| Definition | Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence. |
|---|---|
| Accession | NC_007491 |
| Length | 271,577 |
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The map label for this gene is 77454619
Identifier: 77454619
GI number: 77454619
Start: 57941
End: 58567
Strand: Direct
Name: 77454619
Synonym: pREL1_0052
Alternate gene names: NA
Gene position: 57941-58567 (Clockwise)
Preceding gene: 77454618
Following gene: 77454620
Centisome position: 21.34
GC content: 59.17
Gene sequence:
>627_bases ATGGCCCACAACAGAATTCGACGAACCACAGCAGCAGCAGTCGCAGCTGTTGCCCTACTAGCCGGCGTCGCAGCTTGTTC CAGCAATTCCGACGAGCCGGACGTCACTCTCACTGCGACCGGAAACCCCGCTTTCGATGGTCCAGACGGCAAGACCGAGG CGAAGACGCCCGACGAGCAAGCGCGGAGCCAAGCGATCGCTAAGGTCAACGAGTTTTATGCTGCCCTCGGAAGCATTGAA GCTGACCCAACAGCCTCTGTGGATGCGATCAGCGGTGTGGCTGGCGACCCAGTCTTGAACGACCGAGTCGGGGACATCAT GCTTCGACGGTCACAGGGCATCACCAGTACCGGAGCTATTTCCGTCATCAAATCCTCGGTGACGGATCTGAGCGCACCGG TAGATGATCAGGGAAAACCCCGCGCGGAAGCCGCCTGGGTTCACGTTCAGGCCTGCACTGATATCTCCGGCTGGAATGCC GTATTTCCGGACGGATCAAGTGCGATGAAGCCCGACCGCGGCCAGTTCGAGTCCACCAACATCACCGTTCGGAACCCCGC GTGGCCTGATTCGAATGGCTGGCGCGTCACAAGTCAAACAGTTGAGAAGGTGCAATCATGCGACTAG
Upstream 100 bases:
>100_bases CGAACCCGTCATGGCCCGACCCAGCAGGATGGAGAGTCACAGCCGACTACACACAACCCGGAACACCCTGCAGCGCCGGA AGCTTCTAGGAGACAACAAC
Downstream 100 bases:
>100_bases CAATGAGAATTTTCGCCACTGCGACACTGGTTTGCGGCGTTCTGGTCACGGGGAGTCAGTCAGCGTTGGCGCAGCCAGGC GTAGGTGGAGGTGGAGTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MAHNRIRRTTAAAVAAVALLAGVAACSSNSDEPDVTLTATGNPAFDGPDGKTEAKTPDEQARSQAIAKVNEFYAALGSIE ADPTASVDAISGVAGDPVLNDRVGDIMLRRSQGITSTGAISVIKSSVTDLSAPVDDQGKPRAEAAWVHVQACTDISGWNA VFPDGSSAMKPDRGQFESTNITVRNPAWPDSNGWRVTSQTVEKVQSCD
Sequences:
>Translated_208_residues MAHNRIRRTTAAAVAAVALLAGVAACSSNSDEPDVTLTATGNPAFDGPDGKTEAKTPDEQARSQAIAKVNEFYAALGSIE ADPTASVDAISGVAGDPVLNDRVGDIMLRRSQGITSTGAISVIKSSVTDLSAPVDDQGKPRAEAAWVHVQACTDISGWNA VFPDGSSAMKPDRGQFESTNITVRNPAWPDSNGWRVTSQTVEKVQSCD >Mature_207_residues AHNRIRRTTAAAVAAVALLAGVAACSSNSDEPDVTLTATGNPAFDGPDGKTEAKTPDEQARSQAIAKVNEFYAALGSIEA DPTASVDAISGVAGDPVLNDRVGDIMLRRSQGITSTGAISVIKSSVTDLSAPVDDQGKPRAEAAWVHVQACTDISGWNAV FPDGSSAMKPDRGQFESTNITVRNPAWPDSNGWRVTSQTVEKVQSCD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21655; Mature: 21524
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHNRIRRTTAAAVAAVALLAGVAACSSNSDEPDVTLTATGNPAFDGPDGKTEAKTPDEQ CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHH ARSQAIAKVNEFYAALGSIEADPTASVDAISGVAGDPVLNDRVGDIMLRRSQGITSTGAI HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHH SVIKSSVTDLSAPVDDQGKPRAEAAWVHVQACTDISGWNAVFPDGSSAMKPDRGQFESTN HHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCC ITVRNPAWPDSNGWRVTSQTVEKVQSCD EEECCCCCCCCCCCEEHHHHHHHHHCCC >Mature Secondary Structure AHNRIRRTTAAAVAAVALLAGVAACSSNSDEPDVTLTATGNPAFDGPDGKTEAKTPDEQ CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHH ARSQAIAKVNEFYAALGSIEADPTASVDAISGVAGDPVLNDRVGDIMLRRSQGITSTGAI HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHH SVIKSSVTDLSAPVDDQGKPRAEAAWVHVQACTDISGWNAVFPDGSSAMKPDRGQFESTN HHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCC ITVRNPAWPDSNGWRVTSQTVEKVQSCD EEECCCCCCCCCCCEEHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA