| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is 76819123
Identifier: 76819123
GI number: 76819123
Start: 1347279
End: 1349579
Strand: Direct
Name: 76819123
Synonym: BURPS1710b_A1080
Alternate gene names: NA
Gene position: 1347279-1349579 (Clockwise)
Preceding gene: 76819694
Following gene: 76819719
Centisome position: 42.34
GC content: 67.41
Gene sequence:
>2301_bases GTGAAGGAAATCGTGTTGTCCGCCGTGTTTGTCCGCCGCGTTGTCCGCAATCGCAACGACACGCGGCCCGATGCAACGCC GTGCGGGTCGCGGAACGGTTTGCGGCGCGTCGAACGCGGTCTTTTCGCGCGCCATATGAATGGGATTCCTAAGCATTTGA CGCGCGGCGGCCGTATGTGCCGGGTCCGCTCGGCGCGCACGCCGGGCGAAACGGCACCGCGCCGCCGCCGTCCATCGAAG GGAGAAAATCATGTCACCGTGAACGCCCGCCTCGCCGCATCGCCATGCATCGGCTGCACGCCGCGCGTCCCTATCCGCCG GAGCGCGTCGTCGCATCTTTCCTCATCGTTTTCCTGGGGCTTCAAAATGCAGAGAACTCAGCATGTCAACCGGCTATTCT CGAAACGCTTCGCGCTGTCGCCGCTACCGCTGGCGATCGCCGTCGCGCTGTCCCCGCTTCTCGCGCACGCGGCGCCCGAC TGGGTGCCCACCCGCACCGACGCGTTCCTGATCGCGCGCGCGCCCGCCGCGGCCGCCTCGCAGACGCTCGCGAAGACCGC GCCGAGCTACGCGCTCAACATGATCGGCACGCCCGAGCTCGCCGACACGAATGTCACGCCGCTCGAGCTGAGCCAGCCGC TGCGCGTGACCATCGTGCTGAAAAGCCGCAACGAAGCGCAGCTCGATTCGCTCGTGCGCGAAGTGAACCAGCCGGGCAGC GCGAACTATCGCAAGTACCTCACGCCCGAGCAGTTCAAGGCGCGCTTCGCGCCGACCGACGCCCAGGTGCGGGCCGTCGT CGCGCATCTGAAGGCGAACGGCTTCGGCGACATCACGGTGTCGGCAAACAACAAGCTGATCTTCGCGCAAGGCAACGCGT CGAACGCGGAACACGGCTTCCACACGACGCTCAAGCGCTTCAGCTATCGCGGCAAGGCGGTCTATGCGAACGACTCGGCC GCGCTCGTTCCCGCATCGCTGAGCCCGGTCGTCGAATCGGTGCTCGGGCTGCAGAGCGCGGCCGTTCCGCATCGGCTCAT CCATCGCGGCACGCCGGCCGACGCGCGCATCCAGACCGACGCGATCACGAAGAACGCGACGGCGAGCGGCACGCAAACCG GCCATCAGCCGACCGATTTCGCGCAGATCTACAATGCGAGCGGCCTGCCCGCCGCGACCAACACGACGGTCGGGATCATC ACGTGGGGCGACATGACGCAGACGATCGCCGATCTGAACACGTTCACGCGAAACGCGGGCCTGCCGAACGTGAACACCGC GGTCGTCGCGGGCAGCTCGGGCACGCTCGCGGACGACGGCGATCCGGGCGAATGGGATCTCGACAGCCAGACGATCATCG GCACGTCGGGCGGCGTGAAGCAATTGATCTTCTATGCGGCCGTCAACGGCGACAGCAACGACAGCGGCCTCACCAACGCG ACGCTGACCGCCGCATACAACAAGGCCGTCACCGACAACGTCGCGAAGGTGATCAACGTATCGCTCGGCGAGGACGAGGC GGCCGCGAATTCGGACGGCTCGCTCGCCGCGAACGACGCGGTGTTCAAGCAGGCGGTCGCGCAAGGGCAGATCTTCTCGG TGTCGTCCGGCGACGCGGGCGTCTATCAGTGGTCGACTTCGCCATACGGCGCGCCGGGCTACGTCGGCACCTACAGCGGC GGCAAGGTGACGACGAAGATCAATCTGGCGAAGTACAGCGTGTCGTCGCCGGCGAGCTCGCCGTACGTCGTCGCGGTCGG CGGCACGACGTTGTCGACGAGCGGCACGACGACCTGGGCCGGCGAGACCGTCTGGAACGAAGGGCTCGCCTATGCGGACG TGAGCAGCAGCGGCCAGCCGCTCGACAACGCGGTGCGGCTATGGGCGACGGGCGGCGGCGTGAGCGGCTACGAAGCGGCG