Click here to switch to the map view.

The map label for this gene is F17a-A [H]

Identifier: 76818341

GI number: 76818341

Start: 1952842

End: 1953405

Strand: Direct

Name: F17a-A [H]

Synonym: BURPS1710b_A1602

Alternate gene names: 76818341

Gene position: 1952842-1953405 (Clockwise)

Preceding gene: 76818889

Following gene: 76817325

Centisome position: 61.38

GC content: 62.77

Gene sequence:

>564_bases
ATGAATGGGCTGAAATTCAGGAGAGGCGCGGCGCGCCGATGGCCGTCGATCGCCGCTGCCGCAATGTTCGCGGCTTCGGC
GGCCTGCGGCGCGCCGCCGTCGCCGACCGTGACGATCAAATTCAAGGGAAGCTACAACCCGGTGACTTGCACGGTCGTGG
AGGGCAACGAGAACAAAACGGTTCACCTGCCGACGATTTCGACGTCGTCACTGGCGAATGCGGGGGAAACCGCCGGCGCG
ACCGGGTTCGACATTTCCGTGCTTTGCGACGGATACGCGGGAAACGTGCTGGCCTATTTCGAGAACGGACCGACGACCAA
CGAGAACGGCAATCTCGACGTCGAGGACCCGAGCGACGGACAGAGCGCCTCCGGCGTGCAGGTCCAGCTCCTGAACGGTG
ACGGCTCGCCTATCAAGGTCGGCGACATATCGACGATGAAGACGGTGTCCGTCGAAGCGTCGACGCCTACGCCGATTCCC
TTCTTCGCGCGCTACTACGCCACCGGGAAGTCCGGTGCGGGCAAGGTGCGAACCTATGTGACCTTCGTGATCCAGATGCT
TTGA

Upstream 100 bases:

>100_bases
TCACGGGCGATCGTTCGCATCCGCTTGCGTTGCGAGCCGCGATTGAGCGCCGACGCGAGCCAGACGCCGGACGGCGATGG
CGGAACACGGAATGATTGAG

Downstream 100 bases:

>100_bases
GCATTCGGGATCCGCTTCCTCGAGTCGAGACATGTCGATTGAAATGCCCGCGCAGCCGCTGCGCATGTTATTGCAGGACA
CGATGCTCCATGTCGCGCTA

Product: major fimbrial subunit protein

Products: NA

Alternate protein names: F17 fimbrial adhesive antigen; F17 pilin [H]

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MNGLKFRRGAARRWPSIAAAAMFAASAACGAPPSPTVTIKFKGSYNPVTCTVVEGNENKTVHLPTISTSSLANAGETAGA
TGFDISVLCDGYAGNVLAYFENGPTTNENGNLDVEDPSDGQSASGVQVQLLNGDGSPIKVGDISTMKTVSVEASTPTPIP
FFARYYATGKSGAGKVRTYVTFVIQML

Sequences:

>Translated_187_residues
MNGLKFRRGAARRWPSIAAAAMFAASAACGAPPSPTVTIKFKGSYNPVTCTVVEGNENKTVHLPTISTSSLANAGETAGA
TGFDISVLCDGYAGNVLAYFENGPTTNENGNLDVEDPSDGQSASGVQVQLLNGDGSPIKVGDISTMKTVSVEASTPTPIP
FFARYYATGKSGAGKVRTYVTFVIQML
>Mature_187_residues
MNGLKFRRGAARRWPSIAAAAMFAASAACGAPPSPTVTIKFKGSYNPVTCTVVEGNENKTVHLPTISTSSLANAGETAGA
TGFDISVLCDGYAGNVLAYFENGPTTNENGNLDVEDPSDGQSASGVQVQLLNGDGSPIKVGDISTMKTVSVEASTPTPIP
FFARYYATGKSGAGKVRTYVTFVIQML

Specific function: Fimbriae (also called pili), polar filaments radiating from the surface of the bacterium to a length of 0.5-1.5 micrometers and numbering 100-300 per cell, enable bacteria to colonize the epithelium of specific host organs [H]

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 19365; Mature: 19365

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGLKFRRGAARRWPSIAAAAMFAASAACGAPPSPTVTIKFKGSYNPVTCTVVEGNENKT
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEECCCCCE
VHLPTISTSSLANAGETAGATGFDISVLCDGYAGNVLAYFENGPTTNENGNLDVEDPSDG
EEEECCCCHHCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCEECCCCCCC
QSASGVQVQLLNGDGSPIKVGDISTMKTVSVEASTPTPIPFFARYYATGKSGAGKVRTYV
CCCCCEEEEEECCCCCEEEECCCCEEEEEEEECCCCCCCHHEEEEEECCCCCCCHHHHHH
TFVIQML
HHHHHCC
>Mature Secondary Structure
MNGLKFRRGAARRWPSIAAAAMFAASAACGAPPSPTVTIKFKGSYNPVTCTVVEGNENKT
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEECCCCCE
VHLPTISTSSLANAGETAGATGFDISVLCDGYAGNVLAYFENGPTTNENGNLDVEDPSDG
EEEECCCCHHCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCEECCCCCCC
QSASGVQVQLLNGDGSPIKVGDISTMKTVSVEASTPTPIPFFARYYATGKSGAGKVRTYV
CCCCCEEEEEECCCCCEEEECCCCEEEEEEEECCCCCCCHHEEEEEECCCCCCCHHHHHH
TFVIQML
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2897333 [H]