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The map label for this gene is yjcF [C]

Identifier: 76819210

GI number: 76819210

Start: 2082180

End: 2084768

Strand: Direct

Name: yjcF [C]

Synonym: BURPS1710b_A1704

Alternate gene names: 76819210

Gene position: 2082180-2084768 (Clockwise)

Preceding gene: 76818495

Following gene: 76818653

Centisome position: 65.44

GC content: 69.29

Gene sequence:

>2589_bases
GTGCGACCGAAACGCTCGTGCAGGTCGCCAAGAAGACGCAGGAATGCGAATTCATCAAGGGCATCAAGATCTCGATGTGA
ACGCACGCTCGCGCGAACGCCACTACACCCCATGAAAATCGTCAAACCGCTTGCCATCAGCCCGCTGACCCGCGTGTACC
GGATGCACGGCCGGGAGTATCTCGGCGTCGCCGCGCTGTTGATCGCGACGCTCGGCGACGAGCCGAAACTGCTGGCCGAA
TCGGCGCTCTGGCGTCTGGCCGGCGACGAACTGCGCGGCTATCCGCTCGACATGGCGCTGCCGAAGGCGTGTCCGGAATT
TCTCGTGTCCGGATACGCGTACGGAAAGTACGCGAGCGATCCGCACGCGTGCGCGTGCGAAGTGGGCGTGCGCATTGCCG
GCCTCGAGAAGCGGCTGCGCGTCTGCGGCGACCGGCAGTGGGCGGGCGCGCGCATCACCGCGCCGCGGCCGTTCGAGCGG
CTACCGATCGACTGGGATCTCGCTTACGGCGGCGCGGGTTGCGCGGACAATCCGCGAGGCCGCGGCGCGCACGCGCGGGA
GGGCGCGCCGCGCGATCTGCCGAATGTCGAATACGCGCACAGCCCGATGCGCTTTGCGCACGAGCAACCCGCGCCCGCCG
GCTTTTGCCCGGTCGACGCGGCATGGCCGGCGCGCGCCGGCCTGTACGGCGCGCTCGATCGGCAATGGCAGGAAGAGGAT
TGTCCGGGCTTTCCGCGCACGCTCGATCCGCGCTACTTCAACATCGCGCCGGCCGATCAGCAACTGCCCGAGCTGCGGGC
ATTCCCGGACGGCGCGCGCTACGAACTGACGCACATGCATCCGGACCACGCGACGCTCGCGGGAAACCTGCCCGCGCTGC
GCGCGAGATCGTTCGTGGTACGTCGGGGCAGCGATGCGCCCGAGGAAATGCCGATGCGCTTGACGACCGCGTGGTTCGTT
CCGCATCGCGAACGCGTGATCCTGATCTATCACGGCGTCACGCCCGTTCGCGCGTTCGACGCGAGCGACGTGCAGACGGT
GCTGTTCGGCGCGGAGGCGAGCGGGCACGCGAGGCCCGCCGACTGGTATCGGCAGGTGATCGAGTGGCGCACGCGGGACG
ACAGGGCGGCGCTGTACGCGCTGCGCGACCGGGATCTGCTGCCCGAGCATGCGCTTGCGCCCGAAGCGGCGGCGACGCCC
GAGCCGACGCAGCAGAGCGCGAAGCAGCGGCAGCTTCGCGAACGGTTGAGCGTCTTTCCGGATGCTCCGCGCGCACAGAC
GCCGGCGCCGGATCGGCTGGCCGAATTCGTCGAGCAGCAGCAAGCGCTCGCCGACGAAAAGCGCGCCGCGCTGGAAGCCA
TGCGGCGGGAACTGGCGACCAGCGAAGTATTTTCGGTCGGCCGTCGGCGCGGCCCGCCCGGCCGGATCGCGCCCGCGGAC
GAAGAGCCCGCGCGGCACGCGGGCGCGTTGGCCGAATCGCCGGACATCCGGGCGCTCGAACGCGACGCGGACGAGCGTCT
TCGCGGGCTGTACCAGCAGTGCGCGCAACATCAGGACGCGCCGGCCCGGCTGCACGGCGCGGCCGCGCGAGCGCGCCGCG
AGTGCGTCGCGTCGGCCGCCGCGGCCGGCCAGTCGCTGCAAGGCGCCGATCTGACCGGCGTGGACCTCTCGGGAATGGAC
TTGCGCGGCGCGCGCCTGGCCGGCGCGATGCTGGAGAACGCCGATTTGAGCGACGCCGATCTGACGGGCGCGGATCTGTC
GCGCACGGTGCTCGTGCGCGCCGATCTGACACGTGCGAAGCTCGTCGATGCGCGCCTGACGGCGGCCAATCTGTCGCTCG
CGCATTGCGAGCGGACGGATTTCTCCGGCTCGGATTTGAGTGACGGCATTTTCGAGCAGGTACACCTACGAGATTGCCGC
TTCAACGGCAGCGTGCTGGCGAGCACGCGCTTCGACGCGTGCCGGTTCGATGCCGTCGATTTCGGTCGCGCGACGCTGCG
CGAGCTGATCTTCATCGAACAATCGTTCAGCGGCGTGAGCTTCTCGGATGCGACGATCCGCAAGATGCTGCTGATGCGTT
GCGCGTTCGCCGACGTGCGGTTCTCGGCGGCGAGCATCGACGGATTCGGGATCGTCGAGACGCAGGCGAGCGGGCAGCTC
CGCTTCGATCGCGCGAGCGTGAACAAAGCGTGTTTCGTCGGGCGCTGCGACATCGGGCGCGCCGATTTCTCGTTCGCGAC
GCTGACGGAGGTCAATTTCCGCGAGACGCAGCTCGTCGAGGCGAACTTCGGCGGCGCGCGCATCGGCAATTGCGATTTCA
CCGATGCGTGCCTGCGGGCGGCCGATCTACGGGGCGCGAAGGCCGAGGGCAGCCCGTTCGTGCGCGCCGATCTCACGCGC
GCCGATCTTCGGGACACCGATCTGATCGCCGCGTATCTGCGCGGCGCGAAGCTGGACGGCGCGGACCTTCGGCGCGCCAA
CCTGTTTCGCGCGAACCTCTCGCAGATCCTCACCGATGCCGATACGCGCTGGCAGGGCGCGTACCTGAACCGGGCGGTGC
GGTTTCCGCTGGCGGAGGCGCGCACATGA

Upstream 100 bases:

>100_bases
AGCCTGACCGGGGTGAGCACCTCCGAAACGGGGACGAACATCGTGACGACCGGACTCACGGTATCAACGACCGGCGCGAG
CGTTTCGACGACCGGATTCA

Downstream 100 bases:

>100_bases
GCACGCGCGCGGATCGATTGCGCGACGCGATCCGGCATGGCCGCGCGATTCGCGACACCGCGATCGACGCGGGCGACTTC
GACGGGCACGACTGGTCGGG

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 862; Mature: 862

Protein sequence:

>862_residues
MRPKRSCRSPRRRRNANSSRASRSRCERTLARTPLHPMKIVKPLAISPLTRVYRMHGREYLGVAALLIATLGDEPKLLAE
SALWRLAGDELRGYPLDMALPKACPEFLVSGYAYGKYASDPHACACEVGVRIAGLEKRLRVCGDRQWAGARITAPRPFER
LPIDWDLAYGGAGCADNPRGRGAHAREGAPRDLPNVEYAHSPMRFAHEQPAPAGFCPVDAAWPARAGLYGALDRQWQEED
CPGFPRTLDPRYFNIAPADQQLPELRAFPDGARYELTHMHPDHATLAGNLPALRARSFVVRRGSDAPEEMPMRLTTAWFV
PHRERVILIYHGVTPVRAFDASDVQTVLFGAEASGHARPADWYRQVIEWRTRDDRAALYALRDRDLLPEHALAPEAAATP
EPTQQSAKQRQLRERLSVFPDAPRAQTPAPDRLAEFVEQQQALADEKRAALEAMRRELATSEVFSVGRRRGPPGRIAPAD
EEPARHAGALAESPDIRALERDADERLRGLYQQCAQHQDAPARLHGAAARARRECVASAAAAGQSLQGADLTGVDLSGMD
LRGARLAGAMLENADLSDADLTGADLSRTVLVRADLTRAKLVDARLTAANLSLAHCERTDFSGSDLSDGIFEQVHLRDCR
FNGSVLASTRFDACRFDAVDFGRATLRELIFIEQSFSGVSFSDATIRKMLLMRCAFADVRFSAASIDGFGIVETQASGQL
RFDRASVNKACFVGRCDIGRADFSFATLTEVNFRETQLVEANFGGARIGNCDFTDACLRAADLRGAKAEGSPFVRADLTR
ADLRDTDLIAAYLRGAKLDGADLRRANLFRANLSQILTDADTRWQGAYLNRAVRFPLAEART

Sequences:

>Translated_862_residues
MRPKRSCRSPRRRRNANSSRASRSRCERTLARTPLHPMKIVKPLAISPLTRVYRMHGREYLGVAALLIATLGDEPKLLAE
SALWRLAGDELRGYPLDMALPKACPEFLVSGYAYGKYASDPHACACEVGVRIAGLEKRLRVCGDRQWAGARITAPRPFER
LPIDWDLAYGGAGCADNPRGRGAHAREGAPRDLPNVEYAHSPMRFAHEQPAPAGFCPVDAAWPARAGLYGALDRQWQEED
CPGFPRTLDPRYFNIAPADQQLPELRAFPDGARYELTHMHPDHATLAGNLPALRARSFVVRRGSDAPEEMPMRLTTAWFV
PHRERVILIYHGVTPVRAFDASDVQTVLFGAEASGHARPADWYRQVIEWRTRDDRAALYALRDRDLLPEHALAPEAAATP
EPTQQSAKQRQLRERLSVFPDAPRAQTPAPDRLAEFVEQQQALADEKRAALEAMRRELATSEVFSVGRRRGPPGRIAPAD
EEPARHAGALAESPDIRALERDADERLRGLYQQCAQHQDAPARLHGAAARARRECVASAAAAGQSLQGADLTGVDLSGMD
LRGARLAGAMLENADLSDADLTGADLSRTVLVRADLTRAKLVDARLTAANLSLAHCERTDFSGSDLSDGIFEQVHLRDCR
FNGSVLASTRFDACRFDAVDFGRATLRELIFIEQSFSGVSFSDATIRKMLLMRCAFADVRFSAASIDGFGIVETQASGQL
RFDRASVNKACFVGRCDIGRADFSFATLTEVNFRETQLVEANFGGARIGNCDFTDACLRAADLRGAKAEGSPFVRADLTR
ADLRDTDLIAAYLRGAKLDGADLRRANLFRANLSQILTDADTRWQGAYLNRAVRFPLAEART
>Mature_862_residues
MRPKRSCRSPRRRRNANSSRASRSRCERTLARTPLHPMKIVKPLAISPLTRVYRMHGREYLGVAALLIATLGDEPKLLAE
SALWRLAGDELRGYPLDMALPKACPEFLVSGYAYGKYASDPHACACEVGVRIAGLEKRLRVCGDRQWAGARITAPRPFER
LPIDWDLAYGGAGCADNPRGRGAHAREGAPRDLPNVEYAHSPMRFAHEQPAPAGFCPVDAAWPARAGLYGALDRQWQEED
CPGFPRTLDPRYFNIAPADQQLPELRAFPDGARYELTHMHPDHATLAGNLPALRARSFVVRRGSDAPEEMPMRLTTAWFV
PHRERVILIYHGVTPVRAFDASDVQTVLFGAEASGHARPADWYRQVIEWRTRDDRAALYALRDRDLLPEHALAPEAAATP
EPTQQSAKQRQLRERLSVFPDAPRAQTPAPDRLAEFVEQQQALADEKRAALEAMRRELATSEVFSVGRRRGPPGRIAPAD
EEPARHAGALAESPDIRALERDADERLRGLYQQCAQHQDAPARLHGAAARARRECVASAAAAGQSLQGADLTGVDLSGMD
LRGARLAGAMLENADLSDADLTGADLSRTVLVRADLTRAKLVDARLTAANLSLAHCERTDFSGSDLSDGIFEQVHLRDCR
FNGSVLASTRFDACRFDAVDFGRATLRELIFIEQSFSGVSFSDATIRKMLLMRCAFADVRFSAASIDGFGIVETQASGQL
RFDRASVNKACFVGRCDIGRADFSFATLTEVNFRETQLVEANFGGARIGNCDFTDACLRAADLRGAKAEGSPFVRADLTR
ADLRDTDLIAAYLRGAKLDGADLRRANLFRANLSQILTDADTRWQGAYLNRAVRFPLAEART

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 94968; Mature: 94968

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: PS00036 BZIP_BASIC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPKRSCRSPRRRRNANSSRASRSRCERTLARTPLHPMKIVKPLAISPLTRVYRMHGREY
CCCCHHHCCHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHH
LGVAALLIATLGDEPKLLAESALWRLAGDELRGYPLDMALPKACPEFLVSGYAYGKYASD
HHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
PHACACEVGVRIAGLEKRLRVCGDRQWAGARITAPRPFERLPIDWDLAYGGAGCADNPRG
CCCCHHHHCCEEECHHHHHHHHCCCCCCCCEECCCCCHHHCCCCEEECCCCCCCCCCCCC
RGAHAREGAPRDLPNVEYAHSPMRFAHEQPAPAGFCPVDAAWPARAGLYGALDRQWQEED
CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCC
CPGFPRTLDPRYFNIAPADQQLPELRAFPDGARYELTHMHPDHATLAGNLPALRARSFVV
CCCCCCCCCCCEEECCCCHHHCHHHHCCCCCCCEEEEEECCCCCHHCCCCCHHHHHHHHH
RRGSDAPEEMPMRLTTAWFVPHRERVILIYHGVTPVRAFDASDVQTVLFGAEASGHARPA
CCCCCCHHHCCCEEEEEEECCCCCEEEEEEECCCCEEECCCCCCEEEEEECCCCCCCCCH
DWYRQVIEWRTRDDRAALYALRDRDLLPEHALAPEAAATPEPTQQSAKQRQLRERLSVFP
HHHHHHHHHCCCCCCEEEEEECCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
DAPRAQTPAPDRLAEFVEQQQALADEKRAALEAMRRELATSEVFSVGRRRGPPGRIAPAD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
EEPARHAGALAESPDIRALERDADERLRGLYQQCAQHQDAPARLHGAAARARRECVASAA
CCHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
AAGQSLQGADLTGVDLSGMDLRGARLAGAMLENADLSDADLTGADLSRTVLVRADLTRAK
HCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCHHHH
LVDARLTAANLSLAHCERTDFSGSDLSDGIFEQVHLRDCRFNGSVLASTRFDACRFDAVD
HHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHH
FGRATLRELIFIEQSFSGVSFSDATIRKMLLMRCAFADVRFSAASIDGFGIVETQASGQL
CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEECCCCCE
RFDRASVNKACFVGRCDIGRADFSFATLTEVNFRETQLVEANFGGARIGNCDFTDACLRA
EEEHHCCCCEEEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCEECCCCHHHHHHHH
ADLRGAKAEGSPFVRADLTRADLRDTDLIAAYLRGAKLDGADLRRANLFRANLSQILTDA
HHCCCCCCCCCCCEEECCCHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
DTRWQGAYLNRAVRFPLAEART
CCCCCHHHHHHHHHCCCHHCCC
>Mature Secondary Structure
MRPKRSCRSPRRRRNANSSRASRSRCERTLARTPLHPMKIVKPLAISPLTRVYRMHGREY
CCCCHHHCCHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHH
LGVAALLIATLGDEPKLLAESALWRLAGDELRGYPLDMALPKACPEFLVSGYAYGKYASD
HHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
PHACACEVGVRIAGLEKRLRVCGDRQWAGARITAPRPFERLPIDWDLAYGGAGCADNPRG
CCCCHHHHCCEEECHHHHHHHHCCCCCCCCEECCCCCHHHCCCCEEECCCCCCCCCCCCC
RGAHAREGAPRDLPNVEYAHSPMRFAHEQPAPAGFCPVDAAWPARAGLYGALDRQWQEED
CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCC
CPGFPRTLDPRYFNIAPADQQLPELRAFPDGARYELTHMHPDHATLAGNLPALRARSFVV
CCCCCCCCCCCEEECCCCHHHCHHHHCCCCCCCEEEEEECCCCCHHCCCCCHHHHHHHHH
RRGSDAPEEMPMRLTTAWFVPHRERVILIYHGVTPVRAFDASDVQTVLFGAEASGHARPA
CCCCCCHHHCCCEEEEEEECCCCCEEEEEEECCCCEEECCCCCCEEEEEECCCCCCCCCH
DWYRQVIEWRTRDDRAALYALRDRDLLPEHALAPEAAATPEPTQQSAKQRQLRERLSVFP
HHHHHHHHHCCCCCCEEEEEECCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
DAPRAQTPAPDRLAEFVEQQQALADEKRAALEAMRRELATSEVFSVGRRRGPPGRIAPAD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
EEPARHAGALAESPDIRALERDADERLRGLYQQCAQHQDAPARLHGAAARARRECVASAA
CCHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
AAGQSLQGADLTGVDLSGMDLRGARLAGAMLENADLSDADLTGADLSRTVLVRADLTRAK
HCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCHHHH
LVDARLTAANLSLAHCERTDFSGSDLSDGIFEQVHLRDCRFNGSVLASTRFDACRFDAVD
HHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHH
FGRATLRELIFIEQSFSGVSFSDATIRKMLLMRCAFADVRFSAASIDGFGIVETQASGQL
CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEECCCCCE
RFDRASVNKACFVGRCDIGRADFSFATLTEVNFRETQLVEANFGGARIGNCDFTDACLRA
EEEHHCCCCEEEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCEECCCCHHHHHHHH
ADLRGAKAEGSPFVRADLTRADLRDTDLIAAYLRGAKLDGADLRRANLFRANLSQILTDA
HHCCCCCCCCCCCEEECCCHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
DTRWQGAYLNRAVRFPLAEART
CCCCCHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA