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The map label for this gene is arcD [H]

Identifier: 76819167

GI number: 76819167

Start: 95034

End: 97049

Strand: Direct

Name: arcD [H]

Synonym: BURPS1710b_A0072

Alternate gene names: 76819167

Gene position: 95034-97049 (Clockwise)

Preceding gene: 76818031

Following gene: 76818451

Centisome position: 2.99

GC content: 69.79

Gene sequence:

>2016_bases
ATGGCCGGGCCATTATCGGCAAGACATCGGCGGCGCGCAAGCCGACATGCCGATCGTTCGATCGCGGCGCGGCGGCCCGG
CGATGCGGCGGCCGGCGCGCATAAGCGGGCGCTTTCGGCGGGTTTCGGCGCGCGCGACTGCAGCGATCGGATCGCGGCAA
TTGCGGCAATTGCGCGCAGCGCGCGGCGCGCGGCGGCCCGCGCGGGCGCGTTCACGCCGGGCGGGCACGCTTCATCTGCG
TCGCGCCGCGGCGAGCGCGCCCGCGCGCCTGCGCGCCGCGGCCGACCGGCGACGCCCCGCTTCGTCACCCGCTTCGTCGC
CCGCTTTTCGACCCGCAAGCAACCGCTTTCGGCTCGCCGCACATGCCTCGTCGACACCGCATTCACGCCACATTCACGCC
ACATTCACGCCGCATTCACGCCGCATTCACGCCGAAACGCGCCCCGCGCGCCGCTGATCCAGGTCAATCCGGCCTGCCGG
GCCCGGTGTCTTAATACATTCAACATTCGTCGTGGAGGTTTCATCATGAAGCATTCCGTCAGGCATCCTTTCCACCCGTC
GACACCGCTGCCCGCGCGCGCCTCCGCGCCGCTGCGGGCGGCCGCGCCGCGCCAGTTGCCGTTTGCGCTGCTCACGGCGC
TCGTGATCGGCTCGATGATCGGCAGCGGCATCTTCTCGCTGCCGCAGAACATGGCATCCGGTGCGGGCGCCGGCGCGATC
GTGATCGGCTGGGCGATCACGGGCGTCGGCATGCTGATGCTCGCACTCGTCTACCAGACGCTCGCGCATCGCAAGCCCGA
GCTCGACAACGGCGTCTACGCGTACGCGCACGCGAGCGCCGGCGACTTCGTCGGCTTCAACTCCGCATGGGGCTACTGGG
TCAGCGCGTGGATCGGCAACGTCGGCTATTTGGTGATCGTGTTCGGCACGCTCGGCTACGCGTTTCCGGCGTTCGGCGAC
GGCAACACGCGCGCCGCGGTGATCGGCGCGTCGATCGTGCTGTGGATCATGCACGCGGTGATCCTGCGCGGCGTGCGCGG
CGCGGCGATCCTCAACGCGCTGACGACGATCGCGAAGATCGTGCCGCTCGTGCTGTTCGTCGCGCTCGCCGCGCTCGCGT
TCCAGCCGCACCGCTTCACGACCGACTTCTGGGGCAACGTCCACCTGCCCGGCGTGCTCGACCAGGTGAAGAGCACGATG
CTGATCACCGTCTGGGTGTTCATCGGCATCGAGGGCGCGAGCGTCTATTCGGCCCGCGCGAAGAACCGCGACGACGTCGG
CCGCGCGACCATCGTGGGCTTCGTCGTCGTGCTGCTGTTGCTGATGGCCGTCTCGCTGCTCTCGCTCGGGATCGTGTCGC
AGCCCGAGCTCGCGGCGATGAAGAATCCGTCGATGGCGGGCGTGCTCGAAAAGGCGATCGGCCGCACGGGCGTCGCGATC
GCGGGCGTCGGGCTGCTGGTGTCGGTGGGCGGCGCGCTGCTCGCATGGACGCTGCTCGCCGCCGAGGCGATGTTCACGCC
GGCCAAGGACGGCGTGATGCCGGCGTTCCTGTCGCGCGAGAACGCGCACGGCGTGCCCGCCAACGCGCTGTGGGCGACCA
ACGGCCTCGTGCAGCTGTTCCTGCTCGTCACGCTCGTGTCGAACGCGACGTATCAGGCGCTGATCTCGCTCGCGACGTCG
ATGATCCTCGTGCCGTACCTGTTCTCCGCCGTCTATGCGCTCGTCATCGCGATCAAGGGCGAAGGCTATGCGCCCGGCGA
GGCGGTGCGCGTGCGCGACGCGACGATCGGTGCGGTCGCGACCGTCTACTGCTGCTGGCTGCTGTATGCGGCGGGCCCGA
AATACCTGCTGCTGAGCGCCCTCCTCTATGCGCCGGGCGCGCTGCTGTACGCATGGGCGAAGCGCGAGCGCGGCGAGCGG
CCGTTCAAGCCGTTCGAAGCGGCGATCCTGATCGCGCTCGTCGCGTTCGCGTCGCTCGCGGGCTGGCTCGTCGCGGCGGG
CCGGATCAGCCTGTAA

Upstream 100 bases:

>100_bases
CGACTCATCGCGGACCTCATTCCTACGCCGGCATTACCCGGATCAGGTTTAGGGGTCGTTCCGCGCGCGGAACCTCTCAG
CCGATCGTCGGCTCCCCCTG

Downstream 100 bases:

>100_bases
CGGATTCGGGCGAACCGCCGGGCCGCTCGGCCGCCGCGCGGGCGCGTGTTCCGCGTGGCGGCCTGCGCCGTGTCGGCCGC
GGCGGCCGTGCGGAGCGGGC

Product: amino acid permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 671; Mature: 670

Protein sequence:

>671_residues
MAGPLSARHRRRASRHADRSIAARRPGDAAAGAHKRALSAGFGARDCSDRIAAIAAIARSARRAAARAGAFTPGGHASSA
SRRGERARAPARRGRPATPRFVTRFVARFSTRKQPLSARRTCLVDTAFTPHSRHIHAAFTPHSRRNAPRAPLIQVNPACR
ARCLNTFNIRRGGFIMKHSVRHPFHPSTPLPARASAPLRAAAPRQLPFALLTALVIGSMIGSGIFSLPQNMASGAGAGAI
VIGWAITGVGMLMLALVYQTLAHRKPELDNGVYAYAHASAGDFVGFNSAWGYWVSAWIGNVGYLVIVFGTLGYAFPAFGD
GNTRAAVIGASIVLWIMHAVILRGVRGAAILNALTTIAKIVPLVLFVALAALAFQPHRFTTDFWGNVHLPGVLDQVKSTM
LITVWVFIGIEGASVYSARAKNRDDVGRATIVGFVVVLLLLMAVSLLSLGIVSQPELAAMKNPSMAGVLEKAIGRTGVAI
AGVGLLVSVGGALLAWTLLAAEAMFTPAKDGVMPAFLSRENAHGVPANALWATNGLVQLFLLVTLVSNATYQALISLATS
MILVPYLFSAVYALVIAIKGEGYAPGEAVRVRDATIGAVATVYCCWLLYAAGPKYLLLSALLYAPGALLYAWAKRERGER
PFKPFEAAILIALVAFASLAGWLVAAGRISL

Sequences:

>Translated_671_residues
MAGPLSARHRRRASRHADRSIAARRPGDAAAGAHKRALSAGFGARDCSDRIAAIAAIARSARRAAARAGAFTPGGHASSA
SRRGERARAPARRGRPATPRFVTRFVARFSTRKQPLSARRTCLVDTAFTPHSRHIHAAFTPHSRRNAPRAPLIQVNPACR
ARCLNTFNIRRGGFIMKHSVRHPFHPSTPLPARASAPLRAAAPRQLPFALLTALVIGSMIGSGIFSLPQNMASGAGAGAI
VIGWAITGVGMLMLALVYQTLAHRKPELDNGVYAYAHASAGDFVGFNSAWGYWVSAWIGNVGYLVIVFGTLGYAFPAFGD
GNTRAAVIGASIVLWIMHAVILRGVRGAAILNALTTIAKIVPLVLFVALAALAFQPHRFTTDFWGNVHLPGVLDQVKSTM
LITVWVFIGIEGASVYSARAKNRDDVGRATIVGFVVVLLLLMAVSLLSLGIVSQPELAAMKNPSMAGVLEKAIGRTGVAI
AGVGLLVSVGGALLAWTLLAAEAMFTPAKDGVMPAFLSRENAHGVPANALWATNGLVQLFLLVTLVSNATYQALISLATS
MILVPYLFSAVYALVIAIKGEGYAPGEAVRVRDATIGAVATVYCCWLLYAAGPKYLLLSALLYAPGALLYAWAKRERGER
PFKPFEAAILIALVAFASLAGWLVAAGRISL
>Mature_670_residues
AGPLSARHRRRASRHADRSIAARRPGDAAAGAHKRALSAGFGARDCSDRIAAIAAIARSARRAAARAGAFTPGGHASSAS
RRGERARAPARRGRPATPRFVTRFVARFSTRKQPLSARRTCLVDTAFTPHSRHIHAAFTPHSRRNAPRAPLIQVNPACRA
RCLNTFNIRRGGFIMKHSVRHPFHPSTPLPARASAPLRAAAPRQLPFALLTALVIGSMIGSGIFSLPQNMASGAGAGAIV
IGWAITGVGMLMLALVYQTLAHRKPELDNGVYAYAHASAGDFVGFNSAWGYWVSAWIGNVGYLVIVFGTLGYAFPAFGDG
NTRAAVIGASIVLWIMHAVILRGVRGAAILNALTTIAKIVPLVLFVALAALAFQPHRFTTDFWGNVHLPGVLDQVKSTML
ITVWVFIGIEGASVYSARAKNRDDVGRATIVGFVVVLLLLMAVSLLSLGIVSQPELAAMKNPSMAGVLEKAIGRTGVAIA
GVGLLVSVGGALLAWTLLAAEAMFTPAKDGVMPAFLSRENAHGVPANALWATNGLVQLFLLVTLVSNATYQALISLATSM
ILVPYLFSAVYALVIAIKGEGYAPGEAVRVRDATIGAVATVYCCWLLYAAGPKYLLLSALLYAPGALLYAWAKRERGERP
FKPFEAAILIALVAFASLAGWLVAAGRISL

Specific function: Catalyzes an electroneutral exchange between arginine and ornithine to allow high-efficiency energy conversion in the arginine deiminase pathway [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787890, Length=467, Percent_Identity=44.9678800856531, Blast_Score=380, Evalue=1e-106,
Organism=Escherichia coli, GI2367353, Length=446, Percent_Identity=30.4932735426009, Blast_Score=159, Evalue=5e-40,
Organism=Escherichia coli, GI1786908, Length=444, Percent_Identity=26.3513513513513, Blast_Score=99, Evalue=1e-21,
Organism=Escherichia coli, GI1790575, Length=371, Percent_Identity=26.1455525606469, Blast_Score=80, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293
- InterPro:   IPR004754
- InterPro:   IPR022461 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 70998; Mature: 70867

