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The map label for this gene is ybjJ [C]

Identifier: 76818436

GI number: 76818436

Start: 342684

End: 343820

Strand: Direct

Name: ybjJ [C]

Synonym: BURPS1710b_A0228

Alternate gene names: 76818436

Gene position: 342684-343820 (Clockwise)

Preceding gene: 76817843

Following gene: 76817686

Centisome position: 10.77

GC content: 73.35

Gene sequence:

>1137_bases
ATGTCTTCCGATCGGCCGGCTACCCGGCTTGCCACCCGTCTCGCCTTTCTCGTCGCGGGCTTCGGCGTCGCGTGCTGGGC
GCCGCTCGTGCCGTTCGCGAAGGCGCGGCTCGGCGTCGACGACGCCGTGCTCGGCGCGCTGCTGCTGTGCGTCGGCCTCG
GCTCGGTGATCGCGATGCTGATCACGGGCCCGCTCGGCACGCGATACGGCAGCCGGCCGATCATCGTCGCGGGCGGCGTC
GCGCTGGCCGCGATCCTGCCGCTGCTGTCCGTCGCGAACACGACGCCCGCGCTCGGCTTCGCGCTGCTCGCGTTCGGCGC
CGCGCTCGGCTCGCTCGACGTGGCGATGAACGTGCATGCGATCGAAGTCGAGCACGCCGCCGCGCGGCCGCTGATGTCCG
GGTTTCATGCGCTCTTCAGCGTCGGCGGCATCGCGGGCTCGAGCGTCATGACGTTCCTGCTGTCGATGCGCGTCGGCGCG
TTCGCGAGCACGCTGCTGTGCTCGGCGCCGATGTTCGCCGCGATCCTCGTCGCCCGCCCCCGGCTGCTGCGCGCCGCGCG
GGCGGCCGCCCGGCCGCGGTTCGCGATGCCGCGCGGCGTCGTGCCGCTGCTCGCGATGCTCGCCGCGATCACGTTCCTCG
CCGAAGGCGCGCTGCTCGACTGGAGCGCGCTGCTGATCACCGACAAGGGGCTCGTCGCCGCGGCGCAGGGCGGGCTCGGC
TACCTGCTGTTCTCGATCGCGATGACCGCGGGCCGGCTCGGCGGAGACGCGATCGCGGCGCGCGTGGGCGACCGCTCGAC
GATGTTCTGGGGCGGCCTGCTCGCCGTGGCCGGATTCGTGATGCTGCTTGCCGCGCCAATTGCCGGCGTCGCGATGGCGG
GCTTCCTGCTGATCGGCCTCGGCGCGTCGAACATCGTGCCCGTGCTGTTCCGCCGGGCGGGCGCGCAGCAGGCGATGCCT
TCCGCGCTCGCCGTCACGCTGATCACGATCACCGGCTACGCGGGCCATCTGGCCGGCCCGGCCGGGATGGGGTTCGTCGC
GCGCAGCGTCGGGCTCGAAAGCGCGTTCTGGATGCTCGCCGCCCTGCTGGGCATCGTGCCGCTCTGCGCTCGCGTGGTGA
CGGCGAACCGAACGTAG

Upstream 100 bases:

>100_bases
GGACCGCGCGGCGCTGTCGAGCGCCGGCGCGTCGATCCTCGCGGCGAACCCGCCCGCGCAGCCGTAACGCCCGCCCGTCA
TGCCTACGGAGCTCATCGAC

Downstream 100 bases:

>100_bases
CGGGCGGCGGCGTGTCGTCTGGATGCTGGATGCTGGATGCTGGATGCTGGATGCTGGATGCTGGATGCTGGATGCTGGAT
GCTGGATGCCGGTTGCCGGC

Product: putative transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 377

Protein sequence:

>378_residues
MSSDRPATRLATRLAFLVAGFGVACWAPLVPFAKARLGVDDAVLGALLLCVGLGSVIAMLITGPLGTRYGSRPIIVAGGV
ALAAILPLLSVANTTPALGFALLAFGAALGSLDVAMNVHAIEVEHAAARPLMSGFHALFSVGGIAGSSVMTFLLSMRVGA
FASTLLCSAPMFAAILVARPRLLRAARAAARPRFAMPRGVVPLLAMLAAITFLAEGALLDWSALLITDKGLVAAAQGGLG
YLLFSIAMTAGRLGGDAIAARVGDRSTMFWGGLLAVAGFVMLLAAPIAGVAMAGFLLIGLGASNIVPVLFRRAGAQQAMP
SALAVTLITITGYAGHLAGPAGMGFVARSVGLESAFWMLAALLGIVPLCARVVTANRT

Sequences:

>Translated_378_residues
MSSDRPATRLATRLAFLVAGFGVACWAPLVPFAKARLGVDDAVLGALLLCVGLGSVIAMLITGPLGTRYGSRPIIVAGGV
ALAAILPLLSVANTTPALGFALLAFGAALGSLDVAMNVHAIEVEHAAARPLMSGFHALFSVGGIAGSSVMTFLLSMRVGA
FASTLLCSAPMFAAILVARPRLLRAARAAARPRFAMPRGVVPLLAMLAAITFLAEGALLDWSALLITDKGLVAAAQGGLG
YLLFSIAMTAGRLGGDAIAARVGDRSTMFWGGLLAVAGFVMLLAAPIAGVAMAGFLLIGLGASNIVPVLFRRAGAQQAMP
SALAVTLITITGYAGHLAGPAGMGFVARSVGLESAFWMLAALLGIVPLCARVVTANRT
>Mature_377_residues
SSDRPATRLATRLAFLVAGFGVACWAPLVPFAKARLGVDDAVLGALLLCVGLGSVIAMLITGPLGTRYGSRPIIVAGGVA
LAAILPLLSVANTTPALGFALLAFGAALGSLDVAMNVHAIEVEHAAARPLMSGFHALFSVGGIAGSSVMTFLLSMRVGAF
ASTLLCSAPMFAAILVARPRLLRAARAAARPRFAMPRGVVPLLAMLAAITFLAEGALLDWSALLITDKGLVAAAQGGLGY
LLFSIAMTAGRLGGDAIAARVGDRSTMFWGGLLAVAGFVMLLAAPIAGVAMAGFLLIGLGASNIVPVLFRRAGAQQAMPS
ALAVTLITITGYAGHLAGPAGMGFVARSVGLESAFWMLAALLGIVPLCARVVTANRT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787068, Length=379, Percent_Identity=29.8153034300792, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 38242; Mature: 38111

Theoretical pI: Translated: 11.72; Mature: 11.72

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSDRPATRLATRLAFLVAGFGVACWAPLVPFAKARLGVDDAVLGALLLCVGLGSVIAML
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
ITGPLGTRYGSRPIIVAGGVALAAILPLLSVANTTPALGFALLAFGAALGSLDVAMNVHA
HHCCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEEE
IEVEHAAARPLMSGFHALFSVGGIAGSSVMTFLLSMRVGAFASTLLCSAPMFAAILVARP
EEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLLRAARAAARPRFAMPRGVVPLLAMLAAITFLAEGALLDWSALLITDKGLVAAAQGGLG
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHCCHHHEEECCCCEEECCCCHH
YLLFSIAMTAGRLGGDAIAARVGDRSTMFWGGLLAVAGFVMLLAAPIAGVAMAGFLLIGL
HHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GASNIVPVLFRRAGAQQAMPSALAVTLITITGYAGHLAGPAGMGFVARSVGLESAFWMLA
CCHHHHHHHHHHCCHHHHCCHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHCHHHHHHHHH
ALLGIVPLCARVVTANRT
HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SSDRPATRLATRLAFLVAGFGVACWAPLVPFAKARLGVDDAVLGALLLCVGLGSVIAML
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
ITGPLGTRYGSRPIIVAGGVALAAILPLLSVANTTPALGFALLAFGAALGSLDVAMNVHA
HHCCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEEE
IEVEHAAARPLMSGFHALFSVGGIAGSSVMTFLLSMRVGAFASTLLCSAPMFAAILVARP
EEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLLRAARAAARPRFAMPRGVVPLLAMLAAITFLAEGALLDWSALLITDKGLVAAAQGGLG
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHCCHHHEEECCCCEEECCCCHH
YLLFSIAMTAGRLGGDAIAARVGDRSTMFWGGLLAVAGFVMLLAAPIAGVAMAGFLLIGL
HHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GASNIVPVLFRRAGAQQAMPSALAVTLITITGYAGHLAGPAGMGFVARSVGLESAFWMLA
CCHHHHHHHHHHCCHHHHCCHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHCHHHHHHHHH
ALLGIVPLCARVVTANRT
HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]