Click here to switch to the map view.

The map label for this gene is 76818404

Identifier: 76818404

GI number: 76818404

Start: 1634063

End: 1635136

Strand: Direct

Name: 76818404

Synonym: BURPS1710b_A1323

Alternate gene names: NA

Gene position: 1634063-1635136 (Clockwise)

Preceding gene: 76818375

Following gene: 76818902

Centisome position: 51.36

GC content: 69.93

Gene sequence:

>1074_bases
ATGAACAGGTTGGGAGCAACGACATGGCCGATCGCGATCGGCCTCGCGCTAGCGGGCCCGGCGTTCGCGCAAAGCTCGGT
CGCGCTGTACGGCATCGTCGATCAGAGCGTGCGCTACACGACGCACGCGAGCGCCGCGAACGACAGCGCCGTGCAGATGG
CGAACGGCGCGATCACGAACAGCCGCTGGGGCATGAAGGGCGCCGAGGATCTCGGCGACGGCCTGAAGGCGATCTTCCGC
CTCGAGAACGGCTTCGAGCCGCAGTCGGGCCAGGCCGACGGCGCCCGCCTGTTCGGCCGCTACGCATATGTCGGCCTGTC
GGGCCGCCTCGGCACGGTGGAACTCGGCCGCCAGACGACCGAGGGCTTCAACCTGTTCGGCGATCTCGATCCGCTGACGA
TCGGCAACTACACGGCGAACATGTGGCCGTACTTCCTCACGCAGGGCTACGCGAACAACGTCGTCAGCTATGCGAACACG
CTCGGCGGCCTCGCGGTGGGCGCGAGCTACGGCTTGGGCGGCGTCGCGGGCGCGATGAGCCGCAACGCCTACTGGGGCGT
GCGCTCCGCGTACACGCACGGCGCGCTCACGGTCGGCGCCGTCTATCAGCAAACGCGCGACGCAGACGGCCGCGCGCAGC
AGATGTGGGGGGCGGCGGGCCGCTACGCCGTCGGCCCCGCGACGCTGTTCGCCGGCTATCTCGGCGGCAAGGACGCGACG
GGCGCGATCGATCGCGACTATCTGAACGCCCCCGGCCGCACCGTCGCGTACGGCTCGTTCGCCGATCATCCGCGCTACGA
CGCGATCGGCTACGCGGGCGTCGCATACCGTGTCGACCCGGCGCTCATGCTGACGGGCGCGTTCTATTACGATGCGATCC
GCAACGTGAACGGCGTCGGCGGCAACGGCGGCAAGCGCCGCGCGGGCGTGCTCGAAGCGGAGTATGCGCTGTCGAAGGCC
ACGCAGCTGTATGCGAGCGCCGACTATAACCAGGTCTGCGGCGGCGCCGCCACCGAGATGCCCGGCCGGGGCAACCAGAC
GGGCGTCGCGCTCGGCCTGCGGCACATGTTCTGA

Upstream 100 bases:

>100_bases
ACACGGACGGCGGCGGCCCGCCCGCCTCGCCCGCGGCCTCGCCCGCGCGGCGAGGGCTTCATGCCGTCCGCCACAACGAC
ACTTCGACAAGGAAACGAAG

Downstream 100 bases:

>100_bases
CGAAACGGATCGTTCACGACGATCGCGCGGGCGCCACGGCGCGCCCGCGATCCAATCAAGACAATCGGAGGAGCATCCAA
TGAGTTCGGAACGGCAATTT

Product: outer membrane porin protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MNRLGATTWPIAIGLALAGPAFAQSSVALYGIVDQSVRYTTHASAANDSAVQMANGAITNSRWGMKGAEDLGDGLKAIFR
LENGFEPQSGQADGARLFGRYAYVGLSGRLGTVELGRQTTEGFNLFGDLDPLTIGNYTANMWPYFLTQGYANNVVSYANT
LGGLAVGASYGLGGVAGAMSRNAYWGVRSAYTHGALTVGAVYQQTRDADGRAQQMWGAAGRYAVGPATLFAGYLGGKDAT
GAIDRDYLNAPGRTVAYGSFADHPRYDAIGYAGVAYRVDPALMLTGAFYYDAIRNVNGVGGNGGKRRAGVLEAEYALSKA
TQLYASADYNQVCGGAATEMPGRGNQTGVALGLRHMF

