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The map label for this gene is ydiK [C]

Identifier: 76818196

GI number: 76818196

Start: 1194543

End: 1195667

Strand: Direct

Name: ydiK [C]

Synonym: BURPS1710b_A0937

Alternate gene names: 76818196

Gene position: 1194543-1195667 (Clockwise)

Preceding gene: 76817247

Following gene: 76819626

Centisome position: 37.54

GC content: 64.62

Gene sequence:

>1125_bases
ATGCGTCACGGCGGGCCGCCGCGGCGCGGCTTGCCCGTCCGATCAACCATCCTCCCCGAGCACACCATGGATAGCGGGAA
CGATCACCAAAAATTCTTCCACCTGTTGCTTCTCGTCGTCACCGTTGGTCTTTGCTGGATATTGACGCCGTTCTTCGGCG
CGATCTTCTGGGGGACCATTCTCGCGATCCTGTTCCAGCCCGTGCAGCGCTGGCTCGCCGCACGCTTCGGCAAGCGCCGC
AATCTCGCCGCGCTCGTCACGCTGTCGCTCATCATCCTGATCGTGATCCTGCCGCTTGCGTTCGTGACCGCGACACTCGT
GCAGGAGATCGCGTACGCGTATCAGCAGATCAAGACGATGCAGCCGAACATGACGCAGTACTTCCAGGAGTTCATGCACG
CGCTGCCGAGCTCCGTGCATCGCGTGCTGCACAATTACGGGCTCACCGACATCGCCGGCATCCAGAAGAAGCTGACCGAC
GGCGCGGCTGCGATCAGCCAGTTCGTGGCCGCGCAGGCGCTCAGCATCGGGCAGAACACGTTCCAGTTCGTCGTGAGCTT
CGGCGTGATGCTGTACCTCGTGTTCTTCCTGTTGCGCGACGGCGGCGAGATCGGCCGCCGCGTGCGGCGCGCGCTGCCGC
TCGACGAAGAGCACAAGCAGCATCTGCTGACGAAGTTCACGACGGTCGTGCGCGCGACCGTCAAGGGCAACATCGCGGTC
GCGGCCGTGCAGGGCGCGCTCGGCGGCCTGATCTTCTGGATTCTCGGGATCGAGGGCGTGATTCTGTGGGGCGCGCTGAT
GGCGTTCCTGTCGCTGCTGCCCGCGATCGGCGCGGGGCTCGTATGGGTGCCGGCCGCCGGCTATTTCGCGGTGACCGGGC
AAATCTGGAAATGCGTGATTCTCGTCGCGTTCTGCGTGGGCGTGATCGGGCTCGTCGATAACCTGCTGCGGCCGATCCTC
GTCGGCAAGGACACGAAGATGCCCGACTGGGTCGTGCTGATCTCGACGCTCGGCGGCATGGCGCTGTTCGGCATCAACGG
CTTCGTGATCGGCCCGCTCGTCGCCGCGCTGTTCATGGCGAGCTGGGACATCTTCGCGCGCACCGAGCAGACCGACTGGG
AATGA

Upstream 100 bases:

>100_bases
CGCGGCAGCTCGCCGCGGCGTTTTCGATCGCAGCCCGAACGACATGCGCTCGGGGCGAGGCAACGCACGCGCGCCGCGCG
CGACGCGTCAGGCATAATCG

Downstream 100 bases:

>100_bases
CGCGCCGCCGGCGCGCGTTCGTCCGGACATCCCATTAAAAAACCCGGCTTTCAAGCCGGTTTTTTTTGCGTTCGGCCCGG
CGCGATCCGCCCGGGCCGGC

Product: PerM family permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MRHGGPPRRGLPVRSTILPEHTMDSGNDHQKFFHLLLLVVTVGLCWILTPFFGAIFWGTILAILFQPVQRWLAARFGKRR
NLAALVTLSLIILIVILPLAFVTATLVQEIAYAYQQIKTMQPNMTQYFQEFMHALPSSVHRVLHNYGLTDIAGIQKKLTD
GAAAISQFVAAQALSIGQNTFQFVVSFGVMLYLVFFLLRDGGEIGRRVRRALPLDEEHKQHLLTKFTTVVRATVKGNIAV
AAVQGALGGLIFWILGIEGVILWGALMAFLSLLPAIGAGLVWVPAAGYFAVTGQIWKCVILVAFCVGVIGLVDNLLRPIL
VGKDTKMPDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIFARTEQTDWE

Sequences:

>Translated_374_residues
MRHGGPPRRGLPVRSTILPEHTMDSGNDHQKFFHLLLLVVTVGLCWILTPFFGAIFWGTILAILFQPVQRWLAARFGKRR
NLAALVTLSLIILIVILPLAFVTATLVQEIAYAYQQIKTMQPNMTQYFQEFMHALPSSVHRVLHNYGLTDIAGIQKKLTD
GAAAISQFVAAQALSIGQNTFQFVVSFGVMLYLVFFLLRDGGEIGRRVRRALPLDEEHKQHLLTKFTTVVRATVKGNIAV
AAVQGALGGLIFWILGIEGVILWGALMAFLSLLPAIGAGLVWVPAAGYFAVTGQIWKCVILVAFCVGVIGLVDNLLRPIL
VGKDTKMPDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIFARTEQTDWE
>Mature_374_residues
MRHGGPPRRGLPVRSTILPEHTMDSGNDHQKFFHLLLLVVTVGLCWILTPFFGAIFWGTILAILFQPVQRWLAARFGKRR
NLAALVTLSLIILIVILPLAFVTATLVQEIAYAYQQIKTMQPNMTQYFQEFMHALPSSVHRVLHNYGLTDIAGIQKKLTD
GAAAISQFVAAQALSIGQNTFQFVVSFGVMLYLVFFLLRDGGEIGRRVRRALPLDEEHKQHLLTKFTTVVRATVKGNIAV
AAVQGALGGLIFWILGIEGVILWGALMAFLSLLPAIGAGLVWVPAAGYFAVTGQIWKCVILVAFCVGVIGLVDNLLRPIL
VGKDTKMPDWVVLISTLGGMALFGINGFVIGPLVAALFMASWDIFARTEQTDWE

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=345, Percent_Identity=28.1159420289855, Blast_Score=88, Evalue=9e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 41108; Mature: 41108

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHGGPPRRGLPVRSTILPEHTMDSGNDHQKFFHLLLLVVTVGLCWILTPFFGAIFWGTI
CCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAILFQPVQRWLAARFGKRRNLAALVTLSLIILIVILPLAFVTATLVQEIAYAYQQIKTM
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QPNMTQYFQEFMHALPSSVHRVLHNYGLTDIAGIQKKLTDGAAAISQFVAAQALSIGQNT
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FQFVVSFGVMLYLVFFLLRDGGEIGRRVRRALPLDEEHKQHLLTKFTTVVRATVKGNIAV
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHH
AAVQGALGGLIFWILGIEGVILWGALMAFLSLLPAIGAGLVWVPAAGYFAVTGQIWKCVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHH
LVAFCVGVIGLVDNLLRPILVGKDTKMPDWVVLISTLGGMALFGINGFVIGPLVAALFMA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
SWDIFARTEQTDWE
HHHHHHCCCCCCCC
>Mature Secondary Structure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HHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]