Theoretical pI: Translated: 11.77; Mature: 11.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGPLSARHRRRASRHADRSIAARRPGDAAAGAHKRALSAGFGARDCSDRIAAIAAIARS
CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
ARRAAARAGAFTPGGHASSASRRGERARAPARRGRPATPRFVTRFVARFSTRKQPLSARR
HHHHHHHCCCCCCCCCCCCHHHCCHHHCCCHHCCCCCCHHHHHHHHHHHHCCCCCHHHHH
TCLVDTAFTPHSRHIHAAFTPHSRRNAPRAPLIQVNPACRARCLNTFNIRRGGFIMKHSV
EEEEECCCCCCCCEEEEEECCCCCCCCCCCCEEEECHHHHHHHHHHCCCCCCCEEEECCC
RHPFHPSTPLPARASAPLRAAAPRQLPFALLTALVIGSMIGSGIFSLPQNMASGAGAGAI
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
VIGWAITGVGMLMLALVYQTLAHRKPELDNGVYAYAHASAGDFVGFNSAWGYWVSAWIGN
EHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCC
VGYLVIVFGTLGYAFPAFGDGNTRAAVIGASIVLWIMHAVILRGVRGAAILNALTTIAKI
CCEEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
VPLVLFVALAALAFQPHRFTTDFWGNVHLPGVLDQVKSTMLITVWVFIGIEGASVYSARA
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHC
KNRDDVGRATIVGFVVVLLLLMAVSLLSLGIVSQPELAAMKNPSMAGVLEKAIGRTGVAI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHCCCCHHH
AGVGLLVSVGGALLAWTLLAAEAMFTPAKDGVMPAFLSRENAHGVPANALWATNGLVQLF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHH
LLVTLVSNATYQALISLATSMILVPYLFSAVYALVIAIKGEGYAPGEAVRVRDATIGAVA
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEEHHHHHHHH
TVYCCWLLYAAGPKYLLLSALLYAPGALLYAWAKRERGERPFKPFEAAILIALVAFASLA
HHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
GWLVAAGRISL
HHHHHCCCCCC
>Mature Secondary Structure 
AGPLSARHRRRASRHADRSIAARRPGDAAAGAHKRALSAGFGARDCSDRIAAIAAIARS
CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
ARRAAARAGAFTPGGHASSASRRGERARAPARRGRPATPRFVTRFVARFSTRKQPLSARR
HHHHHHHCCCCCCCCCCCCHHHCCHHHCCCHHCCCCCCHHHHHHHHHHHHCCCCCHHHHH
TCLVDTAFTPHSRHIHAAFTPHSRRNAPRAPLIQVNPACRARCLNTFNIRRGGFIMKHSV
EEEEECCCCCCCCEEEEEECCCCCCCCCCCCEEEECHHHHHHHHHHCCCCCCCEEEECCC
RHPFHPSTPLPARASAPLRAAAPRQLPFALLTALVIGSMIGSGIFSLPQNMASGAGAGAI
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
VIGWAITGVGMLMLALVYQTLAHRKPELDNGVYAYAHASAGDFVGFNSAWGYWVSAWIGN
EHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCC
VGYLVIVFGTLGYAFPAFGDGNTRAAVIGASIVLWIMHAVILRGVRGAAILNALTTIAKI
CCEEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
VPLVLFVALAALAFQPHRFTTDFWGNVHLPGVLDQVKSTMLITVWVFIGIEGASVYSARA
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHC
KNRDDVGRATIVGFVVVLLLLMAVSLLSLGIVSQPELAAMKNPSMAGVLEKAIGRTGVAI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHCCCCHHH
AGVGLLVSVGGALLAWTLLAAEAMFTPAKDGVMPAFLSRENAHGVPANALWATNGLVQLF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHH
LLVTLVSNATYQALISLATSMILVPYLFSAVYALVIAIKGEGYAPGEAVRVRDATIGAVA
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEEHHHHHHHH
TVYCCWLLYAAGPKYLLLSALLYAPGALLYAWAKRERGERPFKPFEAAILIALVAFASLA
HHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
GWLVAAGRISL
HHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2158926; 10984043; 1311296 [H]