Click here to switch to the map view.

The map label for this gene is yphA [H]

Identifier: 76818327

GI number: 76818327

Start: 2292658

End: 2293095

Strand: Direct

Name: yphA [H]

Synonym: BURPS1710b_A1877

Alternate gene names: 76818327

Gene position: 2292658-2293095 (Clockwise)

Preceding gene: 76817632

Following gene: 76817590

Centisome position: 72.06

GC content: 67.12

Gene sequence:

>438_bases
ATGACGCGTTCCGTCGATTCCGGCGTCATTTTCTTCGCACGGCTCCTGCTCGCCGTGCTGTTCCTCTGGGGCGGCGCGAT
GAAGCTGATGGGCTATGGCGAGTTCGTCGGGTATCTGAAGGGGCTCGGCGTGCCGTTCACGCAGGTCGCGGCGCCCGTGA
TCGTCGCGCTCGAGGCGATCGGCGGCGTGCTGCTCATCGTCGGCTACCAGGTGAAGCCGCTCGCGCTCGTGCTCGCGCTC
TACACGCTCGCGGCCGCGCTGATCGGACACAATTTCTGGGACGCGACCAGTTCGGCTCTGCAGCGCGACATGGTCGTGCA
TTTCTGGAAGAACGTCGCGATCGCGGGCGGCTTCCTGCTGCTGTACGTGACGGGCGCGGGCGGCGCGAGCATCGACGGCG
CGCGGCGGTCCTCGTCATCCTACGGATCGCTGCGCTGA

Upstream 100 bases:

>100_bases
CTTTTGCTTGGAACGACGGACGAGACCTCCTATTCTGGCGGATTTACGAGATACGCCGCGCACGGCGCGGTGTTCGTCGA
TTGATCAGAGGAGGTCACGC

Downstream 100 bases:

>100_bases
GCGCTTCGCGGCATGCGCGGCGCGCGCGGCGCGCCGCTTGAAGCGCCGGCGGGCGCCGGCCGCGTTCGGCAAGCGCGCGG
CGTACACCGCGTCGATCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MTRSVDSGVIFFARLLLAVLFLWGGAMKLMGYGEFVGYLKGLGVPFTQVAAPVIVALEAIGGVLLIVGYQVKPLALVLAL
YTLAAALIGHNFWDATSSALQRDMVVHFWKNVAIAGGFLLLYVTGAGGASIDGARRSSSSYGSLR

Sequences:

>Translated_145_residues
MTRSVDSGVIFFARLLLAVLFLWGGAMKLMGYGEFVGYLKGLGVPFTQVAAPVIVALEAIGGVLLIVGYQVKPLALVLAL
YTLAAALIGHNFWDATSSALQRDMVVHFWKNVAIAGGFLLLYVTGAGGASIDGARRSSSSYGSLR
>Mature_144_residues
TRSVDSGVIFFARLLLAVLFLWGGAMKLMGYGEFVGYLKGLGVPFTQVAAPVIVALEAIGGVLLIVGYQVKPLALVLALY
TLAAALIGHNFWDATSSALQRDMVVHFWKNVAIAGGFLLLYVTGAGGASIDGARRSSSSYGSLR

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the doxX family [H]

Homologues:

Organism=Escherichia coli, GI145693171, Length=124, Percent_Identity=41.9354838709677, Blast_Score=101, Evalue=2e-23,
Organism=Escherichia coli, GI87082210, Length=133, Percent_Identity=36.8421052631579, Blast_Score=69, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011637 [H]

Pfam domain/function: PF07681 DoxX [H]

EC number: NA

Molecular weight: Translated: 15283; Mature: 15152

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRSVDSGVIFFARLLLAVLFLWGGAMKLMGYGEFVGYLKGLGVPFTQVAAPVIVALEAI
CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
GGVLLIVGYQVKPLALVLALYTLAAALIGHNFWDATSSALQRDMVVHFWKNVAIAGGFLL
CCEEEHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
LYVTGAGGASIDGARRSSSSYGSLR
EEEECCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TRSVDSGVIFFARLLLAVLFLWGGAMKLMGYGEFVGYLKGLGVPFTQVAAPVIVALEAI
CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
GGVLLIVGYQVKPLALVLALYTLAAALIGHNFWDATSSALQRDMVVHFWKNVAIAGGFLL
CCEEEHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
LYVTGAGGASIDGARRSSSSYGSLR
EEEECCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]