| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is 76819719
Identifier: 76819719
GI number: 76819719
Start: 1350380
End: 1352143
Strand: Direct
Name: 76819719
Synonym: BURPS1710b_A1081
Alternate gene names: NA
Gene position: 1350380-1352143 (Clockwise)
Preceding gene: 76819123
Following gene: 76817710
Centisome position: 42.44
GC content: 71.26
Gene sequence:
>1764_bases ATGCAAAAACTGTTCAATAAATCGGCCATCGCAATCGGCATTTCCACCCTTCTCGTTCTGTCCGGCTGCGGCTCGGTCGA CGGCCCGTCGCTGTCGGCCAGCGGCGTCAAGCCCGCCACCGTCGGCAATACGGGGACTTCGGGGACGTCCGGCACTTCCG GTACGTCGGGTACTTCCGGCACGTCCGGCACCTCCGGTACGTCAGGTACTTCCGGCACGTCCGGCACCTCCGGTACGTCC GGCACCTCCGGTACGTCTGGCACGTCCGGTACGTCTGGCACCTCCGGCACCTCCGGCACGTCGGGTACTTCCGGTACGTC TGGCACCTCCGGCACGTCTGGCACCTCCGGTACGTCCGGCACCTCCGGCACGTCTGGCACCTCCGGTACGTCCGGCACCT CCGGCACCTCCGGCACGTCTGGCACGTCCGGTACGTCTGGCACCTCCGGCACGTCGGGTACTTCCGGCACGTCGGGCACC TCCGGTACGTCGGGTACTTCCGGTACGTCCGGTACCTCTGGCACGTCAGGCACCTCCGGTACGTCGGGTACCTCCGGCAC GTCAGGCACTTCCGGTACGTCGGGCACGTCCGGCACCGCCTCCTCCCCGCTCGGCAACATCCTCGCGCAAACCGGCAACC TGATCACCGCGACGGGCACCGTCGTCTCCGCCACCGGCAACCAAATCTCCGGCACGTCGGTGCCGGGCGTGAACGGCGCG ACGACGACGAACCTCGGCAACGCCGTCAGCTCGCTCGGCAACGGCGTCCAGACGCTCGGCAACGGCACAGCCGCCGGCCT CGGCACGCTCGGCACGTCGACGAATCCGCTCGGCCCGACGCTCACGTCGACCTCCGGCGTCGTCTCGAACGTCGGCAACG CGGTCTCGTCGCTCGGCGGCGTCGTGACGAGCATCGGCACCGGCCCGCTCGCGCCGCTCGCGCCCGTCACGTCGCCGCTC GGCGGCGCGGTCGGCACGCTCGGCAGCACCGTCACGCAAGTCGGCTCCGGCCTGAACAACGTGCTCACGAGCGCCCCCGT CCAGCAGCTCGAAACCGGCGTCAGCTCGATCATCAACCCGATCTCGAACGTCGTTTCCGGCACGACGCAGACGATCGGCA CCGCCACCGGGCTCGGCGCACCCGTCAATAATCTGCTGACCACCGTCGGCAATGGGCTGAACGCGGCCGGCGCGAAGGTG TCGGGCTCGACGAACAACCAGGTGGTGCAGGCGGTCGGCGGCGTCGTCAGCCAGCTCGGCAACACGGTCACGAGCGTCGG CGGTCTGCTGACGGGCGGCACCACCAACCCGCTCGCACCGATCACCGGCGCGCTGTCCGGCGGCGCCACCAACCCGCTCG CGCCGATCACCGGCATCGCCGGTTCGCTGAGCGGCACGCTCGGCGCCAACGCGGGCCTGAACGCAGGCGCGACGCAACCC GGCACGACGACGAACCCGCTCGCCCCCGTCACCGGCCTGCTCGGCGGCCTGTCGGGTTCGGCGGGCGGCAACGCGGCGGC CGGCCTCACCGCCGTGCTCGCGCCCATCACGAATGTCGTCGGCTCGCTGACCGCCGGCGTGAACGGCACCGTCGCCGCCC CGTCGCCCGCCCCGACCACCGGCTCGACGACGACCGCGCCCGCCACGGGTGTGGTCGGCAGCCTGACGGGCGGCACGACC GCGAGCGGCACGTCGACGACGAACCTGCTCGCGCCCGTGACCAACCTGATCGGCGGGCTGCTCGGCGGCGTGTCGGGCAA GTAG
Upstream 100 bases:
>100_bases ATATTTTTTATACATTAACGAAGATAAACTCTACGAAATAATCAATGGTACGAAAATTGCATCGACGACTGGCATCGTGA GATTTATCTGGGAGCTCGTC
Downstream 100 bases:
>100_bases CGCGCAGGCAAGCCGAACGGCGCGGCGGCCGGGCCCAACCATTCCACATGCCCGGCCGCCCGCCGTCCATGTCATGACAC GGGGGATGACATGCAATCCA
Product: putative lipoprotein
Products: NA
Alternate protein names: Triple Helix Repeat-Containing Collagen; Hemagglutinin-Related Transmembrane Protein
Number of amino acids: Translated: 587; Mature: 587
Protein sequence:
>587_residues MQKLFNKSAIAIGISTLLVLSGCGSVDGPSLSASGVKPATVGNTGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTS GTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGT SGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTASSPLGNILAQTGNLITATGTVVSATGNQISGTSVPGVNGA TTTNLGNAVSSLGNGVQTLGNGTAAGLGTLGTSTNPLGPTLTSTSGVVSNVGNAVSSLGGVVTSIGTGPLAPLAPVTSPL GGAVGTLGSTVTQVGSGLNNVLTSAPVQQLETGVSSIINPISNVVSGTTQTIGTATGLGAPVNNLLTTVGNGLNAAGAKV SGSTNNQVVQAVGGVVSQLGNTVTSVGGLLTGGTTNPLAPITGALSGGATNPLAPITGIAGSLSGTLGANAGLNAGATQP GTTTNPLAPVTGLLGGLSGSAGGNAAAGLTAVLAPITNVVGSLTAGVNGTVAAPSPAPTTGSTTTAPATGVVGSLTGGTT ASGTSTTNLLAPVTNLIGGLLGGVSGK
Sequences:
>Translated_587_residues MQKLFNKSAIAIGISTLLVLSGCGSVDGPSLSASGVKPATVGNTGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTS GTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGT SGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTASSPLGNILAQTGNLITATGTVVSATGNQISGTSVPGVNGA TTTNLGNAVSSLGNGVQTLGNGTAAGLGTLGTSTNPLGPTLTSTSGVVSNVGNAVSSLGGVVTSIGTGPLAPLAPVTSPL GGAVGTLGSTVTQVGSGLNNVLTSAPVQQLETGVSSIINPISNVVSGTTQTIGTATGLGAPVNNLLTTVGNGLNAAGAKV SGSTNNQVVQAVGGVVSQLGNTVTSVGGLLTGGTTNPLAPITGALSGGATNPLAPITGIAGSLSGTLGANAGLNAGATQP GTTTNPLAPVTGLLGGLSGSAGGNAAAGLTAVLAPITNVVGSLTAGVNGTVAAPSPAPTTGSTTTAPATGVVGSLTGGTT ASGTSTTNLLAPVTNLIGGLLGGVSGK >Mature_587_residues MQKLFNKSAIAIGISTLLVLSGCGSVDGPSLSASGVKPATVGNTGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTS GTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGT SGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTASSPLGNILAQTGNLITATGTVVSATGNQISGTSVPGVNGA TTTNLGNAVSSLGNGVQTLGNGTAAGLGTLGTSTNPLGPTLTSTSGVVSNVGNAVSSLGGVVTSIGTGPLAPLAPVTSPL GGAVGTLGSTVTQVGSGLNNVLTSAPVQQLETGVSSIINPISNVVSGTTQTIGTATGLGAPVNNLLTTVGNGLNAAGAKV SGSTNNQVVQAVGGVVSQLGNTVTSVGGLLTGGTTNPLAPITGALSGGATNPLAPITGIAGSLSGTLGANAGLNAGATQP GTTTNPLAPVTGLLGGLSGSAGGNAAAGLTAVLAPITNVVGSLTAGVNGTVAAPSPAPTTGSTTTAPATGVVGSLTGGTT ASGTSTTNLLAPVTNLIGGLLGGVSGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI18780273, Length=162, Percent_Identity=35.1851851851852, Blast_Score=98, Evalue=2e-20, Organism=Homo sapiens, GI115392133, Length=161, Percent_Identity=36.0248447204969, Blast_Score=93, Evalue=6e-19, Organism=Homo sapiens, GI48762934, Length=158, Percent_Identity=36.7088607594937, Blast_Score=91, Evalue=4e-18, Organism=Homo sapiens, GI11386161, Length=158, Percent_Identity=36.7088607594937, Blast_Score=91, Evalue=4e-18, Organism=Homo sapiens, GI65301115, Length=185, Percent_Identity=32.972972972973, Blast_Score=90, Evalue=5e-18, Organism=Homo sapiens, GI111118972, Length=176, Percent_Identity=34.0909090909091, Blast_Score=89, Evalue=8e-18, Organism=Homo sapiens, GI111118968, Length=176, Percent_Identity=34.0909090909091, Blast_Score=89, Evalue=9e-18, Organism=Homo sapiens, GI56847616, Length=185, Percent_Identity=32.972972972973, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI111118970, Length=166, Percent_Identity=36.144578313253, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI5803080, Length=163, Percent_Identity=35.5828220858896, Blast_Score=88, Evalue=2e-17, Organism=Homo sapiens, GI89363017, Length=184, Percent_Identity=33.695652173913, Blast_Score=87, Evalue=4e-17, Organism=Homo sapiens, GI148536823, Length=174, Percent_Identity=37.9310344827586, Blast_Score=87, Evalue=5e-17, Organism=Homo sapiens, GI16357503, Length=174, Percent_Identity=37.9310344827586, Blast_Score=87, Evalue=6e-17, Organism=Homo sapiens, GI148536825, Length=168, Percent_Identity=35.7142857142857, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI183583553, Length=185, Percent_Identity=32.4324324324324, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI116256354, Length=190, Percent_Identity=33.1578947368421, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI38570075, Length=147, Percent_Identity=36.734693877551, Blast_Score=76, Evalue=7e-14, Organism=Homo sapiens, GI111118976, Length=189, Percent_Identity=30.6878306878307, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI38570073, Length=147, Percent_Identity=36.734693877551, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI111118974, Length=189, Percent_Identity=30.6878306878307, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI122937273, Length=185, Percent_Identity=31.3513513513514, Blast_Score=73, Evalue=7e-13, Organism=Homo sapiens, GI119508426, Length=188, Percent_Identity=31.3829787234043, Blast_Score=73, Evalue=7e-13, Organism=Homo sapiens, GI32140760, Length=124, Percent_Identity=37.9032258064516, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI100913220, Length=196, Percent_Identity=31.1224489795918, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI4502951, Length=204, Percent_Identity=27.4509803921569, Blast_Score=70, Evalue=8e-12, Organism=Homo sapiens, GI156616290, Length=178, Percent_Identity=31.4606741573034, Blast_Score=68, Evalue=3e-11, Organism=Homo sapiens, GI115527066, Length=108, Percent_Identity=37.037037037037, Blast_Score=67, Evalue=7e-11, Organism=Homo sapiens, GI115527070, Length=108, Percent_Identity=37.037037037037, Blast_Score=66, Evalue=8e-11, Organism=Caenorhabditis elegans, GI71992048, Length=162, Percent_Identity=38.8888888888889, Blast_Score=102, Evalue=7e-22, Organism=Caenorhabditis elegans, GI71988208, Length=218, Percent_Identity=33.4862385321101, Blast_Score=94, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71988210, Length=218, Percent_Identity=33.4862385321101, Blast_Score=94, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17569903, Length=188, Percent_Identity=31.9148936170213, Blast_Score=83, Evalue=3e-16, Organism=Caenorhabditis elegans, GI25153132, Length=135, Percent_Identity=36.2962962962963, Blast_Score=79, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17568913, Length=175, Percent_Identity=34.8571428571429, Blast_Score=79, Evalue=6e-15, Organism=Caenorhabditis elegans, GI17568911, Length=175, Percent_Identity=34.8571428571429, Blast_Score=78, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17551258, Length=147, Percent_Identity=34.6938775510204, Blast_Score=75, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17540820, Length=187, Percent_Identity=31.0160427807487, Blast_Score=72, Evalue=7e-13, Organism=Caenorhabditis elegans, GI71981657, Length=129, Percent_Identity=38.7596899224806, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17557218, Length=121, Percent_Identity=34.7107438016529, Blast_Score=69, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17507107, Length=158, Percent_Identity=32.2784810126582, Blast_Score=66, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17539916, Length=163, Percent_Identity=32.5153374233129, Blast_Score=66, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17532625, Length=162, Percent_Identity=33.9506172839506, Blast_Score=66, Evalue=6e-11, Organism=Drosophila melanogaster, GI17137252, Length=194, Percent_Identity=29.8969072164948, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI24581820, Length=170, Percent_Identity=33.5294117647059, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI24581822, Length=170, Percent_Identity=33.5294117647059, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI24581824, Length=170, Percent_Identity=33.5294117647059, Blast_Score=80, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52363; Mature: 52363
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKLFNKSAIAIGISTLLVLSGCGSVDGPSLSASGVKPATVGNTGTSGTSGTSGTSGTSG CCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TSGTSGTSGTSGTSGTSGTASSPLGNILAQTGNLITATGTVVSATGNQISGTSVPGVNGA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCEEEECCCCCCCCCCCCCCCCC TTTNLGNAVSSLGNGVQTLGNGTAAGLGTLGTSTNPLGPTLTSTSGVVSNVGNAVSSLGG CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH VVTSIGTGPLAPLAPVTSPLGGAVGTLGSTVTQVGSGLNNVLTSAPVQQLETGVSSIINP HHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH ISNVVSGTTQTIGTATGLGAPVNNLLTTVGNGLNAAGAKVSGSTNNQVVQAVGGVVSQLG HHHHHCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH NTVTSVGGLLTGGTTNPLAPITGALSGGATNPLAPITGIAGSLSGTLGANAGLNAGATQP HHHHHHCCEEECCCCCCCCHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC GTTTNPLAPVTGLLGGLSGSAGGNAAAGLTAVLAPITNVVGSLTAGVNGTVAAPSPAPTT CCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCC GSTTTAPATGVVGSLTGGTTASGTSTTNLLAPVTNLIGGLLGGVSGK CCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MQKLFNKSAIAIGISTLLVLSGCGSVDGPSLSASGVKPATVGNTGTSGTSGTSGTSGTSG CCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSGTSG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TSGTSGTSGTSGTSGTSGTASSPLGNILAQTGNLITATGTVVSATGNQISGTSVPGVNGA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCEEEECCCCCCCCCCCCCCCCC TTTNLGNAVSSLGNGVQTLGNGTAAGLGTLGTSTNPLGPTLTSTSGVVSNVGNAVSSLGG CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH VVTSIGTGPLAPLAPVTSPLGGAVGTLGSTVTQVGSGLNNVLTSAPVQQLETGVSSIINP HHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH ISNVVSGTTQTIGTATGLGAPVNNLLTTVGNGLNAAGAKVSGSTNNQVVQAVGGVVSQLG HHHHHCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH NTVTSVGGLLTGGTTNPLAPITGALSGGATNPLAPITGIAGSLSGTLGANAGLNAGATQP HHHHHHCCEEECCCCCCCCHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC GTTTNPLAPVTGLLGGLSGSAGGNAAAGLTAVLAPITNVVGSLTAGVNGTVAAPSPAPTT CCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCC GSTTTAPATGVVGSLTGGTTASGTSTTNLLAPVTNLIGGLLGGVSGK CCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA