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The map label for this gene is 76818451

Identifier: 76818451

GI number: 76818451

Start: 97277

End: 97966

Strand: Direct

Name: 76818451

Synonym: BURPS1710b_A0073

Alternate gene names: NA

Gene position: 97277-97966 (Clockwise)

Preceding gene: 76819167

Following gene: 76817516

Centisome position: 3.06

GC content: 72.17

Gene sequence:

>690_bases
ATGGGCCGCGCCGGCACGGATGGCGCCGCGCGATGCGCTCATAATGACCGTCGACGCCTCACTCTTTCGCCCGTGGCCGC
CATGACGCTCGCCATCGTCGTCCTGAACGTGATCGGTTTCTTCGTCGAGCTCGCCGCGCCCGAGCGCGTGCTGTCGCTGT
TCGCGCTATGGCCGCCGCGCGCGGGCGCGGGCTTGCCGCCCGCCGCCGCGCCCGCGTTCCATGTCTGGCAGCTCGTCACG
TACAGCGCGCTGCACGCGGGGCTGTCGCACCTGCTGTTCAACATGCTCGGGCTCGTGATGTTCGGCCGCGATGTCGAGCG
CGCGCTCGGCCGCGCGCGCTTCGGCGCGCTGTATCTCGCGAGCGTCGTATGCGGCGCGCTCACGCAGCTCGCGCTCGCGC
GCTATTCGGCGGCGGCCGCCGCGCCGACGATCGGCGCGTCCGCCGGCGTGTTCGGCGTGCTCGCCGCGTACGCGCTGCTG
TACCCGTCGCGCCGCGTCGTGCTGCTGATTCCGCCGATTCCGATGCGCGCGTGGGTGTTCGCGCTGCTCTACGCGGGGGG
CGAACTGCTGCTCGGCGTCGCGGGCGCGGCAAGCGGCATCGCGCATTTCGCGCATCTGGGCGGGATGTTCGGCGCGATCG
CGCTGATGCTGGCATGGGGACGGCCGCGCAGCGAATGGCCGGTTCAATGA

Upstream 100 bases:

>100_bases
GGATCACGTGGATCAGGTGAATCACGTTGACGGCGTTGAACGGCGGGTCGGCCGCCGCGCGGGCGGCTGCGCCGCGAACC
CGTGCGCGACGGCGCGCGGA

Downstream 100 bases:

>100_bases
GCGCGGTTCAACGAGCGCGCGCGACGGGCGGCGAGCGGCGGCCGCGCGCCGCGCCGACTCTCGACTCTCGACTCCCGACT
CCCGACGGCCCGCGCCGACC

Product: peptidase

Products: NA

Alternate protein names: Peptidase; Integral Membrane Protein; Rhomboid-Like Protein; Transmembrane Rhomboid Family Protein; Serine Protease; Cytoplasmic Membrane Protein

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MGRAGTDGAARCAHNDRRRLTLSPVAAMTLAIVVLNVIGFFVELAAPERVLSLFALWPPRAGAGLPPAAAPAFHVWQLVT
YSALHAGLSHLLFNMLGLVMFGRDVERALGRARFGALYLASVVCGALTQLALARYSAAAAAPTIGASAGVFGVLAAYALL
YPSRRVVLLIPPIPMRAWVFALLYAGGELLLGVAGAASGIAHFAHLGGMFGAIALMLAWGRPRSEWPVQ

Sequences:

>Translated_229_residues
MGRAGTDGAARCAHNDRRRLTLSPVAAMTLAIVVLNVIGFFVELAAPERVLSLFALWPPRAGAGLPPAAAPAFHVWQLVT
YSALHAGLSHLLFNMLGLVMFGRDVERALGRARFGALYLASVVCGALTQLALARYSAAAAAPTIGASAGVFGVLAAYALL
YPSRRVVLLIPPIPMRAWVFALLYAGGELLLGVAGAASGIAHFAHLGGMFGAIALMLAWGRPRSEWPVQ
>Mature_228_residues
GRAGTDGAARCAHNDRRRLTLSPVAAMTLAIVVLNVIGFFVELAAPERVLSLFALWPPRAGAGLPPAAAPAFHVWQLVTY
SALHAGLSHLLFNMLGLVMFGRDVERALGRARFGALYLASVVCGALTQLALARYSAAAAAPTIGASAGVFGVLAAYALLY
PSRRVVLLIPPIPMRAWVFALLYAGGELLLGVAGAASGIAHFAHLGGMFGAIALMLAWGRPRSEWPVQ

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6321538, Length=134, Percent_Identity=36.5671641791045, Blast_Score=66, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23980; Mature: 23849

Theoretical pI: Translated: 11.06; Mature: 11.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRAGTDGAARCAHNDRRRLTLSPVAAMTLAIVVLNVIGFFVELAAPERVLSLFALWPPR
CCCCCCCHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
AGAGLPPAAAPAFHVWQLVTYSALHAGLSHLLFNMLGLVMFGRDVERALGRARFGALYLA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
SVVCGALTQLALARYSAAAAAPTIGASAGVFGVLAAYALLYPSRRVVLLIPPIPMRAWVF
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHH
ALLYAGGELLLGVAGAASGIAHFAHLGGMFGAIALMLAWGRPRSEWPVQ
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
GRAGTDGAARCAHNDRRRLTLSPVAAMTLAIVVLNVIGFFVELAAPERVLSLFALWPPR
CCCCCCHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
AGAGLPPAAAPAFHVWQLVTYSALHAGLSHLLFNMLGLVMFGRDVERALGRARFGALYLA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
SVVCGALTQLALARYSAAAAAPTIGASAGVFGVLAAYALLYPSRRVVLLIPPIPMRAWVF
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHH
ALLYAGGELLLGVAGAASGIAHFAHLGGMFGAIALMLAWGRPRSEWPVQ
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA