| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is 76819434
Identifier: 76819434
GI number: 76819434
Start: 1365589
End: 1368495
Strand: Direct
Name: 76819434
Synonym: BURPS1710b_A1092
Alternate gene names: NA
Gene position: 1365589-1368495 (Clockwise)
Preceding gene: 76818008
Following gene: 76818622
Centisome position: 42.92
GC content: 67.42
Gene sequence:
>2907_bases ATGAATGCGCATCTGCCCGCCGGCGCGCTCGTGCCGCTCGTCACGCGCCATACCGACATTGCGATCGCCGCGCCGCTGCG CGGCACGACGACGCTGCCGCCCGTCGCATGGGAGCGGATCGGCCAGCACGCGCCCGTGCGCATCGCACCCGGCGCGCGCG CGCCCGACGATCCGCTGCCGCGCGCCGACATCGTCGTGATCACCTGGACGAGCGCCGAATGGTTCGCGCTCGATCACGTG TTCGTCGACAGCGCCCACACCGGCGACTACAACGATTACGCATGGAAGCAGGCATGGCTGCCGTACACGCGCGGCGCGTC GCCGTATGCGGCGGACGCGAAATCGGGTGCGCTCTGGGGGCTCTTTCAGATGGTGCGCATCGTCGACCGTTCGGGGCGCC CGTGGAATGTCCTGCTGTTCAAGTCGAACGCACACCTCGCGCATTCGCCGTGGCTCGACGGCTTGTCCGCGATGCTCCGC TGCATCGTCGAGGACGCACGGCCCGACCGCATCTACACGATCGGTACCGCGGGCGGCGCGCGCCACGATCAGCGCCTCGG CGACACGGTGCTCGCGAACGCGGCGTTGCTCGAGTTGCAACGCCCGCAGAACGCGACGAGCCCCGAGGGCGGCAACATGT ATCGCTGCCCGACGTGGTATCCGTCGACCGCGCTCGTCGGCGAAGTCGAAAGCCAGCTGCTGTTCAGGATGAGCGAGATC GTCACGCCGCAATCGCTCGCCGCGCTCTTCGACGAATTGAAAGCGCGCCATCCCGACGACCCGGGCCTGGGCGAGCTGAC GCTGGCGGATCTGCTCAACGACGCGATTCGGCCCGAATGCCTGCGCACGCCGGCGATCCGCCCGCTGAAGGACGCACCGC TTCTGACGACGGATTTCTATTACATCGCGGAGGGCAACGATGCGCACGCGTACTCGTGCCTCGAAATGGACGATGCGATC ATCGCCCAGCAGGCGAACCGGCTCGGCGTGCGCTTCGCCTGCGTGCGCAACATTTCCGATCCGATCGTCAGACGACGCAC CGACCGAGGCACGCCGATCTCGGAGGCCGTGCGCGCGGACTGGTCCGGCCTCATCTATTCGACGTTCGGACTGCAGACGA GCTACAACGGCGCGCTCGCGACGTGGGCGACGATAGCGGGCGAGGGCTCGGCGGCCTACAATCCGAGCCGCGAGCACCCG CCCGCCGACGAAGCCGATCCGCTCGAAGTGCAGCTCGCGTTCCAGGTACGCTCGTGCGGCACGTGCTCGTTCTTCTGGCC CGCCGATCCGAAAAAGCGCACATATGGCCCGTATACGGCGTTCGACTTCGACACCACCGTGCCCTACCCGGCAAGCGCGA ACGGCAGGAGCGGCGCGGTGCGCTGGCTCAGCGGTCGCACCCGGCCGCCGGCGTTTCCGAATGGCGAAGTGATCGACGGC TGCCGCAAGGCGCCCATCATGACGATCGGCATCAATCCGAATCTGACTGCGTTCCTGCCGGGCCAGACCGGCGCGGCGTG GTGCTATCCGGATTTCTCGTCCGACGGCGACACCGACGCATGGGCGAAATACGCGTGGTACTACCGCTATCGAACCGTCT ATCAGGAGAAGCTCGATCTCGATTTCGTACGCCGTTTCATGTTGCCGGAACGCCGCGTGATCGCGGCGCGCGGCGGCGAG GTGACGGGCGCCGCGCGCATCGACGACAATCCCGCGTGGTCGATCACGGTGCGCTACGACGGCGACGCCGCCGATACGAC GATCCCGATCCCCGGCGAGCCCGGCGATTTTCCGTACGTGCTGCTTTTCGACACCTACCGGCCGCACAACCGCTTCGCCG CGGGCGACGTACTCGCCGCGCGCGTGTCGGTGCCGGAGGGCATCCAGGTCGAAGTGCTTCAACAGCCGCAAAGCTATTAC CTGCAGATGGTGCCCGTGCTCGAGCGCTTCGAGCGCACGCTGCGCGACGGCGGCCACCCGGGCGCATCGCTGCACGTCGG CGAAGACGTCTGCCAGCTCGATATGGTCGCGTGCGCGTCGCCGCACTGGAAGCCGGGCTTCCTCGGCGGCAGCGACGCGA GCGTCACGGCGATCGTCGACAACTGCGTGAGCCGCAACGCATGGGCGATCAAGCAGATGGTGCAGACGCGTCCCGCCCTC CTCTATATCGTCAGCGAATCGAGCTGGAACATGTTCCATGCGGCGCTCGGCGCGCATGTGCGCCGCGACCCGCCGCTTTC TTCTCACCCCGCCGACAAGGACTACACGCTGCTGAAGGAGACGACCGATCCGGAGCATCCGGCCTACGTCGAGTTCGACG TGACGATCGACGGCATGCGCTACGCCCATCGCACGCGCCTCGTCATCACGCCGCACTTCTCGTACAACAGCTTCTTCCTG CAGCAATACCGGATGAGCACGCAAGACTGGCACGCGTTCGGCGCGGCGCAGCCCGGATGCGTCGCGGCGCTCACGCCGCA GAACGGCTTCACGCTCGTGCTGCCGACGCAGGCGTACCCGGACGATTACGTCGCGATCCAGTTGCCCGCCGACGCGAGCG CGGCGAATGCGGCGCGCGCGTGGCTCGCGAACCAGTTCCCGGACGCGGCACGCACGCTCGGCACGTACTTCGTCGACGCG CATGCGTCGATGGCTTCGGTGCTCGACGAGCTCTACGCGAACCATACCCTCACGTGGCACGACACCGACAGCGGCGGCTA TCTGTCGCGCAACGAAGGCTCGTGCCGGTTCTGCGTGAACCGGCACTGGCAATTCCCGAACGAATGCCGCTACGACAAGA CGCACGAGCCGCCGCCGCCCGCCGGTTTTCTCGCGAAGGTCGCACGGCATCTCGTCGCCACCGGCAAGCCCGCCGCTGAG AACGCCACGACAGGAGCACCGCTATGA
Upstream 100 bases:
>100_bases TCCATAGAACGCACCAGCCGGCCGACTAGCGCGGCATCCGCCCGACGACACGACAAAACATCGACGCACGCGCGTCCCCA CACCGCCCAGGAGTCTTGCC
Downstream 100 bases:
>100_bases GCACGACCGATGTGTCGCAGGACATGCGCGTCGCACCGGATTCGGTGCGGGTATGGCGGGGCTTCCGGCTGCCGTCGCTC GGCCTCGATCAATTCCTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 968; Mature: 968
Protein sequence:
>968_residues MNAHLPAGALVPLVTRHTDIAIAAPLRGTTTLPPVAWERIGQHAPVRIAPGARAPDDPLPRADIVVITWTSAEWFALDHV FVDSAHTGDYNDYAWKQAWLPYTRGASPYAADAKSGALWGLFQMVRIVDRSGRPWNVLLFKSNAHLAHSPWLDGLSAMLR CIVEDARPDRIYTIGTAGGARHDQRLGDTVLANAALLELQRPQNATSPEGGNMYRCPTWYPSTALVGEVESQLLFRMSEI VTPQSLAALFDELKARHPDDPGLGELTLADLLNDAIRPECLRTPAIRPLKDAPLLTTDFYYIAEGNDAHAYSCLEMDDAI IAQQANRLGVRFACVRNISDPIVRRRTDRGTPISEAVRADWSGLIYSTFGLQTSYNGALATWATIAGEGSAAYNPSREHP PADEADPLEVQLAFQVRSCGTCSFFWPADPKKRTYGPYTAFDFDTTVPYPASANGRSGAVRWLSGRTRPPAFPNGEVIDG CRKAPIMTIGINPNLTAFLPGQTGAAWCYPDFSSDGDTDAWAKYAWYYRYRTVYQEKLDLDFVRRFMLPERRVIAARGGE VTGAARIDDNPAWSITVRYDGDAADTTIPIPGEPGDFPYVLLFDTYRPHNRFAAGDVLAARVSVPEGIQVEVLQQPQSYY LQMVPVLERFERTLRDGGHPGASLHVGEDVCQLDMVACASPHWKPGFLGGSDASVTAIVDNCVSRNAWAIKQMVQTRPAL LYIVSESSWNMFHAALGAHVRRDPPLSSHPADKDYTLLKETTDPEHPAYVEFDVTIDGMRYAHRTRLVITPHFSYNSFFL QQYRMSTQDWHAFGAAQPGCVAALTPQNGFTLVLPTQAYPDDYVAIQLPADASAANAARAWLANQFPDAARTLGTYFVDA HASMASVLDELYANHTLTWHDTDSGGYLSRNEGSCRFCVNRHWQFPNECRYDKTHEPPPPAGFLAKVARHLVATGKPAAE NATTGAPL
Sequences:
>Translated_968_residues MNAHLPAGALVPLVTRHTDIAIAAPLRGTTTLPPVAWERIGQHAPVRIAPGARAPDDPLPRADIVVITWTSAEWFALDHV FVDSAHTGDYNDYAWKQAWLPYTRGASPYAADAKSGALWGLFQMVRIVDRSGRPWNVLLFKSNAHLAHSPWLDGLSAMLR CIVEDARPDRIYTIGTAGGARHDQRLGDTVLANAALLELQRPQNATSPEGGNMYRCPTWYPSTALVGEVESQLLFRMSEI VTPQSLAALFDELKARHPDDPGLGELTLADLLNDAIRPECLRTPAIRPLKDAPLLTTDFYYIAEGNDAHAYSCLEMDDAI IAQQANRLGVRFACVRNISDPIVRRRTDRGTPISEAVRADWSGLIYSTFGLQTSYNGALATWATIAGEGSAAYNPSREHP PADEADPLEVQLAFQVRSCGTCSFFWPADPKKRTYGPYTAFDFDTTVPYPASANGRSGAVRWLSGRTRPPAFPNGEVIDG CRKAPIMTIGINPNLTAFLPGQTGAAWCYPDFSSDGDTDAWAKYAWYYRYRTVYQEKLDLDFVRRFMLPERRVIAARGGE VTGAARIDDNPAWSITVRYDGDAADTTIPIPGEPGDFPYVLLFDTYRPHNRFAAGDVLAARVSVPEGIQVEVLQQPQSYY LQMVPVLERFERTLRDGGHPGASLHVGEDVCQLDMVACASPHWKPGFLGGSDASVTAIVDNCVSRNAWAIKQMVQTRPAL LYIVSESSWNMFHAALGAHVRRDPPLSSHPADKDYTLLKETTDPEHPAYVEFDVTIDGMRYAHRTRLVITPHFSYNSFFL QQYRMSTQDWHAFGAAQPGCVAALTPQNGFTLVLPTQAYPDDYVAIQLPADASAANAARAWLANQFPDAARTLGTYFVDA HASMASVLDELYANHTLTWHDTDSGGYLSRNEGSCRFCVNRHWQFPNECRYDKTHEPPPPAGFLAKVARHLVATGKPAAE NATTGAPL >Mature_968_residues MNAHLPAGALVPLVTRHTDIAIAAPLRGTTTLPPVAWERIGQHAPVRIAPGARAPDDPLPRADIVVITWTSAEWFALDHV FVDSAHTGDYNDYAWKQAWLPYTRGASPYAADAKSGALWGLFQMVRIVDRSGRPWNVLLFKSNAHLAHSPWLDGLSAMLR CIVEDARPDRIYTIGTAGGARHDQRLGDTVLANAALLELQRPQNATSPEGGNMYRCPTWYPSTALVGEVESQLLFRMSEI VTPQSLAALFDELKARHPDDPGLGELTLADLLNDAIRPECLRTPAIRPLKDAPLLTTDFYYIAEGNDAHAYSCLEMDDAI IAQQANRLGVRFACVRNISDPIVRRRTDRGTPISEAVRADWSGLIYSTFGLQTSYNGALATWATIAGEGSAAYNPSREHP PADEADPLEVQLAFQVRSCGTCSFFWPADPKKRTYGPYTAFDFDTTVPYPASANGRSGAVRWLSGRTRPPAFPNGEVIDG CRKAPIMTIGINPNLTAFLPGQTGAAWCYPDFSSDGDTDAWAKYAWYYRYRTVYQEKLDLDFVRRFMLPERRVIAARGGE VTGAARIDDNPAWSITVRYDGDAADTTIPIPGEPGDFPYVLLFDTYRPHNRFAAGDVLAARVSVPEGIQVEVLQQPQSYY LQMVPVLERFERTLRDGGHPGASLHVGEDVCQLDMVACASPHWKPGFLGGSDASVTAIVDNCVSRNAWAIKQMVQTRPAL LYIVSESSWNMFHAALGAHVRRDPPLSSHPADKDYTLLKETTDPEHPAYVEFDVTIDGMRYAHRTRLVITPHFSYNSFFL QQYRMSTQDWHAFGAAQPGCVAALTPQNGFTLVLPTQAYPDDYVAIQLPADASAANAARAWLANQFPDAARTLGTYFVDA HASMASVLDELYANHTLTWHDTDSGGYLSRNEGSCRFCVNRHWQFPNECRYDKTHEPPPPAGFLAKVARHLVATGKPAAE NATTGAPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 106649; Mature: 106649
