| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is ordL3 [H]
Identifier: 76819544
GI number: 76819544
Start: 686142
End: 687443
Strand: Direct
Name: ordL3 [H]
Synonym: BURPS1710b_A0501
Alternate gene names: 76819544
Gene position: 686142-687443 (Clockwise)
Preceding gene: 76817786
Following gene: 76818956
Centisome position: 21.56
GC content: 73.12
Gene sequence:
>1302_bases ATGCAGAACTACTACGAAGCCACGGTCACGCGCACGCCCTACCCCGCGCTCGCCGAACGCATCGATACCGACGTGTGCAT CGTCGGCGGCGGCCTGGCCGGCCTGTCGACAGCCCTCGGGCTCGTCGAGCGCGGCGTGCGCGACATTGCGCTGCTCGACG CGCAAACGGTCGGCTTCGGCGCGTCGGGCCGCAACGGCGGCTTCGTGTTCGGCGGCTATAGCCTCGACAACGCGGACCTG CTGCGCACGCTCGGCCCCGAGTCCGCCCGCGCGCTCTATCGCCTGACGATCGACGCGGTCGAGCTGATCCGCGCGCGCGC CGCGCGCTACGGCATCGATTGCGAACTCGTCGACGGCGGCGTGATCCTCGCGAACTGGTTCGACGATCCGGCGCGCCTTT GCGCGCCGCGCAAGCTGATGAAGGAGGCGTTCGGCGTCGACTGGGAGCCGCTCGATGAACGCGCACTGCGCACGCGGCTG AAGACGGACCGCTATCGCGGCGGCCTCTTCGAGCGCAACGCGTTCCACTTCCATCCGCTGAAGTACGTGCTCGGCGTCGC GGCCGCGGCCGCGCAGGGCGGCGCGCGGATCCACGAGCATTCGGCCGCGCGCGCGATTCGCCGCGACGGCGCGGGTTTTG TCGTCGCGACCGACGGCGGCGCGGTGCGCGCGCGCCGCGTGGTGTTCGCGGGCGGCGGCTATGCGCGCGGCGTGTATCCG CGCATCGAGCGCGCGGTGCTGCCGATCGCGACCTACGTGATCGCGACCGAGCCGCTCGGCGCGCGGCTCGCCGACGCGAT CGCGTGCGAGGCGGCCGTCTACGACACCCGCTTCGCGTTCGACTACTACCGGCCGCTCGCCGACACGCGAATTCTGTGGG GCGGCCGCATTTCGGTGCTCGAACGCGGGCCGGAAGCAATCGCGCGGCTGCTCAGGCGCGACCTGCTGCGCGTTTATCCG CAACTGCGCGATGTCGCCGTGCAGTTCGCGTGGGGCGGGCTCATGAGCTACGCGCGCCACAAGATGCCGCAGATCGGCCG CGATGCGCACGGCGTCTGGCACGCGGTCGGCTTCGGCGGCCACGGCATGGCGCCGACGACGGTGGCGGGCGAGGTGCTCG CGGCGGCGCTCGCGGGCGAGCGGCCCGTGCCGGACGGCTTCGCGCGGTTCGGCCTCGCGCGCACGTTCGGGCTCGCGGGG CTCGCCGCCGCGCAGCTCACGTACAGCGCGTACGAGGCGCGCGACGCGCTCGCCGCGCGCCGCTGCGCACGCGCCGGCCA GCCCTTTCGTCAGCGCCTTTAG
Upstream 100 bases:
>100_bases GTCCATCCGTGCAGACGCGGCTTCCTCGCAGGCAAGACAACCGATACGATAATCCGCTCATCCGCTCTCGAGCGGCCCGC ACGGTCCCAACGACATCCGC
Downstream 100 bases:
>100_bases AGCCCGGAGTCGGGCAAAAGCCGCGTGGGGCGCGTGCTAGAATGCGCCGACCATGCCGCCGTCCGATCACGCCAAAATGA AACAAGGAAGCAAGGCCGCA
Product: oxidoreductase, FAD-binding
Products: NA
Alternate protein names: Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase [H]
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MQNYYEATVTRTPYPALAERIDTDVCIVGGGLAGLSTALGLVERGVRDIALLDAQTVGFGASGRNGGFVFGGYSLDNADL LRTLGPESARALYRLTIDAVELIRARAARYGIDCELVDGGVILANWFDDPARLCAPRKLMKEAFGVDWEPLDERALRTRL KTDRYRGGLFERNAFHFHPLKYVLGVAAAAAQGGARIHEHSAARAIRRDGAGFVVATDGGAVRARRVVFAGGGYARGVYP RIERAVLPIATYVIATEPLGARLADAIACEAAVYDTRFAFDYYRPLADTRILWGGRISVLERGPEAIARLLRRDLLRVYP QLRDVAVQFAWGGLMSYARHKMPQIGRDAHGVWHAVGFGGHGMAPTTVAGEVLAAALAGERPVPDGFARFGLARTFGLAG LAAAQLTYSAYEARDALAARRCARAGQPFRQRL
Sequences:
>Translated_433_residues MQNYYEATVTRTPYPALAERIDTDVCIVGGGLAGLSTALGLVERGVRDIALLDAQTVGFGASGRNGGFVFGGYSLDNADL LRTLGPESARALYRLTIDAVELIRARAARYGIDCELVDGGVILANWFDDPARLCAPRKLMKEAFGVDWEPLDERALRTRL KTDRYRGGLFERNAFHFHPLKYVLGVAAAAAQGGARIHEHSAARAIRRDGAGFVVATDGGAVRARRVVFAGGGYARGVYP RIERAVLPIATYVIATEPLGARLADAIACEAAVYDTRFAFDYYRPLADTRILWGGRISVLERGPEAIARLLRRDLLRVYP QLRDVAVQFAWGGLMSYARHKMPQIGRDAHGVWHAVGFGGHGMAPTTVAGEVLAAALAGERPVPDGFARFGLARTFGLAG LAAAQLTYSAYEARDALAARRCARAGQPFRQRL >Mature_433_residues MQNYYEATVTRTPYPALAERIDTDVCIVGGGLAGLSTALGLVERGVRDIALLDAQTVGFGASGRNGGFVFGGYSLDNADL LRTLGPESARALYRLTIDAVELIRARAARYGIDCELVDGGVILANWFDDPARLCAPRKLMKEAFGVDWEPLDERALRTRL KTDRYRGGLFERNAFHFHPLKYVLGVAAAAAQGGARIHEHSAARAIRRDGAGFVVATDGGAVRARRVVFAGGGYARGVYP RIERAVLPIATYVIATEPLGARLADAIACEAAVYDTRFAFDYYRPLADTRILWGGRISVLERGPEAIARLLRRDLLRVYP QLRDVAVQFAWGGLMSYARHKMPQIGRDAHGVWHAVGFGGHGMAPTTVAGEVLAAALAGERPVPDGFARFGLARTFGLAG LAAAQLTYSAYEARDALAARRCARAGQPFRQRL
Specific function: Involved in the breakdown of putrescine via the oxidation of L-glutamylputrescine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787559, Length=392, Percent_Identity=36.4795918367347, Blast_Score=233, Evalue=1e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006076 [H]
Pfam domain/function: PF01266 DAO [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 46848; Mature: 46848
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNYYEATVTRTPYPALAERIDTDVCIVGGGLAGLSTALGLVERGVRDIALLDAQTVGFG CCCCEEEEEECCCCHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCHHHHHHCCCHHCCCC ASGRNGGFVFGGYSLDNADLLRTLGPESARALYRLTIDAVELIRARAARYGIDCELVDGG CCCCCCCEEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC VILANWFDDPARLCAPRKLMKEAFGVDWEPLDERALRTRLKTDRYRGGLFERNAFHFHPL EEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECHH KYVLGVAAAAAQGGARIHEHSAARAIRRDGAGFVVATDGGAVRARRVVFAGGGYARGVYP HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEEECCCCCCCCCH RIERAVLPIATYVIATEPLGARLADAIACEAAVYDTRFAFDYYRPLADTRILWGGRISVL HHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEHHH ERGPEAIARLLRRDLLRVYPQLRDVAVQFAWGGLMSYARHKMPQIGRDAHGVWHAVGFGG HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEECCCC HGMAPTTVAGEVLAAALAGERPVPDGFARFGLARTFGLAGLAAAQLTYSAYEARDALAAR CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RCARAGQPFRQRL HHHHCCCHHHHCC >Mature Secondary Structure MQNYYEATVTRTPYPALAERIDTDVCIVGGGLAGLSTALGLVERGVRDIALLDAQTVGFG CCCCEEEEEECCCCHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCHHHHHHCCCHHCCCC ASGRNGGFVFGGYSLDNADLLRTLGPESARALYRLTIDAVELIRARAARYGIDCELVDGG CCCCCCCEEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC VILANWFDDPARLCAPRKLMKEAFGVDWEPLDERALRTRLKTDRYRGGLFERNAFHFHPL EEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECHH KYVLGVAAAAAQGGARIHEHSAARAIRRDGAGFVVATDGGAVRARRVVFAGGGYARGVYP HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEEECCCCCCCCCH RIERAVLPIATYVIATEPLGARLADAIACEAAVYDTRFAFDYYRPLADTRILWGGRISVL HHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEHHH ERGPEAIARLLRRDLLRVYPQLRDVAVQFAWGGLMSYARHKMPQIGRDAHGVWHAVGFGG HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEECCCC HGMAPTTVAGEVLAAALAGERPVPDGFARFGLARTFGLAGLAAAQLTYSAYEARDALAAR CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RCARAGQPFRQRL HHHHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503; 1840553; 7984428 [H]