CCGAGCTGGCAGACGGCCGCGCTCGGCAGCTCGGTGACGAAGCGCGTCGTGCCGGACGTCGCGTTCGACGCCGCGCAATC GACGGGCGCGTATCTCGTGATCAACGGCCAGCCGAACCAGTTGGTCGGCGGCACGAGCCTCGCGTCGCCGATCTTCGTCG GCGGCTGGGCGCGCGTGGAATCGGCGAACGGCAACGGTCTCGGCCTGCCGACGTCGGCGTTCTACCAGGGCCTGCCGGGC AATCCGTCGCTCGTCCACGACGTGACGTCGGGTAACAACGGCTACAACAGCTACGGCTACAGCGCGAAATCCGGATGGGA CGACGACACCGGCTTCGGCAGTCTCGACTTCGCGAAGGTCAGCGCGAGCTCGGTCAAGTAG
Upstream 100 bases:
>100_bases ATCGGTGGCGCGGCTCGCTTCATGCATCAGGCGGCCCGCCCCGTTCCGGCCGCCTCACGAAACGCGTGATCGATCTCGCG CGCCGCTTCGTCGCGGCTGC
Downstream 100 bases:
>100_bases TGGGCGGGAATCGCCGCGCGTCGCCCGTTCGGGATGCGCGGCGGTGTCCGCGCGCATCGGGCGGCGCGCGGGCTTGCTGG CAAGTCCGCGTCGCCCGCGC
Product: sedolisin-B
Products: NA
Alternate protein names: Carboxyl proteinase; XCP; Xanthomonapepsin; Xanthomonas aspartic proteinase [H]
Number of amino acids: Translated: 766; Mature: 766
Protein sequence:
>766_residues MKEIVLSAVFVRRVVRNRNDTRPDATPCGSRNGLRRVERGLFARHMNGIPKHLTRGGRMCRVRSARTPGETAPRRRRPSK GENHVTVNARLAASPCIGCTPRVPIRRSASSHLSSSFSWGFKMQRTQHVNRLFSKRFALSPLPLAIAVALSPLLAHAAPD WVPTRTDAFLIARAPAAAASQTLAKTAPSYALNMIGTPELADTNVTPLELSQPLRVTIVLKSRNEAQLDSLVREVNQPGS ANYRKYLTPEQFKARFAPTDAQVRAVVAHLKANGFGDITVSANNKLIFAQGNASNAEHGFHTTLKRFSYRGKAVYANDSA ALVPASLSPVVESVLGLQSAAVPHRLIHRGTPADARIQTDAITKNATASGTQTGHQPTDFAQIYNASGLPAATNTTVGII TWGDMTQTIADLNTFTRNAGLPNVNTAVVAGSSGTLADDGDPGEWDLDSQTIIGTSGGVKQLIFYAAVNGDSNDSGLTNA TLTAAYNKAVTDNVAKVINVSLGEDEAAANSDGSLAANDAVFKQAVAQGQIFSVSSGDAGVYQWSTSPYGAPGYVGTYSG GKVTTKINLAKYSVSSPASSPYVVAVGGTTLSTSGTTTWAGETVWNEGLAYADVSSSGQPLDNAVRLWATGGGVSGYEAA PSWQTAALGSSVTKRVVPDVAFDAAQSTGAYLVINGQPNQLVGGTSLASPIFVGGWARVESANGNGLGLPTSAFYQGLPG NPSLVHDVTSGNNGYNSYGYSAKSGWDDDTGFGSLDFAKVSASSVK
Sequences:
>Translated_766_residues MKEIVLSAVFVRRVVRNRNDTRPDATPCGSRNGLRRVERGLFARHMNGIPKHLTRGGRMCRVRSARTPGETAPRRRRPSK GENHVTVNARLAASPCIGCTPRVPIRRSASSHLSSSFSWGFKMQRTQHVNRLFSKRFALSPLPLAIAVALSPLLAHAAPD WVPTRTDAFLIARAPAAAASQTLAKTAPSYALNMIGTPELADTNVTPLELSQPLRVTIVLKSRNEAQLDSLVREVNQPGS ANYRKYLTPEQFKARFAPTDAQVRAVVAHLKANGFGDITVSANNKLIFAQGNASNAEHGFHTTLKRFSYRGKAVYANDSA ALVPASLSPVVESVLGLQSAAVPHRLIHRGTPADARIQTDAITKNATASGTQTGHQPTDFAQIYNASGLPAATNTTVGII TWGDMTQTIADLNTFTRNAGLPNVNTAVVAGSSGTLADDGDPGEWDLDSQTIIGTSGGVKQLIFYAAVNGDSNDSGLTNA TLTAAYNKAVTDNVAKVINVSLGEDEAAANSDGSLAANDAVFKQAVAQGQIFSVSSGDAGVYQWSTSPYGAPGYVGTYSG GKVTTKINLAKYSVSSPASSPYVVAVGGTTLSTSGTTTWAGETVWNEGLAYADVSSSGQPLDNAVRLWATGGGVSGYEAA PSWQTAALGSSVTKRVVPDVAFDAAQSTGAYLVINGQPNQLVGGTSLASPIFVGGWARVESANGNGLGLPTSAFYQGLPG NPSLVHDVTSGNNGYNSYGYSAKSGWDDDTGFGSLDFAKVSASSVK >Mature_766_residues MKEIVLSAVFVRRVVRNRNDTRPDATPCGSRNGLRRVERGLFARHMNGIPKHLTRGGRMCRVRSARTPGETAPRRRRPSK GENHVTVNARLAASPCIGCTPRVPIRRSASSHLSSSFSWGFKMQRTQHVNRLFSKRFALSPLPLAIAVALSPLLAHAAPD WVPTRTDAFLIARAPAAAASQTLAKTAPSYALNMIGTPELADTNVTPLELSQPLRVTIVLKSRNEAQLDSLVREVNQPGS ANYRKYLTPEQFKARFAPTDAQVRAVVAHLKANGFGDITVSANNKLIFAQGNASNAEHGFHTTLKRFSYRGKAVYANDSA ALVPASLSPVVESVLGLQSAAVPHRLIHRGTPADARIQTDAITKNATASGTQTGHQPTDFAQIYNASGLPAATNTTVGII TWGDMTQTIADLNTFTRNAGLPNVNTAVVAGSSGTLADDGDPGEWDLDSQTIIGTSGGVKQLIFYAAVNGDSNDSGLTNA TLTAAYNKAVTDNVAKVINVSLGEDEAAANSDGSLAANDAVFKQAVAQGQIFSVSSGDAGVYQWSTSPYGAPGYVGTYSG GKVTTKINLAKYSVSSPASSPYVVAVGGTTLSTSGTTTWAGETVWNEGLAYADVSSSGQPLDNAVRLWATGGGVSGYEAA PSWQTAALGSSVTKRVVPDVAFDAAQSTGAYLVINGQPNQLVGGTSLASPIFVGGWARVESANGNGLGLPTSAFYQGLPG NPSLVHDVTSGNNGYNSYGYSAKSGWDDDTGFGSLDFAKVSASSVK
Specific function: Unknown
COG id: COG4934
COG function: function code O; Predicted protease
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PKD domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007280 - InterPro: IPR015366 - InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR022409 - InterPro: IPR000601 - InterPro: IPR009020 [H]
Pfam domain/function: PF00082 Peptidase_S8; PF00801 PKD; PF04151 PPC; PF09286 Pro-kuma_activ [H]
EC number: =3.4.21.101 [H]
Molecular weight: Translated: 80232; Mature: 80232
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEIVLSAVFVRRVVRNRNDTRPDATPCGSRNGLRRVERGLFARHMNGIPKHLTRGGRMC CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCEE RVRSARTPGETAPRRRRPSKGENHVTVNARLAASPCIGCTPRVPIRRSASSHLSSSFSWG EEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCC FKMQRTQHVNRLFSKRFALSPLPLAIAVALSPLLAHAAPDWVPTRTDAFLIARAPAAAAS EEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHH QTLAKTAPSYALNMIGTPELADTNVTPLELSQPLRVTIVLKSRNEAQLDSLVREVNQPGS HHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCC ANYRKYLTPEQFKARFAPTDAQVRAVVAHLKANGFGDITVSANNKLIFAQGNASNAEHGF CCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCCCCHH HTTLKRFSYRGKAVYANDSAALVPASLSPVVESVLGLQSAAVPHRLIHRGTPADARIQTD HHHHHHHCCCCCEEEECCCCEEECCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEH AITKNATASGTQTGHQPTDFAQIYNASGLPAATNTTVGIITWGDMTQTIADLNTFTRNAG HCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCC LPNVNTAVVAGSSGTLADDGDPGEWDLDSQTIIGTSGGVKQLIFYAAVNGDSNDSGLTNA CCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCE TLTAAYNKAVTDNVAKVINVSLGEDEAAANSDGSLAANDAVFKQAVAQGQIFSVSSGDAG EEEEHHHHHHHHHHHHHEEEECCCCHHCCCCCCCEECHHHHHHHHHHCCCEEEECCCCCC VYQWSTSPYGAPGYVGTYSGGKVTTKINLAKYSVSSPASSPYVVAVGGTTLSTSGTTTWA EEEECCCCCCCCCCEEECCCCEEEEEEEEEEEECCCCCCCCEEEEECCEEEECCCCCEEC GETVWNEGLAYADVSSSGQPLDNAVRLWATGGGVSGYEAAPSWQTAALGSSVTKRVVPDV CCHHHHCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCHH AFDAAQSTGAYLVINGQPNQLVGGTSLASPIFVGGWARVESANGNGLGLPTSAFYQGLPG HHHHHCCCCCEEEECCCCCCEECCCCCCCCEEECCEEEEECCCCCCCCCCHHHHHCCCCC NPSLVHDVTSGNNGYNSYGYSAKSGWDDDTGFGSLDFAKVSASSVK CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC >Mature Secondary Structure MKEIVLSAVFVRRVVRNRNDTRPDATPCGSRNGLRRVERGLFARHMNGIPKHLTRGGRMC CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCEE RVRSARTPGETAPRRRRPSKGENHVTVNARLAASPCIGCTPRVPIRRSASSHLSSSFSWG EEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCC FKMQRTQHVNRLFSKRFALSPLPLAIAVALSPLLAHAAPDWVPTRTDAFLIARAPAAAAS EEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHH QTLAKTAPSYALNMIGTPELADTNVTPLELSQPLRVTIVLKSRNEAQLDSLVREVNQPGS HHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCC ANYRKYLTPEQFKARFAPTDAQVRAVVAHLKANGFGDITVSANNKLIFAQGNASNAEHGF CCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCCCCHH HTTLKRFSYRGKAVYANDSAALVPASLSPVVESVLGLQSAAVPHRLIHRGTPADARIQTD HHHHHHHCCCCCEEEECCCCEEECCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEH AITKNATASGTQTGHQPTDFAQIYNASGLPAATNTTVGIITWGDMTQTIADLNTFTRNAG HCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCC LPNVNTAVVAGSSGTLADDGDPGEWDLDSQTIIGTSGGVKQLIFYAAVNGDSNDSGLTNA CCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCE TLTAAYNKAVTDNVAKVINVSLGEDEAAANSDGSLAANDAVFKQAVAQGQIFSVSSGDAG EEEEHHHHHHHHHHHHHEEEECCCCHHCCCCCCCEECHHHHHHHHHHCCCEEEECCCCCC VYQWSTSPYGAPGYVGTYSGGKVTTKINLAKYSVSSPASSPYVVAVGGTTLSTSGTTTWA EEEECCCCCCCCCCEEECCCCEEEEEEEEEEEECCCCCCCCEEEEECCEEEECCCCCEEC GETVWNEGLAYADVSSSGQPLDNAVRLWATGGGVSGYEAAPSWQTAALGSSVTKRVVPDV CCHHHHCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCHH AFDAAQSTGAYLVINGQPNQLVGGTSLASPIFVGGWARVESANGNGLGLPTSAFYQGLPG HHHHHCCCCCEEEECCCCCCEECCCCCCCCEEECCEEEEECCCCCCCCCCHHHHHCCCCC NPSLVHDVTSGNNGYNSYGYSAKSGWDDDTGFGSLDFAKVSASSVK CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8902622; 10488127 [H]