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAHLPAGALVPLVTRHTDIAIAAPLRGTTTLPPVAWERIGQHAPVRIAPGARAPDDPLP CCCCCCCCCHHHHEECCCCEEEEECCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCC RADIVVITWTSAEWFALDHVFVDSAHTGDYNDYAWKQAWLPYTRGASPYAADAKSGALWG CCCEEEEEECCCCEEEEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHH LFQMVRIVDRSGRPWNVLLFKSNAHLAHSPWLDGLSAMLRCIVEDARPDRIYTIGTAGGA HHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCC RHDQRLGDTVLANAALLELQRPQNATSPEGGNMYRCPTWYPSTALVGEVESQLLFRMSEI CCHHHHCHHHHHHHHHEEEECCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHH VTPQSLAALFDELKARHPDDPGLGELTLADLLNDAIRPECLRTPAIRPLKDAPLLTTDFY CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHCCCCCCCCCCCCEEEEEEE YIAEGNDAHAYSCLEMDDAIIAQQANRLGVRFACVRNISDPIVRRRTDRGTPISEAVRAD EEEECCCCCEEEEECHHHHHHHHHHHHCCEEEEEHHCCCHHHHHHCCCCCCCHHHHHHCC WSGLIYSTFGLQTSYNGALATWATIAGEGSAAYNPSREHPPADEADPLEVQLAFQVRSCG CCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCC TCSFFWPADPKKRTYGPYTAFDFDTTVPYPASANGRSGAVRWLSGRTRPPAFPNGEVIDG CEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHH CRKAPIMTIGINPNLTAFLPGQTGAAWCYPDFSSDGDTDAWAKYAWYYRYRTVYQEKLDL CCCCCEEEEECCCCEEEEECCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCH DFVRRFMLPERRVIAARGGEVTGAARIDDNPAWSITVRYDGDAADTTIPIPGEPGDFPYV HHHHHHHCCCCEEEEECCCCEEEEEEECCCCCEEEEEEECCCCCCCEEECCCCCCCCCEE LLFDTYRPHNRFAAGDVLAARVSVPEGIQVEVLQQPQSYYLQMVPVLERFERTLRDGGHP EEEECCCCCCCCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCC GASLHVGEDVCQLDMVACASPHWKPGFLGGSDASVTAIVDNCVSRNAWAIKQMVQTRPAL CCEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCEE LYIVSESSWNMFHAALGAHVRRDPPLSSHPADKDYTLLKETTDPEHPAYVEFDVTIDGMR EEEEECCCCCHHHHHHHCHHCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEECCEE YAHRTRLVITPHFSYNSFFLQQYRMSTQDWHAFGAAQPGCVAALTPQNGFTLVLPTQAYP EECEEEEEEEECCCCCHHHHHHHHCCCCHHHHCCCCCCCEEEEECCCCCEEEEECCCCCC DDYVAIQLPADASAANAARAWLANQFPDAARTLGTYFVDAHASMASVLDELYANHTLTWH CCEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHEEEHHHHHHHHHHHHHHCCEEEEE DTDSGGYLSRNEGSCRFCVNRHWQFPNECRYDKTHEPPPPAGFLAKVARHLVATGKPAAE ECCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC NATTGAPL CCCCCCCC >Mature Secondary Structure MNAHLPAGALVPLVTRHTDIAIAAPLRGTTTLPPVAWERIGQHAPVRIAPGARAPDDPLP CCCCCCCCCHHHHEECCCCEEEEECCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCC RADIVVITWTSAEWFALDHVFVDSAHTGDYNDYAWKQAWLPYTRGASPYAADAKSGALWG CCCEEEEEECCCCEEEEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHH LFQMVRIVDRSGRPWNVLLFKSNAHLAHSPWLDGLSAMLRCIVEDARPDRIYTIGTAGGA HHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCC RHDQRLGDTVLANAALLELQRPQNATSPEGGNMYRCPTWYPSTALVGEVESQLLFRMSEI CCHHHHCHHHHHHHHHEEEECCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHH VTPQSLAALFDELKARHPDDPGLGELTLADLLNDAIRPECLRTPAIRPLKDAPLLTTDFY CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHCCCCCCCCCCCCEEEEEEE YIAEGNDAHAYSCLEMDDAIIAQQANRLGVRFACVRNISDPIVRRRTDRGTPISEAVRAD EEEECCCCCEEEEECHHHHHHHHHHHHCCEEEEEHHCCCHHHHHHCCCCCCCHHHHHHCC WSGLIYSTFGLQTSYNGALATWATIAGEGSAAYNPSREHPPADEADPLEVQLAFQVRSCG CCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCC TCSFFWPADPKKRTYGPYTAFDFDTTVPYPASANGRSGAVRWLSGRTRPPAFPNGEVIDG CEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHH CRKAPIMTIGINPNLTAFLPGQTGAAWCYPDFSSDGDTDAWAKYAWYYRYRTVYQEKLDL CCCCCEEEEECCCCEEEEECCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCH DFVRRFMLPERRVIAARGGEVTGAARIDDNPAWSITVRYDGDAADTTIPIPGEPGDFPYV HHHHHHHCCCCEEEEECCCCEEEEEEECCCCCEEEEEEECCCCCCCEEECCCCCCCCCEE LLFDTYRPHNRFAAGDVLAARVSVPEGIQVEVLQQPQSYYLQMVPVLERFERTLRDGGHP EEEECCCCCCCCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCC GASLHVGEDVCQLDMVACASPHWKPGFLGGSDASVTAIVDNCVSRNAWAIKQMVQTRPAL CCEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCEE LYIVSESSWNMFHAALGAHVRRDPPLSSHPADKDYTLLKETTDPEHPAYVEFDVTIDGMR EEEEECCCCCHHHHHHHCHHCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEECCEE YAHRTRLVITPHFSYNSFFLQQYRMSTQDWHAFGAAQPGCVAALTPQNGFTLVLPTQAYP EECEEEEEEEECCCCCHHHHHHHHCCCCHHHHCCCCCCCEEEEECCCCCEEEEECCCCCC DDYVAIQLPADASAANAARAWLANQFPDAARTLGTYFVDAHASMASVLDELYANHTLTWH CCEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHEEEHHHHHHHHHHHHHHCCEEEEE DTDSGGYLSRNEGSCRFCVNRHWQFPNECRYDKTHEPPPPAGFLAKVARHLVATGKPAAE ECCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC NATTGAPL CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA