| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
Click here to switch to the map view.
The map label for this gene is 76817760
Identifier: 76817760
GI number: 76817760
Start: 1598080
End: 1599195
Strand: Direct
Name: 76817760
Synonym: BURPS1710b_A1287
Alternate gene names: NA
Gene position: 1598080-1599195 (Clockwise)
Preceding gene: 76818269
Following gene: 76818917
Centisome position: 50.23
GC content: 63.8
Gene sequence:
>1116_bases ATGCGCCAGCACCTGTCCGGCAACAAACGCTATCCGCTCGCGCTGATGCTCGAGCCCCTCTTCCGCTGCAACCTCGCGTG CAACGGCTGCGGCAAGATCGACTATCCGGATCCGATCCTGAACCAGCGCCTGTCCGTCGAGGAATGCCTGCAGGCCGTCG ACGAGTGCGGCGCGCCCGTGGTGTCGATCGCGGGCGGCGAGCCGCTGCTGCACAAGGAAATGCCGGAAATCGTCAAGGGC ATCATGAAGCGCAAGAAGTTCGTCTACCTGTGCACGAACGCGCTGCTGATGGAAAAGAAGATGGACGATTACGCGCCGAG CCCGTACTTCGTCTGGTCGGTCCATCTCGACGGCGACCGGGAGATGCACGATCACTCGGTGTCGCAGGAAGGCGTGTACG ACAAGGCCGTCGCGGCGATCCGCGAAGCGAAGCGCCGCGGCTTCCGCGTGAACATCAACTGCACGCTGTTCAACGATGCG CTCCCCGAACGCGTCGCGAAGTTCTTCGATACGCTGGGGCCGATCGGCGTCGACGGCATCACCGTGTCGCCGGGCTACGC GTACGAGCGCGCGCCGGATCAGCAGCACTTCCTGAACCGCGACAAGACGAAGAACCTGTTCCGCGAAGTCTTCAAGCGCG GCGAAGGCGGCAAGCGCTGGTCGTTCAGCCAGTCGTCGCTGTTCCTCGATTTCCTCGCCGGCAACCAGACGTACAAGTGC ACGCCGTGGGGCAACCCGGCGCGCACGGTGTTCGGCTGGCAGAAGCCGTGCTACCTGGTCGGCGAAGGCTACGTGAAGAC CTTCAAGGAGCTGATGGAATCGACCGACTGGGACAACTACGGCGTCGGCAACTACGAAAAGTGTGCGGACTGCATGGTCC ACTGCGGCTTCGAGGCCACCGCCGTGATGGATACGATCGCGCATCCGCTGAAGGCGCTGAAGGTGTCGATGAGCGGCATC CGGACCGAAGGCGCGTTCGCGCCGGATATTCCGATCGACAACCAGCGTCCGGCCGAGTATGTGTTCTCGCGCCACGTGGA AATCAAGCTCGAGGAGATCCAGCGCGCGGGCAAGGGCAAGCTGCAGAAGGCGCCGAAGCCCGCCGCGACGGCCTGA
Upstream 100 bases:
>100_bases GCTGCCGGCGAAGCTCACGCAAGCTGTCGCCCGCGAAGTTTAAGGAGGACATCCCTTGTCTATTCCGCTGCTCCAGCAAG TCCGCGTTGGCGCGTACATC
Downstream 100 bases:
>100_bases CGATCGCCGCACGGGACGCGCTCGCGCTTCCCGTCGCCGGCCCGGGCGCCCCGGACGATGTTCGCGGCGCCTTTTTGTTT TTTGCGTGTTTGCGTGGTGC
Product: radical SAM domain-containing protein
Products: NA
Alternate protein names: Radical SAM Domain-Containing Protein; Radical SAM Family Protein; Radical SAM Domain Protein; Molybdenum Cofactor Biosynthesis Protein A; MoaA/NifB/PqqE Family Protein; MoaA NifB PqqE Radical SAM Superfamily Protein; Co PQQ Synthesis Protein E; Co PQQ Synthesis Protein; Radical S-Adenosylmethionine Superfamily Protein; Iron-Sulfur Oxidoreductase; MoaA/NifB/PqqE Family Fe-S Oxidoreductase; Radical SAM Oxidoreductase; Heme D1 Biosynthesis Protein NirJ; Heme D1 Biosynthesis Protein; Hopanoid Biosynthesis Associated Radical SAM Protein; Fe-S Oxidoreductase; Radical SAM Protein; Radical SAM Superfamily; Radical SAM; Radical SAM Family Fe-S Protein
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MRQHLSGNKRYPLALMLEPLFRCNLACNGCGKIDYPDPILNQRLSVEECLQAVDECGAPVVSIAGGEPLLHKEMPEIVKG IMKRKKFVYLCTNALLMEKKMDDYAPSPYFVWSVHLDGDREMHDHSVSQEGVYDKAVAAIREAKRRGFRVNINCTLFNDA LPERVAKFFDTLGPIGVDGITVSPGYAYERAPDQQHFLNRDKTKNLFREVFKRGEGGKRWSFSQSSLFLDFLAGNQTYKC TPWGNPARTVFGWQKPCYLVGEGYVKTFKELMESTDWDNYGVGNYEKCADCMVHCGFEATAVMDTIAHPLKALKVSMSGI RTEGAFAPDIPIDNQRPAEYVFSRHVEIKLEEIQRAGKGKLQKAPKPAATA
Sequences:
>Translated_371_residues MRQHLSGNKRYPLALMLEPLFRCNLACNGCGKIDYPDPILNQRLSVEECLQAVDECGAPVVSIAGGEPLLHKEMPEIVKG IMKRKKFVYLCTNALLMEKKMDDYAPSPYFVWSVHLDGDREMHDHSVSQEGVYDKAVAAIREAKRRGFRVNINCTLFNDA LPERVAKFFDTLGPIGVDGITVSPGYAYERAPDQQHFLNRDKTKNLFREVFKRGEGGKRWSFSQSSLFLDFLAGNQTYKC TPWGNPARTVFGWQKPCYLVGEGYVKTFKELMESTDWDNYGVGNYEKCADCMVHCGFEATAVMDTIAHPLKALKVSMSGI RTEGAFAPDIPIDNQRPAEYVFSRHVEIKLEEIQRAGKGKLQKAPKPAATA >Mature_371_residues MRQHLSGNKRYPLALMLEPLFRCNLACNGCGKIDYPDPILNQRLSVEECLQAVDECGAPVVSIAGGEPLLHKEMPEIVKG IMKRKKFVYLCTNALLMEKKMDDYAPSPYFVWSVHLDGDREMHDHSVSQEGVYDKAVAAIREAKRRGFRVNINCTLFNDA LPERVAKFFDTLGPIGVDGITVSPGYAYERAPDQQHFLNRDKTKNLFREVFKRGEGGKRWSFSQSSLFLDFLAGNQTYKC TPWGNPARTVFGWQKPCYLVGEGYVKTFKELMESTDWDNYGVGNYEKCADCMVHCGFEATAVMDTIAHPLKALKVSMSGI RTEGAFAPDIPIDNQRPAEYVFSRHVEIKLEEIQRAGKGKLQKAPKPAATA
Specific function: Unknown
COG id: COG0535
COG function: function code R; Predicted Fe-S oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41750; Mature: 41750
Theoretical pI: Translated: 8.01; Mature: 8.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQHLSGNKRYPLALMLEPLFRCNLACNGCGKIDYPDPILNQRLSVEECLQAVDECGAPV CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCE VSIAGGEPLLHKEMPEIVKGIMKRKKFVYLCTNALLMEKKMDDYAPSPYFVWSVHLDGDR EEECCCCCHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCCCEEEEEEEECCCC EMHDHSVSQEGVYDKAVAAIREAKRRGFRVNINCTLFNDALPERVAKFFDTLGPIGVDGI CHHHCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEEECHHHHHHHHHHHHHCCCCCCCCE TVSPGYAYERAPDQQHFLNRDKTKNLFREVFKRGEGGKRWSFSQSSLFLDFLAGNQTYKC EECCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHEEEEEECCCCEEEE TPWGNPARTVFGWQKPCYLVGEGYVKTFKELMESTDWDNYGVGNYEKCADCMVHCGFEAT CCCCCCCHHHCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHH AVMDTIAHPLKALKVSMSGIRTEGAFAPDIPIDNQRPAEYVFSRHVEIKLEEIQRAGKGK HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEHHHHHHCCCCC LQKAPKPAATA CCCCCCCCCCC >Mature Secondary Structure MRQHLSGNKRYPLALMLEPLFRCNLACNGCGKIDYPDPILNQRLSVEECLQAVDECGAPV CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCE VSIAGGEPLLHKEMPEIVKGIMKRKKFVYLCTNALLMEKKMDDYAPSPYFVWSVHLDGDR EEECCCCCHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCCCEEEEEEEECCCC EMHDHSVSQEGVYDKAVAAIREAKRRGFRVNINCTLFNDALPERVAKFFDTLGPIGVDGI CHHHCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEEECHHHHHHHHHHHHHCCCCCCCCE TVSPGYAYERAPDQQHFLNRDKTKNLFREVFKRGEGGKRWSFSQSSLFLDFLAGNQTYKC EECCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHEEEEEECCCCEEEE TPWGNPARTVFGWQKPCYLVGEGYVKTFKELMESTDWDNYGVGNYEKCADCMVHCGFEAT CCCCCCCHHHCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHH AVMDTIAHPLKALKVSMSGIRTEGAFAPDIPIDNQRPAEYVFSRHVEIKLEEIQRAGKGK HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEHHHHHHCCCCC LQKAPKPAATA CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA