| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is hrpB1
Identifier: 76818691
GI number: 76818691
Start: 864789
End: 865277
Strand: Direct
Name: hrpB1
Synonym: BURPS1710b_A0663
Alternate gene names: NA
Gene position: 864789-865277 (Clockwise)
Preceding gene: 76819140
Following gene: 76819444
Centisome position: 27.18
GC content: 70.55
Gene sequence:
>489_bases ATGGCGATCCAATCGTGCAACCAGGCCGCGTTGCGCACGCTGCTCTCGGTCTTTTCGGCCGGGCTGCGCGCGGGCGCGCA CGCGGACCTCGACGAACTGCTGCTCGCGCTGCGCATCTTGCAGCCGCGCAACGCCGCGCCCGAGCTCTGCGACGTGCGGC TGCGGATCGGCCGGCGCGACTGGCTCGGCGCGCTGCATATCCTGCGCACGCTCGAGGAACAGGAGCGCGGCACGCCGCTC TGCGCAGCGCTGCAAAGCTGGTGCCTGTATGCGCTGCAGGACGACGATTGGCGACGCTATGCGCAGACCGTGCTGCTGAC GGGCGATCACGCGTCGACGGTGCTCGTCGGGCGCTTCCTCAAGGTCGACGAGCTCGTGGCGCTCGGCGCCGCCGGCCACG ACGACGACGTCGCCACGCGCATCGCGCAACTGCTGCGGCTCGACCGCTATCAGTGGGCGCGGCATGCGCATGCGAGCGGG ATTGCTTGA
Upstream 100 bases:
>100_bases TTCGCCGCGCACGCCTTCGCTTCGCACGCGGCGCTCGCTCGCGCGCGCGTGAAGGCGATCATCGTCGGCGGCTCATCTCT TCTCGACGCATCGCACCGAC
Downstream 100 bases:
>100_bases GGATTCGAGGGGGATCGGCACGCGGGTTTCGGTGTTGGTCGGGCGTGGAGCGCGGTTTGCAGTTCACGGTTCACGGTTCA CGGTTCACGGTTCACGGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MAIQSCNQAALRTLLSVFSAGLRAGAHADLDELLLALRILQPRNAAPELCDVRLRIGRRDWLGALHILRTLEEQERGTPL CAALQSWCLYALQDDDWRRYAQTVLLTGDHASTVLVGRFLKVDELVALGAAGHDDDVATRIAQLLRLDRYQWARHAHASG IA
Sequences:
>Translated_162_residues MAIQSCNQAALRTLLSVFSAGLRAGAHADLDELLLALRILQPRNAAPELCDVRLRIGRRDWLGALHILRTLEEQERGTPL CAALQSWCLYALQDDDWRRYAQTVLLTGDHASTVLVGRFLKVDELVALGAAGHDDDVATRIAQLLRLDRYQWARHAHASG IA >Mature_161_residues AIQSCNQAALRTLLSVFSAGLRAGAHADLDELLLALRILQPRNAAPELCDVRLRIGRRDWLGALHILRTLEEQERGTPLC AALQSWCLYALQDDDWRRYAQTVLLTGDHASTVLVGRFLKVDELVALGAAGHDDDVATRIAQLLRLDRYQWARHAHASGI A
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17972; Mature: 17841
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIQSCNQAALRTLLSVFSAGLRAGAHADLDELLLALRILQPRNAAPELCDVRLRIGRRD CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHH WLGALHILRTLEEQERGTPLCAALQSWCLYALQDDDWRRYAQTVLLTGDHASTVLVGRFL HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHH KVDELVALGAAGHDDDVATRIAQLLRLDRYQWARHAHASGIA HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AIQSCNQAALRTLLSVFSAGLRAGAHADLDELLLALRILQPRNAAPELCDVRLRIGRRD CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHH WLGALHILRTLEEQERGTPLCAALQSWCLYALQDDDWRRYAQTVLLTGDHASTVLVGRFL HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHH KVDELVALGAAGHDDDVATRIAQLLRLDRYQWARHAHASGIA HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA