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The map label for this gene is tdcF [C]

Identifier: 76818375

GI number: 76818375

Start: 1633503

End: 1633895

Strand: Direct

Name: tdcF [C]

Synonym: BURPS1710b_A1322

Alternate gene names: 76818375

Gene position: 1633503-1633895 (Clockwise)

Preceding gene: 162210117

Following gene: 76818404

Centisome position: 51.34

GC content: 72.77

Gene sequence:

>393_bases
ATGCCAGAACTGATCCCCGTCGATCTTCCCGAACCCGCGCAGCCGTTCTCATGGGCCACGCACGCGCACGGCCTGATGTT
CACCGCGCACGGCCCCGTCGATGCGGCGGGCGCGATCGCGGGCGGCGACATCGCGCAGCAGGCGCGTCTCACGCTGTCGA
ACCTCGCCGCGGCCGTGCGCGCCGCCGGCGCGCACCTGCGCGACGTCGCGCAGGTGCTGCTGTACGTCGCCGATGCGCGC
GACATCCCGACCATCGACGCCGTGTACCGCGAGTTCTTCGCCGCACCCTACCCGAACCGCGCATGCGTTGCCGTGCGGGG
CTTCGCGCATCCGGACATGCGCATCGAGCTCGTCGCGCACGTCGCGCTCGGCCGCGCGGCTCCAGCCGGCTAG

Upstream 100 bases:

>100_bases
CGCCGACCGGAATCCGCGCCGGCTAAAGCCGGCTTCGCGGGCGCCGCCGCACGCTCGCCCGCCCCGCTTCAATCATCAGA
TATCCGAACGAGCTTTCCTC

Downstream 100 bases:

>100_bases
CGCCGCATTCGAACCACGCCTCGCCGCCGGCCCGAGAAGCCGGCGGCCGCGCGCGCGGCGCGTCGCGACACGGACGGCGG
CGGCCCGCCCGCCTCGCCCG

Product: translation initiation inhibitor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MPELIPVDLPEPAQPFSWATHAHGLMFTAHGPVDAAGAIAGGDIAQQARLTLSNLAAAVRAAGAHLRDVAQVLLYVADAR
DIPTIDAVYREFFAAPYPNRACVAVRGFAHPDMRIELVAHVALGRAAPAG

Sequences:

>Translated_130_residues
MPELIPVDLPEPAQPFSWATHAHGLMFTAHGPVDAAGAIAGGDIAQQARLTLSNLAAAVRAAGAHLRDVAQVLLYVADAR
DIPTIDAVYREFFAAPYPNRACVAVRGFAHPDMRIELVAHVALGRAAPAG
>Mature_129_residues
PELIPVDLPEPAQPFSWATHAHGLMFTAHGPVDAAGAIAGGDIAQQARLTLSNLAAAVRAAGAHLRDVAQVLLYVADARD
IPTIDAVYREFFAAPYPNRACVAVRGFAHPDMRIELVAHVALGRAAPAG

Specific function: Anaerobic degradation of L-threonine to propionate. [C]

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR006056
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 13640; Mature: 13509

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPELIPVDLPEPAQPFSWATHAHGLMFTAHGPVDAAGAIAGGDIAQQARLTLSNLAAAVR
CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
AAGAHLRDVAQVLLYVADARDIPTIDAVYREFFAAPYPNRACVAVRGFAHPDMRIELVAH
HHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHH
VALGRAAPAG
HHHCCCCCCC
>Mature Secondary Structure 
PELIPVDLPEPAQPFSWATHAHGLMFTAHGPVDAAGAIAGGDIAQQARLTLSNLAAAVR
CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
AAGAHLRDVAQVLLYVADARDIPTIDAVYREFFAAPYPNRACVAVRGFAHPDMRIELVAH
HHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHH
VALGRAAPAG
HHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]