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The map label for this gene is ycjN [C]

Identifier: 76817686

GI number: 76817686

Start: 345442

End: 346722

Strand: Direct

Name: ycjN [C]

Synonym: BURPS1710b_A0230

Alternate gene names: 76817686

Gene position: 345442-346722 (Clockwise)

Preceding gene: 76818436

Following gene: 76819255

Centisome position: 10.86

GC content: 69.01

Gene sequence:

>1281_bases
GTGAATACGATACGATTGCTTGGCGCCGCCGCGCTCGTCGGCGCATGCGCGCCGCTCGCGGCGGCGGCCGCGACGCCAGT
CTGCAAGGTGCCGACGCTGAAGGTCCTCGCGCAGAAGAGCCTCGGGCTCTCGGTGATGGAGAAATCGCTGCCCGACTACG
AGAAGACGAGCGGCACCCGGATCGAGATCAATTACTTCGGCGAGAACGACCGCCGTGCGAAATCGCGTCTCGACGCGTCG
ACGGGCGCGGGCTCGTATCAGATCTACTACGTCGACGAGGCCAACGTCGCCGAATTCGCATCGGCCGGCTGGATCGCGCC
GCTCCTCAAGTACTACCCGAAGGAATACGATTACGACGACTTCCTGCCGGGCCGCCGCGCGGTGGCGAGCTACAAGGGCG
TCGCGTACTTCGCGCCGCTCATCGGCGGGGGCGATTTCCTGTTCTACCGGCGCGACCTCCTCGACGCCGCGCACCTGCCG
GTGCCGAAGACGCTGGACGAACTCGTCGCCGCGGTCCGCAAGCTGAACGCGCCGCCGAAGCTGTACGGCTGGGTCGCGCG
CGGCCAGCGCGGCTCGGGCATGAACGTGTGGCGCTGGGCGCCGTTCATGCTCGCGCAGGGCGGCGCATGGACCGACCCGC
ACGGCCAGCCGGCGTTCAACTCGCCCGCCGCGGTGCAGGCGACCGAGCGCTACCGCGATCTCTTCAAGTACGCGCCGCCG
GGCGCCGCGACCTACGACTGGAGCAACGCGCTCGAAGCGTTCCGCTCGGGCAAGGTCGCGTTCATGATCGAATCGACGCC
GTTCGCCGACTGGATGGAGGACCCATCCAAGTCGAGCGTCGCGGGCAAGGTCGGCTACGCGAGGCCGCCCGCGCCGCTGC
CGTCGGCCGCTTACGGGCACGGGCTCGCGATCTCGTCGGTCGGCGCGAAGGACGACTGCACGCGGCAGGCGGCGGGCCGC
TTCATCGCATGGGCGACGAGCAAGGAGCAGGAGCAGGCGCGGCTGCGCAACGGCGTGTTCAGCGACTACAACCGCACGAG
CACGATCGGCAGCGACTACTTCAGGCAACACGTGAAGCCGCAGATCCTCGCCGGCCTGAACGATACGAACCCGGTGACGA
AGGCGACGATCTGGGCGACGCCGCAATGGCCCGATATCGGCGACAACCTCGGCGTCGCGCTCGAGGAAGTCTTCACCGGC
ACGCAGACCGACGTGCGCGGCGCGCTCGACGACGCGGCGCAGTACGCGAAGGACGCGATGGCGCACGGCGCGCGCAAGTG
A

Upstream 100 bases:

>100_bases
TTCTTTTGACGTAGTGGAGCGCCGTCGCGAATCACTACAGTTGCTCCTGCCGTCGGCGCGGCCCGCGCGGCGGACGACAA
GCACAATCAAGGAGACACGG

Downstream 100 bases:

>100_bases
CGCGAGTGGCGCGAGGCACGCGACGGCGCGACCGTCAGATGAAGGCGCGCCGACGCGACGCCGCGCGCCGCCCGCAGCCC
CCCCGTCCGCGCCGCTGCCT

Product: putative transporter periplasmic binding protein

Products: NA

Alternate protein names: ABC-Type Sugar Transport System Periplasmic Component; Sugar ABC Transporter Periplasmic Component; Sugar ABC Transporter; Sugar ABC Transporter Periplasmic Component-Like Protein; ABC Transporter; ABC Sugar Transporter; Trehalosemaltose ABC Transporter; ABC Transporter For Sugars; Transporter-Like Exported Protein; Sorbitol/Mannitol ABC Transporter

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MNTIRLLGAAALVGACAPLAAAAATPVCKVPTLKVLAQKSLGLSVMEKSLPDYEKTSGTRIEINYFGENDRRAKSRLDAS
TGAGSYQIYYVDEANVAEFASAGWIAPLLKYYPKEYDYDDFLPGRRAVASYKGVAYFAPLIGGGDFLFYRRDLLDAAHLP
VPKTLDELVAAVRKLNAPPKLYGWVARGQRGSGMNVWRWAPFMLAQGGAWTDPHGQPAFNSPAAVQATERYRDLFKYAPP
GAATYDWSNALEAFRSGKVAFMIESTPFADWMEDPSKSSVAGKVGYARPPAPLPSAAYGHGLAISSVGAKDDCTRQAAGR
FIAWATSKEQEQARLRNGVFSDYNRTSTIGSDYFRQHVKPQILAGLNDTNPVTKATIWATPQWPDIGDNLGVALEEVFTG
TQTDVRGALDDAAQYAKDAMAHGARK

Sequences:

>Translated_426_residues
MNTIRLLGAAALVGACAPLAAAAATPVCKVPTLKVLAQKSLGLSVMEKSLPDYEKTSGTRIEINYFGENDRRAKSRLDAS
TGAGSYQIYYVDEANVAEFASAGWIAPLLKYYPKEYDYDDFLPGRRAVASYKGVAYFAPLIGGGDFLFYRRDLLDAAHLP
VPKTLDELVAAVRKLNAPPKLYGWVARGQRGSGMNVWRWAPFMLAQGGAWTDPHGQPAFNSPAAVQATERYRDLFKYAPP
GAATYDWSNALEAFRSGKVAFMIESTPFADWMEDPSKSSVAGKVGYARPPAPLPSAAYGHGLAISSVGAKDDCTRQAAGR
FIAWATSKEQEQARLRNGVFSDYNRTSTIGSDYFRQHVKPQILAGLNDTNPVTKATIWATPQWPDIGDNLGVALEEVFTG
TQTDVRGALDDAAQYAKDAMAHGARK
>Mature_426_residues
MNTIRLLGAAALVGACAPLAAAAATPVCKVPTLKVLAQKSLGLSVMEKSLPDYEKTSGTRIEINYFGENDRRAKSRLDAS
TGAGSYQIYYVDEANVAEFASAGWIAPLLKYYPKEYDYDDFLPGRRAVASYKGVAYFAPLIGGGDFLFYRRDLLDAAHLP
VPKTLDELVAAVRKLNAPPKLYGWVARGQRGSGMNVWRWAPFMLAQGGAWTDPHGQPAFNSPAAVQATERYRDLFKYAPP
GAATYDWSNALEAFRSGKVAFMIESTPFADWMEDPSKSSVAGKVGYARPPAPLPSAAYGHGLAISSVGAKDDCTRQAAGR
FIAWATSKEQEQARLRNGVFSDYNRTSTIGSDYFRQHVKPQILAGLNDTNPVTKATIWATPQWPDIGDNLGVALEEVFTG
TQTDVRGALDDAAQYAKDAMAHGARK

Specific function: Probably Part Of The Binding-Protein-Dependent Transport System Ycjnop. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46212; Mature: 46212

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTIRLLGAAALVGACAPLAAAAATPVCKVPTLKVLAQKSLGLSVMEKSLPDYEKTSGTR
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHCCCCHHHCCCCE
IEINYFGENDRRAKSRLDASTGAGSYQIYYVDEANVAEFASAGWIAPLLKYYPKEYDYDD
EEEEEECCCCHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHCCHHHHHHHHCCCCCCCCC
FLPGRRAVASYKGVAYFAPLIGGGDFLFYRRDLLDAAHLPVPKTLDELVAAVRKLNAPPK
CCCCHHHHHHHCCHHEEHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH
LYGWVARGQRGSGMNVWRWAPFMLAQGGAWTDPHGQPAFNSPAAVQATERYRDLFKYAPP
HHHHHHCCCCCCCCCHHEECHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
GAATYDWSNALEAFRSGKVAFMIESTPFADWMEDPSKSSVAGKVGYARPPAPLPSAAYGH
CCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GLAISSVGAKDDCTRQAAGRFIAWATSKEQEQARLRNGVFSDYNRTSTIGSDYFRQHVKP
CEEEECCCCCCHHHHHHCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCH
QILAGLNDTNPVTKATIWATPQWPDIGDNLGVALEEVFTGTQTDVRGALDDAAQYAKDAM
HEEECCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
AHGARK
HCCCCC
>Mature Secondary Structure
MNTIRLLGAAALVGACAPLAAAAATPVCKVPTLKVLAQKSLGLSVMEKSLPDYEKTSGTR
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHCCCCHHHCCCCE
IEINYFGENDRRAKSRLDASTGAGSYQIYYVDEANVAEFASAGWIAPLLKYYPKEYDYDD
EEEEEECCCCHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHCCHHHHHHHHCCCCCCCCC
FLPGRRAVASYKGVAYFAPLIGGGDFLFYRRDLLDAAHLPVPKTLDELVAAVRKLNAPPK
CCCCHHHHHHHCCHHEEHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH
LYGWVARGQRGSGMNVWRWAPFMLAQGGAWTDPHGQPAFNSPAAVQATERYRDLFKYAPP
HHHHHHCCCCCCCCCHHEECHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
GAATYDWSNALEAFRSGKVAFMIESTPFADWMEDPSKSSVAGKVGYARPPAPLPSAAYGH
CCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GLAISSVGAKDDCTRQAAGRFIAWATSKEQEQARLRNGVFSDYNRTSTIGSDYFRQHVKP
CEEEECCCCCCHHHHHHCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCH
QILAGLNDTNPVTKATIWATPQWPDIGDNLGVALEEVFTGTQTDVRGALDDAAQYAKDAM
HEEECCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
AHGARK
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA