGCAAGATTACTGGCGTCTACTGCACAAATGGCGCGTATGGCGTTGTGGCGACTCAGGGGGGAGTGT ATGGCGCGGTCATCGTCTGGGGAGCAACTCTGGCGATGGAAGATGCAGGGGAAATTCCACCGGAATTGGCCGAGTACCTC AGCGGAGATGTAGTGGAGCTTTACTCAATCAAACGTTACCCGTTTTACCAGGCACCGCCTCCCGATCCACCGCCTATTGA TCCGTCATTCGCGGCAAGACGTCGAGACGGAAGTTACGTGCTTTGGGGCGGCAACGTTAAGAATCAGTACTACAAGCCAG AACCCAAGCGGATATAG
Upstream 100 bases:
>100_bases ATGTGACGTGGGGTGCCCACGTCAAACAAGAAGAGTTTGAGCCAGGACGCAGTTGAGCTTGTTCAACCGACAGACTATTT GTACGTTGAGGAGTATTGCT
Downstream 100 bases:
>100_bases AGGACACTGAGGAGCTATAAACACTAGTTCGAATGCCTCCCGGCACCGTACCCGTCCAGAAATTGAACGGGCACGGTTTT ATCCGGTGGTGAGCTCCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 618; Mature: 617
Protein sequence:
>618_residues MSTTAEPIARNVMIIGEPVIGGFVRGSYRYDNADENPEGASRYQWYLDNVKIEEPEGVAIDLKIKSGYSARTIVFAVTPV SAIGETGKETRSVAKTVAPDFQGITREENENSFLKQWGNFSAHVPEPPDRVFVSTGGAFGLIDPDTQDIYFEGQTGWGLP VPPDIINFLKNNPATRMFSTEKDFAALVNNGPSNQLLVWGANIPASHSVRLTDIKSVYSNRVCFAFIYKDPTGDQNRIGA IGLKGSGDTIPELIQRALWFDEPVAIYATENAFAVRTQNGKVYAWGNPNNGGAINADAQVQLDSIFVERIIAAAAAFCAI GRNGEIVTWGKAADGGAIPSGKLDTILSDGGVNSVTASTTAFCAITRNRRKAVSWGLNGEGGLMSESASLIAARGGVLLC KATRWAFCIITERGEAEAWGAQRYGGASITGATRSEIEAAVKDMQPMPEDARGHVGNRAITVPGILSLYSNDLSFFLLSQ HDDGRTRAIVVWGMNTHGGAITPGVRQALMASKITGVYCTNGAYGVVATQGGVYGAVIVWGATLAMEDAGEIPPELAEYL SGDVVELYSIKRYPFYQAPPPDPPPIDPSFAARRRDGSYVLWGGNVKNQYYKPEPKRI
Sequences:
>Translated_618_residues MSTTAEPIARNVMIIGEPVIGGFVRGSYRYDNADENPEGASRYQWYLDNVKIEEPEGVAIDLKIKSGYSARTIVFAVTPV SAIGETGKETRSVAKTVAPDFQGITREENENSFLKQWGNFSAHVPEPPDRVFVSTGGAFGLIDPDTQDIYFEGQTGWGLP VPPDIINFLKNNPATRMFSTEKDFAALVNNGPSNQLLVWGANIPASHSVRLTDIKSVYSNRVCFAFIYKDPTGDQNRIGA IGLKGSGDTIPELIQRALWFDEPVAIYATENAFAVRTQNGKVYAWGNPNNGGAINADAQVQLDSIFVERIIAAAAAFCAI GRNGEIVTWGKAADGGAIPSGKLDTILSDGGVNSVTASTTAFCAITRNRRKAVSWGLNGEGGLMSESASLIAARGGVLLC KATRWAFCIITERGEAEAWGAQRYGGASITGATRSEIEAAVKDMQPMPEDARGHVGNRAITVPGILSLYSNDLSFFLLSQ HDDGRTRAIVVWGMNTHGGAITPGVRQALMASKITGVYCTNGAYGVVATQGGVYGAVIVWGATLAMEDAGEIPPELAEYL SGDVVELYSIKRYPFYQAPPPDPPPIDPSFAARRRDGSYVLWGGNVKNQYYKPEPKRI >Mature_617_residues STTAEPIARNVMIIGEPVIGGFVRGSYRYDNADENPEGASRYQWYLDNVKIEEPEGVAIDLKIKSGYSARTIVFAVTPVS AIGETGKETRSVAKTVAPDFQGITREENENSFLKQWGNFSAHVPEPPDRVFVSTGGAFGLIDPDTQDIYFEGQTGWGLPV PPDIINFLKNNPATRMFSTEKDFAALVNNGPSNQLLVWGANIPASHSVRLTDIKSVYSNRVCFAFIYKDPTGDQNRIGAI GLKGSGDTIPELIQRALWFDEPVAIYATENAFAVRTQNGKVYAWGNPNNGGAINADAQVQLDSIFVERIIAAAAAFCAIG RNGEIVTWGKAADGGAIPSGKLDTILSDGGVNSVTASTTAFCAITRNRRKAVSWGLNGEGGLMSESASLIAARGGVLLCK ATRWAFCIITERGEAEAWGAQRYGGASITGATRSEIEAAVKDMQPMPEDARGHVGNRAITVPGILSLYSNDLSFFLLSQH DDGRTRAIVVWGMNTHGGAITPGVRQALMASKITGVYCTNGAYGVVATQGGVYGAVIVWGATLAMEDAGEIPPELAEYLS GDVVELYSIKRYPFYQAPPPDPPPIDPSFAARRRDGSYVLWGGNVKNQYYKPEPKRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66414; Mature: 66283
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTAEPIARNVMIIGEPVIGGFVRGSYRYDNADENPEGASRYQWYLDNVKIEEPEGVAI CCCCCCCHHCCEEEEECCCCCCEEECCEECCCCCCCCCCCCEEEEEECCEEEECCCCEEE DLKIKSGYSARTIVFAVTPVSAIGETGKETRSVAKTVAPDFQGITREENENSFLKQWGNF EEEECCCCCEEEEEEEECCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCC SAHVPEPPDRVFVSTGGAFGLIDPDTQDIYFEGQTGWGLPVPPDIINFLKNNPATRMFST CCCCCCCCCEEEEECCCEEEECCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCEEECC EKDFAALVNNGPSNQLLVWGANIPASHSVRLTDIKSVYSNRVCFAFIYKDPTGDQNRIGA CHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEHHHHHCCCEEEEEEEECCCCCCCCEEE IGLKGSGDTIPELIQRALWFDEPVAIYATENAFAVRTQNGKVYAWGNPNNGGAINADAQV EEECCCCCHHHHHHHHHHCCCCCEEEEEECCEEEEEECCCEEEECCCCCCCCEECCCCEE QLDSIFVERIIAAAAAFCAIGRNGEIVTWGKAADGGAIPSGKLDTILSDGGVNSVTASTT EHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCEEECCCCCCCEECCCE AFCAITRNRRKAVSWGLNGEGGLMSESASLIAARGGVLLCKATRWAFCIITERGEAEAWG EEEEEECCCCEEEECCCCCCCCCCCCCCCEEEECCCEEEEEECCEEEEEEEECCCCCCCC AQRYGGASITGATRSEIEAAVKDMQPMPEDARGHVGNRAITVPGILSLYSNDLSFFLLSQ CCCCCCCEECCCCHHHHHHHHHHCCCCCCHHCCCCCCEEEECCHHHHHHCCCEEEEEEEE HDDGRTRAIVVWGMNTHGGAITPGVRQALMASKITGVYCTNGAYGVVATQGGVYGAVIVW CCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCEEEECCCEEEEEEECCCCEEEEEEE GATLAMEDAGEIPPELAEYLSGDVVELYSIKRYPFYQAPPPDPPPIDPSFAARRRDGSYV CCCEEECCCCCCCHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCEE LWGGNVKNQYYKPEPKRI EECCCCCCCCCCCCCCCC >Mature Secondary Structure STTAEPIARNVMIIGEPVIGGFVRGSYRYDNADENPEGASRYQWYLDNVKIEEPEGVAI CCCCCCHHCCEEEEECCCCCCEEECCEECCCCCCCCCCCCEEEEEECCEEEECCCCEEE DLKIKSGYSARTIVFAVTPVSAIGETGKETRSVAKTVAPDFQGITREENENSFLKQWGNF EEEECCCCCEEEEEEEECCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCC SAHVPEPPDRVFVSTGGAFGLIDPDTQDIYFEGQTGWGLPVPPDIINFLKNNPATRMFST CCCCCCCCCEEEEECCCEEEECCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCEEECC EKDFAALVNNGPSNQLLVWGANIPASHSVRLTDIKSVYSNRVCFAFIYKDPTGDQNRIGA CHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEHHHHHCCCEEEEEEEECCCCCCCCEEE IGLKGSGDTIPELIQRALWFDEPVAIYATENAFAVRTQNGKVYAWGNPNNGGAINADAQV EEECCCCCHHHHHHHHHHCCCCCEEEEEECCEEEEEECCCEEEECCCCCCCCEECCCCEE QLDSIFVERIIAAAAAFCAIGRNGEIVTWGKAADGGAIPSGKLDTILSDGGVNSVTASTT EHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCEEECCCCCCCEECCCE AFCAITRNRRKAVSWGLNGEGGLMSESASLIAARGGVLLCKATRWAFCIITERGEAEAWG EEEEEECCCCEEEECCCCCCCCCCCCCCCEEEECCCEEEEEECCEEEEEEEECCCCCCCC AQRYGGASITGATRSEIEAAVKDMQPMPEDARGHVGNRAITVPGILSLYSNDLSFFLLSQ CCCCCCCEECCCCHHHHHHHHHHCCCCCCHHCCCCCCEEEECCHHHHHHCCCEEEEEEEE HDDGRTRAIVVWGMNTHGGAITPGVRQALMASKITGVYCTNGAYGVVATQGGVYGAVIVW CCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCEEEECCCEEEEEEECCCCEEEEEEE GATLAMEDAGEIPPELAEYLSGDVVELYSIKRYPFYQAPPPDPPPIDPSFAARRRDGSYV CCCEEECCCCCCCHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCEE LWGGNVKNQYYKPEPKRI EECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA