| Definition | Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence. |
|---|---|
| Accession | NC_007491 |
| Length | 271,577 |
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The map label for this gene is 77454618
Identifier: 77454618
GI number: 77454618
Start: 57363
End: 57929
Strand: Direct
Name: 77454618
Synonym: pREL1_0051
Alternate gene names: NA
Gene position: 57363-57929 (Clockwise)
Preceding gene: 77454617
Following gene: 77454619
Centisome position: 21.12
GC content: 61.55
Gene sequence:
>567_bases ATGAACCGCCGCATCGCAGCCATGCTCACCCTCACTGCGGCGGCCTGCCTGACCGCAAGCTGCAGCATCCTCAGCCCGGA GCCCGGCACCCTCAACACCAGCAGCGGCCCGACCTTTACCGGCCCCCCTGGATCGGGAAAATCACCTGAACAGCAAGCAG GAGAAGGTGCCCTCGCCAAGATCAGCGAGTACTACACCGTGCTCGCACGATTGAACTCCGACCCCGCTGCCCCGCTCTCT GACCTCGATGCCGTCGCGGCAGGCCGCTTCCTCGACAGGACCAAGAAAGAGATCACAACCAGCCGCAACGGAAACCCGAC GCCACCAAGCGATCTCAAAGTTCTCAAGAACGTGATTACCAAACACGACATCCCCATCGACGAGACCGGCGCACCGACAG CGGGAACTGCCACGCTCCAAATGGACGTCTGCATCAGCAAGCCTGTGGACAAACTCGAACTCGGAAAACCGATCCTGACG AACCCGTCATGGCCCGACCCAGCAGGATGGAGAGTCACAGCCGACTACACACAACCCGGAACACCCTGCAGCGCCGGAAG CTTCTAG
Upstream 100 bases:
>100_bases AAAGCGAACTCGACGAACTGCAAGTCGACGCACACCCGGAGACCAACGAACTCCTCAGACAGCTCGACACCACCACCGAC TACCGCATCGGAGCCGCATC
Downstream 100 bases:
>100_bases GAGACAACAACATGGCCCACAACAGAATTCGACGAACCACAGCAGCAGCAGTCGCAGCTGTTGCCCTACTAGCCGGCGTC GCAGCTTGTTCCAGCAATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MNRRIAAMLTLTAAACLTASCSILSPEPGTLNTSSGPTFTGPPGSGKSPEQQAGEGALAKISEYYTVLARLNSDPAAPLS DLDAVAAGRFLDRTKKEITTSRNGNPTPPSDLKVLKNVITKHDIPIDETGAPTAGTATLQMDVCISKPVDKLELGKPILT NPSWPDPAGWRVTADYTQPGTPCSAGSF
Sequences:
>Translated_188_residues MNRRIAAMLTLTAAACLTASCSILSPEPGTLNTSSGPTFTGPPGSGKSPEQQAGEGALAKISEYYTVLARLNSDPAAPLS DLDAVAAGRFLDRTKKEITTSRNGNPTPPSDLKVLKNVITKHDIPIDETGAPTAGTATLQMDVCISKPVDKLELGKPILT NPSWPDPAGWRVTADYTQPGTPCSAGSF >Mature_188_residues MNRRIAAMLTLTAAACLTASCSILSPEPGTLNTSSGPTFTGPPGSGKSPEQQAGEGALAKISEYYTVLARLNSDPAAPLS DLDAVAAGRFLDRTKKEITTSRNGNPTPPSDLKVLKNVITKHDIPIDETGAPTAGTATLQMDVCISKPVDKLELGKPILT NPSWPDPAGWRVTADYTQPGTPCSAGSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19564; Mature: 19564
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRRIAAMLTLTAAACLTASCSILSPEPGTLNTSSGPTFTGPPGSGKSPEQQAGEGALAK CCCHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCEECCCCCCCCCCHHHHCCCHHHH ISEYYTVLARLNSDPAAPLSDLDAVAAGRFLDRTKKEITTSRNGNPTPPSDLKVLKNVIT HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH KHDIPIDETGAPTAGTATLQMDVCISKPVDKLELGKPILTNPSWPDPAGWRVTADYTQPG HCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCEEEECCCCCC TPCSAGSF CCCCCCCC >Mature Secondary Structure MNRRIAAMLTLTAAACLTASCSILSPEPGTLNTSSGPTFTGPPGSGKSPEQQAGEGALAK CCCHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCEECCCCCCCCCCHHHHCCCHHHH ISEYYTVLARLNSDPAAPLSDLDAVAAGRFLDRTKKEITTSRNGNPTPPSDLKVLKNVIT HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH KHDIPIDETGAPTAGTATLQMDVCISKPVDKLELGKPILTNPSWPDPAGWRVTADYTQPG HCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCEEEECCCCCC TPCSAGSF CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA