| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is 76819494
Identifier: 76819494
GI number: 76819494
Start: 1735295
End: 1737004
Strand: Direct
Name: 76819494
Synonym: BURPS1710b_A1424
Alternate gene names: NA
Gene position: 1735295-1737004 (Clockwise)
Preceding gene: 76818060
Following gene: 76818228
Centisome position: 54.54
GC content: 74.91
Gene sequence:
>1710_bases ATGCGCCGTTCGCGCCCGCCGAAGCCCGCGAAGCCCGCCGCCGTCCGGCGCCGCCCGCACGGCGCGGCGCGCGCGCACGC CATTCGCGGCAACGGTCCGCAGCGGCGCGCCGTGCGCGAACGCGCGGCCCGCCGCCTGTCGCGCGACATCGACGCGGCGC TGCGCCGCGCGTCGACCTACCCGCATCCGGCCGGCCCTATCGTGCGCATCGAAACGCACCTCTCCGTCGTTTATCTCGTC GGGCGCTTCGCGTACAAGCGCCTGAAGCCGTTCGATTTCGGCTTCGCGAATTTCAGCGAACTCGCCGCGCGCCGCCGCGC GTGCGAAGCGGAGCTCGCGCTGAACCGCCCGCTCGCCGCGCCGATCTATCTCGCCGCCGGCCCGCTCGTGCGCCGCGCGC GCGGCTTGCGCCTGTTCGGCGCGGGCGCGGCCGTCGACCACGTCGTCCGGATGCGCCGCTTCGACGAGCGGATGCTGTTC TCCCGGCTGCTCGCGCGCGGCGCGCTCGACGCGGCGGACATCGATGCCGCCGCGACGCGCCTCGCCGCCTACCATCTGCA CGCGCCGCGCGACATCCCGCGGCGCGCGTACGGCAGCGCGCGCGAGCTGCGCCGGCAGCTCGACGACATGCTCGCGCCGC TCGCGCGCGCGCTCGGCGCGGCGCTGCCGGCGTCGCTGCGCGCGTGGTGCGTGCGGCGCTGCGACGAGCTCGCCGCGCAC CTGGACGCCCGGCGAGCCGACGGCTACGTCCGCGCATGCCACGGCGATCTGCACCTGAACAACGTCGTGAAGCGCGGCCG CGACGCGCTGATGTTCGACTGCATCGATTTCGACGACGCGCTGCGCTGGATCGACGTGATCAACGATCTGTCGTTTCTGT TGATGGATCTGCACGCGCACGATCGCGCCGCCCTCGCGCACCGCCTGCTGAACCGTTGGCTCGACGAAACGGGCGATTTC GCCGGCCTCGCCGCGCTGCCGCTGTATGTCGCGTATCGCGCGCTCGTGCGGGCGCTCGTCGCGACGATGCGCGCGGGCGG CGACGCCGCGGCGCGCGCCGCGCGCATCGAGCGCGCGCGCCGGTACGTCGACGTCGCCGCGCACGCGGCCCGCGCGCGCC GCCCATGCCTGCTGCTGTGCCACGGCTATTCGGGCTCGGGCAAATCGGTTGCGAGCCGCGCGCTCGCCGACGTGTCCGGT GCGATCCGGCTGTCGAGCGACAGCGAGCGCAAGCGCGCCCGACCGTTCGCGGCGGTCGACGCGCGGCCGCTTCCCGCGAG CGCGTACACGCCGCAGCAGATCGACGCGCAATACGAGCGCCTGCGCGCGCTCGCGCGCGACGTGCTGCGCGCCGGCTACA CGGCGCTCGTCGACGCGACGTTTCTCTCGCATGCGCGCCGCGCACGCTTCTTCGCGCTCGCGCGCGAGCTGGGCGTGCCC GTGTACGTGCTCGATTTCCATGCGAGCCGCGCATGCCTCGAGCGGCGCGTCGATGCGCGCGCCGCCGCGCGCGACGATCA TTCGGACGCGGGCGCGGCCGTGCTCGCGACGCAACGCGCGAGCGCCGATCCGCTCGATGCCGACGAGCGCGCGCGCACGA TCGGCTTCGATACCGACGTGCCGCTCGCGACGCTCCGGTCGGCCGGCTATTGGCGGCCGGTGCTCGACGCGCTCGACGCC GCGCGGGTGGACGCGCAAGCGACGCGTTGA
Upstream 100 bases:
>100_bases GACGACGGGCGCCGTCGCGGCGCGGCGGCTTCCTCGCCGCGGCACGGCGCGCGGCCGGCGCGCCCCGTCGCGCGCGTTCA CGATCCACGGAGGTGACGAG
Downstream 100 bases:
>100_bases AGCGGCGGGCCGCGCCGTGCGCAACCGTTGCCGCGACACATCGCGGCAACGAGGCCCGCGCCGCCCGCGCCGCAGGCCGT TCGCGCGCGGACACCTCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 569; Mature: 569
Protein sequence:
>569_residues MRRSRPPKPAKPAAVRRRPHGAARAHAIRGNGPQRRAVRERAARRLSRDIDAALRRASTYPHPAGPIVRIETHLSVVYLV GRFAYKRLKPFDFGFANFSELAARRRACEAELALNRPLAAPIYLAAGPLVRRARGLRLFGAGAAVDHVVRMRRFDERMLF SRLLARGALDAADIDAAATRLAAYHLHAPRDIPRRAYGSARELRRQLDDMLAPLARALGAALPASLRAWCVRRCDELAAH LDARRADGYVRACHGDLHLNNVVKRGRDALMFDCIDFDDALRWIDVINDLSFLLMDLHAHDRAALAHRLLNRWLDETGDF AGLAALPLYVAYRALVRALVATMRAGGDAAARAARIERARRYVDVAAHAARARRPCLLLCHGYSGSGKSVASRALADVSG AIRLSSDSERKRARPFAAVDARPLPASAYTPQQIDAQYERLRALARDVLRAGYTALVDATFLSHARRARFFALARELGVP VYVLDFHASRACLERRVDARAAARDDHSDAGAAVLATQRASADPLDADERARTIGFDTDVPLATLRSAGYWRPVLDALDA ARVDAQATR
Sequences:
>Translated_569_residues MRRSRPPKPAKPAAVRRRPHGAARAHAIRGNGPQRRAVRERAARRLSRDIDAALRRASTYPHPAGPIVRIETHLSVVYLV GRFAYKRLKPFDFGFANFSELAARRRACEAELALNRPLAAPIYLAAGPLVRRARGLRLFGAGAAVDHVVRMRRFDERMLF SRLLARGALDAADIDAAATRLAAYHLHAPRDIPRRAYGSARELRRQLDDMLAPLARALGAALPASLRAWCVRRCDELAAH LDARRADGYVRACHGDLHLNNVVKRGRDALMFDCIDFDDALRWIDVINDLSFLLMDLHAHDRAALAHRLLNRWLDETGDF AGLAALPLYVAYRALVRALVATMRAGGDAAARAARIERARRYVDVAAHAARARRPCLLLCHGYSGSGKSVASRALADVSG AIRLSSDSERKRARPFAAVDARPLPASAYTPQQIDAQYERLRALARDVLRAGYTALVDATFLSHARRARFFALARELGVP VYVLDFHASRACLERRVDARAAARDDHSDAGAAVLATQRASADPLDADERARTIGFDTDVPLATLRSAGYWRPVLDALDA ARVDAQATR >Mature_569_residues MRRSRPPKPAKPAAVRRRPHGAARAHAIRGNGPQRRAVRERAARRLSRDIDAALRRASTYPHPAGPIVRIETHLSVVYLV GRFAYKRLKPFDFGFANFSELAARRRACEAELALNRPLAAPIYLAAGPLVRRARGLRLFGAGAAVDHVVRMRRFDERMLF SRLLARGALDAADIDAAATRLAAYHLHAPRDIPRRAYGSARELRRQLDDMLAPLARALGAALPASLRAWCVRRCDELAAH LDARRADGYVRACHGDLHLNNVVKRGRDALMFDCIDFDDALRWIDVINDLSFLLMDLHAHDRAALAHRLLNRWLDETGDF AGLAALPLYVAYRALVRALVATMRAGGDAAARAARIERARRYVDVAAHAARARRPCLLLCHGYSGSGKSVASRALADVSG AIRLSSDSERKRARPFAAVDARPLPASAYTPQQIDAQYERLRALARDVLRAGYTALVDATFLSHARRARFFALARELGVP VYVLDFHASRACLERRVDARAAARDDHSDAGAAVLATQRASADPLDADERARTIGFDTDVPLATLRSAGYWRPVLDALDA ARVDAQATR
Specific function: Some isolated peptides of this protein are able to bind to human U937 monocytoblastic and A549 epithelial cell lines [H]
COG id: COG2187
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Secreted, cell wall [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011009 - InterPro: IPR010488 [H]
Pfam domain/function: PF06414 Zeta_toxin [H]
EC number: NA
Molecular weight: Translated: 62764; Mature: 62764
Theoretical pI: Translated: 11.37; Mature: 11.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRSRPPKPAKPAAVRRRPHGAARAHAIRGNGPQRRAVRERAARRLSRDIDAALRRASTY CCCCCCCCCCCCHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC PHPAGPIVRIETHLSVVYLVGRFAYKRLKPFDFGFANFSELAARRRACEAELALNRPLAA CCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC PIYLAAGPLVRRARGLRLFGAGAAVDHVVRMRRFDERMLFSRLLARGALDAADIDAAATR CHHHHCCHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LAAYHLHAPRDIPRRAYGSARELRRQLDDMLAPLARALGAALPASLRAWCVRRCDELAAH HHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH LDARRADGYVRACHGDLHLNNVVKRGRDALMFDCIDFDDALRWIDVINDLSFLLMDLHAH HHHHHCCCEEEEECCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCC DRAALAHRLLNRWLDETGDFAGLAALPLYVAYRALVRALVATMRAGGDAAARAARIERAR HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH RYVDVAAHAARARRPCLLLCHGYSGSGKSVASRALADVSGAIRLSSDSERKRARPFAAVD HHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEECCCCHHHHCCCCCCCC ARPLPASAYTPQQIDAQYERLRALARDVLRAGYTALVDATFLSHARRARFFALARELGVP CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC VYVLDFHASRACLERRVDARAAARDDHSDAGAAVLATQRASADPLDADERARTIGFDTDV EEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCC PLATLRSAGYWRPVLDALDAARVDAQATR CHHHHHCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRRSRPPKPAKPAAVRRRPHGAARAHAIRGNGPQRRAVRERAARRLSRDIDAALRRASTY CCCCCCCCCCCCHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC PHPAGPIVRIETHLSVVYLVGRFAYKRLKPFDFGFANFSELAARRRACEAELALNRPLAA CCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC PIYLAAGPLVRRARGLRLFGAGAAVDHVVRMRRFDERMLFSRLLARGALDAADIDAAATR CHHHHCCHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LAAYHLHAPRDIPRRAYGSARELRRQLDDMLAPLARALGAALPASLRAWCVRRCDELAAH HHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH LDARRADGYVRACHGDLHLNNVVKRGRDALMFDCIDFDDALRWIDVINDLSFLLMDLHAH HHHHHCCCEEEEECCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCC DRAALAHRLLNRWLDETGDFAGLAALPLYVAYRALVRALVATMRAGGDAAARAARIERAR HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH RYVDVAAHAARARRPCLLLCHGYSGSGKSVASRALADVSGAIRLSSDSERKRARPFAAVD HHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEEECCCCHHHHCCCCCCCC ARPLPASAYTPQQIDAQYERLRALARDVLRAGYTALVDATFLSHARRARFFALARELGVP CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC VYVLDFHASRACLERRVDARAAARDDHSDAGAAVLATQRASADPLDADERARTIGFDTDV EEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCC PLATLRSAGYWRPVLDALDAARVDAQATR CHHHHHCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]