Sequences:

>Translated_357_residues
MNRLGATTWPIAIGLALAGPAFAQSSVALYGIVDQSVRYTTHASAANDSAVQMANGAITNSRWGMKGAEDLGDGLKAIFR
LENGFEPQSGQADGARLFGRYAYVGLSGRLGTVELGRQTTEGFNLFGDLDPLTIGNYTANMWPYFLTQGYANNVVSYANT
LGGLAVGASYGLGGVAGAMSRNAYWGVRSAYTHGALTVGAVYQQTRDADGRAQQMWGAAGRYAVGPATLFAGYLGGKDAT
GAIDRDYLNAPGRTVAYGSFADHPRYDAIGYAGVAYRVDPALMLTGAFYYDAIRNVNGVGGNGGKRRAGVLEAEYALSKA
TQLYASADYNQVCGGAATEMPGRGNQTGVALGLRHMF
>Mature_357_residues
MNRLGATTWPIAIGLALAGPAFAQSSVALYGIVDQSVRYTTHASAANDSAVQMANGAITNSRWGMKGAEDLGDGLKAIFR
LENGFEPQSGQADGARLFGRYAYVGLSGRLGTVELGRQTTEGFNLFGDLDPLTIGNYTANMWPYFLTQGYANNVVSYANT
LGGLAVGASYGLGGVAGAMSRNAYWGVRSAYTHGALTVGAVYQQTRDADGRAQQMWGAAGRYAVGPATLFAGYLGGKDAT
GAIDRDYLNAPGRTVAYGSFADHPRYDAIGYAGVAYRVDPALMLTGAFYYDAIRNVNGVGGNGGKRRAGVLEAEYALSKA
TQLYASADYNQVCGGAATEMPGRGNQTGVALGLRHMF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 37389; Mature: 37389

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLGATTWPIAIGLALAGPAFAQSSVALYGIVDQSVRYTTHASAANDSAVQMANGAITN
CCCCCCCHHHHHHHHHHCCCHHHCCCEEEEEEECCCEEEEECCCCCCCCHHHHCCCCEEC
SRWGMKGAEDLGDGLKAIFRLENGFEPQSGQADGARLFGRYAYVGLSGRLGTVELGRQTT
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHEEEEEEECCCCCEEECCCCCC
EGFNLFGDLDPLTIGNYTANMWPYFLTQGYANNVVSYANTLGGLAVGASYGLGGVAGAMS
CCCCEECCCCCEEECCCCCCCCHHHHHCCHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHC
RNAYWGVRSAYTHGALTVGAVYQQTRDADGRAQQMWGAAGRYAVGPATLFAGYLGGKDAT
CCCCCCHHHHHCCCCEEHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCCCCC
GAIDRDYLNAPGRTVAYGSFADHPRYDAIGYAGVAYRVDPALMLTGAFYYDAIRNVNGVG
CCCCHHHHCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCHHEEHHHHHHHHHHCCCCCC
GNGGKRRAGVLEAEYALSKATQLYASADYNQVCGGAATEMPGRGNQTGVALGLRHMF
CCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MNRLGATTWPIAIGLALAGPAFAQSSVALYGIVDQSVRYTTHASAANDSAVQMANGAITN
CCCCCCCHHHHHHHHHHCCCHHHCCCEEEEEEECCCEEEEECCCCCCCCHHHHCCCCEEC
SRWGMKGAEDLGDGLKAIFRLENGFEPQSGQADGARLFGRYAYVGLSGRLGTVELGRQTT
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHEEEEEEECCCCCEEECCCCCC
EGFNLFGDLDPLTIGNYTANMWPYFLTQGYANNVVSYANTLGGLAVGASYGLGGVAGAMS
CCCCEECCCCCEEECCCCCCCCHHHHHCCHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHC
RNAYWGVRSAYTHGALTVGAVYQQTRDADGRAQQMWGAAGRYAVGPATLFAGYLGGKDAT
CCCCCCHHHHHCCCCEEHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHHHCCCCCCC
GAIDRDYLNAPGRTVAYGSFADHPRYDAIGYAGVAYRVDPALMLTGAFYYDAIRNVNGVG
CCCCHHHHCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCHHEEHHHHHHHHHHCCCCCC
GNGGKRRAGVLEAEYALSKATQLYASADYNQVCGGAATEMPGRGNQTGVALGLRHMF
CCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]