| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
Click here to switch to the map view.
The map label for this gene is 76819299
Identifier: 76819299
GI number: 76819299
Start: 487387
End: 489393
Strand: Direct
Name: 76819299
Synonym: BURPS1710b_A0339
Alternate gene names: NA
Gene position: 487387-489393 (Clockwise)
Preceding gene: 76819152
Following gene: 76817421
Centisome position: 15.32
GC content: 68.56
Gene sequence:
>2007_bases ATGCCGCCGATCGACGCGTCCGCGCCCGGGTCGATCGGAAAGAAGAGCCCCGTGTCGCGCAGGTGCGCATTGAGCTGCTT GCGCGTCACCCCCGCCTCGACCGTGCAGTCGAGATCCTCGGCGCTCACGCGCAGAATCCGGTTCATGCCGGACAGATCGA TGCATACGCCGCCGCGCAGCGCGGCGATGTGCCCCTCGCACGACGTGCCGGTGCCGAACGGAATCAGCGGCACGCGCAGC CGATGGCATGCGCGTGTGATCTCGGCGACCTCGGCCGTCGTCCGCACGAACGCGACGGCGTCGGGCGGCGCGCCCGGATG GAACGAGATGTCCTTGCCGTGCTGCTCGCGCACCGCGCGCCCGACTGCGAGGCGCTCGCCGACGATCGCGCGCAACGCCT CGACGCAGCGCCCGATCGTCTGCGGCGTGGCGAATGCGGCAGGCGCGCCGCCGCCGGGCGGCACGCCCGCGAAAGCCGCC GCCCGCCCGTCCCACTGCTGTCCGTCGTCGGTCACTTCGCGCATGCGTCGCCTCCGTTCGTCGATCGCGCCCGCTCGCCG CGGCGCGCAGCCCGCGCACACGCGGGGCCGCCCCCATCCCCGCGCCGCCGCGCGCGCCCCGCGCGCGTGTCGCCCGCCGT CCGGGCCGCGTTCGCGCCGGCCGTCATTTCCGCTCGAAGCCGCCGACGATCATCAGTTGCATGTCGGCCGCGCCTTCGCG CAGCGACTTCGCGTGCTGATAATCGGCCGAATGATAGAAGCGCGCCGCCGCGTCCGCGTCCGCGAACTCGACGAGCACGA TCCGCCGCTCGTCGGCGGGCCCCTCGAGCGTCAGCTTCTCGCCGCCGCGTGTGAGGAAGCGGCCGCCGTAGCGCGCGATG ATGTCGGGCGTCAGCGCCTTGTAACGCGCGTATTTCGACGGATCGCTGATCGCCATCCTGCCCAGCAAATATGCCGCCAT GGTTCCCTCGCACCGCAAGCATCGGAAAAACGGCGCCGCGCGGCGCCGTGCCCGGCATCGTCACGCCGCCTTCTTCACGT AGCCCGATTCCAGCAGCGACGCATCGAGCAGATCCCACACGCTCGCGAGCGCATCGAGAAACTCCTGCGCGCCTTCGATC ACGAGCGCCGCATGCTCGGATTCCAGCGCGGGCTTCACCGCGGCGCGCGCGTTCTCCTCATGCTGCTGCTCGGCGCCGAC CTCGCCCCAATGCTCGAGCAGGTAGTGCATCTCGGGCACCTCGAGCGACGCGCCGTACAGCCCGCTGTCGACGAGACAGT GCTTCTCGCCCGGGATCAACTGGCGATTCGAGATCATCTCGAGCGCGAGCGCGGTGCCGAGATTGCGATACGTCGATTCG ACGTCGACAAGCTTGCGGCGCTCGAACACGTTGATCGCACGGCGCACCTGCGTCGTGAGGCCGGTCTCGTCGTCGTAGCC GGGCAGCGAGCCGAGCAGTTCGTCCGAATAGCGCTTGAGCGCGCCCTCGACGGCCGCCTGATCGTACAGATCGGGAATCA CCGCGCCGCCCGCCGCGCGATTGACGATGTAGCCCGCCATCGTCGCGAGCTCGGGACCGTGCCCCGATTCGCTGTCGACG ATCTCGGTCATCAGCTCGCTTTGCTTCTGCAGCCCGTGCTCGGCGAGCGCGCGCGGAAAATTCCAGCCCGGGCGCGTCGA CGCGCAGAAATGCTGGATCTGATGGAACAACGCCCCGACGACCTTCGGTTCGGGATCGACCTTCGCCCAGTTCAGGAACA CCGGGTGGCTATAGCAGCGATGGCTTTTGACTTTCTGAACCAGTTCATCGACAGTGATCGGCATGACACACTCCTCGGAA GTGACTACATCACATCGGCCCAAGACAACGAAGAACATCTCCTCAAGCGCTCCCCAGAATCATCCGGCCACCGGGGTGGC CGAGCGTTTCGACGGCGACGTTTCCGAACCCCGCCTGCTCGAATTTCTCCCGCCACGCGTCCTCGCTCAGCAGCCGGCGC GACATGA
Upstream 100 bases:
>100_bases GACGACGTCGCCGTTCGGCAGCACGACTTCGAGCGCGAGCACGCTCTCGCGCATCGTCCCGTAGCGCACCGCGTTCGTGC CGGACGCGCGCGTCGAGCAC
Downstream 100 bases:
>100_bases AGTTGCGGTGCAGGTGATTGAAGGCCGCGGCGAACGAACGCTCCCACCGGTCGGGCGCGAGCGGCACCGCGTCGACGATC ACGACGGTGCCGCTCGACGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 668; Mature: 667
Protein sequence:
>668_residues MPPIDASAPGSIGKKSPVSRRCALSCLRVTPASTVQSRSSALTRRIRFMPDRSMHTPPRSAAMCPSHDVPVPNGISGTRS RWHARVISATSAVVRTNATASGGAPGWNEMSLPCCSRTARPTARRSPTIARNASTQRPIVCGVANAAGAPPPGGTPAKAA ARPSHCCPSSVTSRMRRLRSSIAPARRGAQPAHTRGRPHPRAAARAPRACRPPSGPRSRRPSFPLEAADDHQLHVGRAFA QRLRVLIIGRMIEARRRVRVRELDEHDPPLVGGPLERQLLAAACEEAAAVARDDVGRQRLVTRVFRRIADRHPAQQICRH GSLAPQASEKRRRAAPCPASSRRLLHVARFQQRRIEQIPHARERIEKLLRAFDHERRMLGFQRGLHRGARVLLMLLLGAD LAPMLEQVVHLGHLERRAVQPAVDETVLLARDQLAIRDHLERERGAEIAIRRFDVDKLAALEHVDRTAHLRREAGLVVVA GQRAEQFVRIALERALDGRLIVQIGNHRAARRAIDDVARHRRELGTVPRFAVDDLGHQLALLLQPVLGERARKIPARARR RAEMLDLMEQRPDDLRFGIDLRPVQEHRVAIAAMAFDFLNQFIDSDRHDTLLGSDYITSAQDNEEHLLKRSPESSGHRGG RAFRRRRFRTPPARISPATRPRSAAGAT
Sequences:
>Translated_668_residues MPPIDASAPGSIGKKSPVSRRCALSCLRVTPASTVQSRSSALTRRIRFMPDRSMHTPPRSAAMCPSHDVPVPNGISGTRS RWHARVISATSAVVRTNATASGGAPGWNEMSLPCCSRTARPTARRSPTIARNASTQRPIVCGVANAAGAPPPGGTPAKAA ARPSHCCPSSVTSRMRRLRSSIAPARRGAQPAHTRGRPHPRAAARAPRACRPPSGPRSRRPSFPLEAADDHQLHVGRAFA QRLRVLIIGRMIEARRRVRVRELDEHDPPLVGGPLERQLLAAACEEAAAVARDDVGRQRLVTRVFRRIADRHPAQQICRH GSLAPQASEKRRRAAPCPASSRRLLHVARFQQRRIEQIPHARERIEKLLRAFDHERRMLGFQRGLHRGARVLLMLLLGAD LAPMLEQVVHLGHLERRAVQPAVDETVLLARDQLAIRDHLERERGAEIAIRRFDVDKLAALEHVDRTAHLRREAGLVVVA GQRAEQFVRIALERALDGRLIVQIGNHRAARRAIDDVARHRRELGTVPRFAVDDLGHQLALLLQPVLGERARKIPARARR RAEMLDLMEQRPDDLRFGIDLRPVQEHRVAIAAMAFDFLNQFIDSDRHDTLLGSDYITSAQDNEEHLLKRSPESSGHRGG RAFRRRRFRTPPARISPATRPRSAAGAT >Mature_667_residues PPIDASAPGSIGKKSPVSRRCALSCLRVTPASTVQSRSSALTRRIRFMPDRSMHTPPRSAAMCPSHDVPVPNGISGTRSR WHARVISATSAVVRTNATASGGAPGWNEMSLPCCSRTARPTARRSPTIARNASTQRPIVCGVANAAGAPPPGGTPAKAAA RPSHCCPSSVTSRMRRLRSSIAPARRGAQPAHTRGRPHPRAAARAPRACRPPSGPRSRRPSFPLEAADDHQLHVGRAFAQ RLRVLIIGRMIEARRRVRVRELDEHDPPLVGGPLERQLLAAACEEAAAVARDDVGRQRLVTRVFRRIADRHPAQQICRHG SLAPQASEKRRRAAPCPASSRRLLHVARFQQRRIEQIPHARERIEKLLRAFDHERRMLGFQRGLHRGARVLLMLLLGADL APMLEQVVHLGHLERRAVQPAVDETVLLARDQLAIRDHLERERGAEIAIRRFDVDKLAALEHVDRTAHLRREAGLVVVAG QRAEQFVRIALERALDGRLIVQIGNHRAARRAIDDVARHRRELGTVPRFAVDDLGHQLALLLQPVLGERARKIPARARRR AEMLDLMEQRPDDLRFGIDLRPVQEHRVAIAAMAFDFLNQFIDSDRHDTLLGSDYITSAQDNEEHLLKRSPESSGHRGGR AFRRRRFRTPPARISPATRPRSAAGAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74125; Mature: 73994
Theoretical pI: Translated: 12.16; Mature: 12.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPIDASAPGSIGKKSPVSRRCALSCLRVTPASTVQSRSSALTRRIRFMPDRSMHTPPRS CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC AAMCPSHDVPVPNGISGTRSRWHARVISATSAVVRTNATASGGAPGWNEMSLPCCSRTAR CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCC PTARRSPTIARNASTQRPIVCGVANAAGAPPPGGTPAKAAARPSHCCPSSVTSRMRRLRS CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHH SIAPARRGAQPAHTRGRPHPRAAARAPRACRPPSGPRSRRPSFPLEAADDHQLHVGRAFA HHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH QRLRVLIIGRMIEARRRVRVRELDEHDPPLVGGPLERQLLAAACEEAAAVARDDVGRQRL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VTRVFRRIADRHPAQQICRHGSLAPQASEKRRRAAPCPASSRRLLHVARFQQRRIEQIPH HHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCH ARERIEKLLRAFDHERRMLGFQRGLHRGARVLLMLLLGADLAPMLEQVVHLGHLERRAVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC PAVDETVLLARDQLAIRDHLERERGAEIAIRRFDVDKLAALEHVDRTAHLRREAGLVVVA CHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCEEEEE GQRAEQFVRIALERALDGRLIVQIGNHRAARRAIDDVARHRRELGTVPRFAVDDLGHQLA CHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH LLLQPVLGERARKIPARARRRAEMLDLMEQRPDDLRFGIDLRPVQEHRVAIAAMAFDFLN HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHEECCCCCCHHHHHHHHHHHHHHHHH QFIDSDRHDTLLGSDYITSAQDNEEHLLKRSPESSGHRGGRAFRRRRFRTPPARISPATR HHHCCCCCCCCCCCHHHCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC PRSAAGAT CCCCCCCC >Mature Secondary Structure PPIDASAPGSIGKKSPVSRRCALSCLRVTPASTVQSRSSALTRRIRFMPDRSMHTPPRS CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC AAMCPSHDVPVPNGISGTRSRWHARVISATSAVVRTNATASGGAPGWNEMSLPCCSRTAR CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCC PTARRSPTIARNASTQRPIVCGVANAAGAPPPGGTPAKAAARPSHCCPSSVTSRMRRLRS CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHH SIAPARRGAQPAHTRGRPHPRAAARAPRACRPPSGPRSRRPSFPLEAADDHQLHVGRAFA HHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH QRLRVLIIGRMIEARRRVRVRELDEHDPPLVGGPLERQLLAAACEEAAAVARDDVGRQRL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VTRVFRRIADRHPAQQICRHGSLAPQASEKRRRAAPCPASSRRLLHVARFQQRRIEQIPH HHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCH ARERIEKLLRAFDHERRMLGFQRGLHRGARVLLMLLLGADLAPMLEQVVHLGHLERRAVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC PAVDETVLLARDQLAIRDHLERERGAEIAIRRFDVDKLAALEHVDRTAHLRREAGLVVVA CHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCEEEEE GQRAEQFVRIALERALDGRLIVQIGNHRAARRAIDDVARHRRELGTVPRFAVDDLGHQLA CHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH LLLQPVLGERARKIPARARRRAEMLDLMEQRPDDLRFGIDLRPVQEHRVAIAAMAFDFLN HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHEECCCCCCHHHHHHHHHHHHHHHHH QFIDSDRHDTLLGSDYITSAQDNEEHLLKRSPESSGHRGGRAFRRRRFRTPPARISPATR HHHCCCCCCCCCCCHHHCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC PRSAAGAT CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA