| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is ilvB [H]
Identifier: 76817456
GI number: 76817456
Start: 2388755
End: 2390653
Strand: Direct
Name: ilvB [H]
Synonym: BURPS1710b_A1956
Alternate gene names: 76817456
Gene position: 2388755-2390653 (Clockwise)
Preceding gene: 76817690
Following gene: 76817935
Centisome position: 75.08
GC content: 66.46
Gene sequence:
>1899_bases ATGCGCGATGCCCGAACCGCGCGATGCGCCGGTCTCGGCGTCGTCGGCCGCGGGAGGCGAACGTCGCTCGAGCCCGGTCC CGCGGCGCGGATTGCGTCAACGAAGACATTCGAGCAATCGTTCGATCGTTCACGGGGCGCGCGACTTCGCCCATCCTTCC ATCGCAGTTTCACCGGCCGAGCCACGATGAAAGCCTCAAACGCCATCGCCCGATTTCTCGCCGCGCACGACGTTCGACAT TGTTTCGAGCTCGTCGGCGGAATGATCACGCATCTGCTCGACAGCTTCGCGGAAAGCGGGCGCTTTCAAATCGTGTCGAT GCATCACGAGCAGGCCGCCGCCTTTGCGGCGGAGGGCGTCGCGCGGCGCTACATGGGGCGCAAGGTGGCCGTCGCGCTGG GCACGAGCGGCCCGGGCGCGACGAATCTGATCACGGGCATCGGCAGTTGCTGGCTGGATTCCGTTCCGTGCGTGTTCATC ACCGGGCAAGTCAATACGCACGAGCTGAAAGGCGAGCGGGCGATACGGCAGCAGGGTTTCCAGGAGCTCGACATCGTGCC GATGGTGCGCTCGATCACCAAGCATGCGGTGCAAGTCAGCGACGCGAACGAACTGCTGCCGGCGCTGCACGGCGCGCTGT CCGCGGCGCTGTCCGGCCGGCAGGGCCCCGTCCTCATCGACATTCCGAACGACGTGCAGCGCGCCGAGATCGCGGACGCC GCTGTCGATCGATGGCTGGGCGAGCCGTTGCGCATCCGCGATCGATGCGAGCCCGGCGATCGCGACATCGACGCGCTGCG CGAGCTGTGCCGCTCGTCCTCGCGGCCGCTCGTGTGCTTCGGCGGCGGCGCGCGCTGGGCGCCGTCGATGCCCGCGTGGA TCGCCGCATTGGAGGACGCGCGGATTCCCTACGTCAGCACCTTGATGGGACACGAGCGCGTGCCCGCCGGCGCGCACTAT TTCAACATGATCGGCGCGTACGGCAATCGGGAAGCGAACTGGGCCGTGCAGCACTGCGATCTGCTGATCGTGATCGGCGC GCGTCTCGACGTGCGCCAGACCGGCGCGGACGTCGGCGATTTCGCGCGTCATGCGCGGGTCATTCAGATCGACATCGATC CCGCTCAGTTGAACAACCGCATCAAGGTCGAGCAGGCCTTGTGCTGTGACGCGGAATCGTTCTTTCGGCGGTTTGCCGTG CGGCGCGATACGTTCGCCGGCATCCGGCCGGATTGGGCGGACCAGCTCGCCACGCTGAGAACGGCGCATGCCCGCAACGA GTACCCGGACTGGAACATCAGCCCCGGCGTCGTGTTCGCGCGCCTGAACGAGGCGATGGCCGGCAAGGCGGTTCACTACG TGTGCGACGTGGGCAATCATCAAATGTGGGCCGCGCAGGGCCTTCGGCTGGGCGCGACCCAAGCCGTCCACTACAGCGGC GGCATGGGCGCGATGGGTTTCGCGCTGCCGACCGCGATCGGCATCGCGTGCAGCGGCGACGGCGGCGGCAAGACCGTCGT GATCACGGGCGACGGCAGCCTGCAGGTGAACGTGCAGGAGCTCGATACGCTGAGCCGGCTGCAACTCGATGTGGCCATCG TGGTGATGAACAATTATTCGCTCGGCATGGTCAAGAATTTTCAGGACATGTATTTCGACGGCAAGAACATCTCGACCAAG CAAGGCTATAGCTGCCCGTCGTTCGTCGCGCTCGCGCGCGCCTATGGCATCGAGAGCATGACGGTCGCCGCGCCGGCCGA GCTGCAACGGGCGATCGACCGGGTGGCGGGCTCGCGCCGGCCGTTGCTCGTCGAAATCGCGATGCCGGAGGCGACGGAGT GTCGGCCCCGGCTCGCCTTCGGCCGAAAGCTCGACGATCAGTATCCGAAACTCGATTAA
Upstream 100 bases:
>100_bases GTGCGGCTGCGCGCGCAACTGCTGGGTATCGTCAAGGACGGCGCTTGAGTCGTCATTGCGGTATGCGTCGAGACTCCCGG CGCGGACGGGCGTCGGCCGG
Downstream 100 bases:
>100_bases GCGCCGCCGGCATGCGCGCCGCAAGCGGCGCGGGCAATGCGCCGCGTGCGGCGCCCGCTCGCGATCTGCCTCGTGTTCAG ACCGATGCGTCGCGGCTGCC
Product: acetolactate synthase large subunit
Products: NA
Alternate protein names: AHAS; Acetohydroxy-acid synthase large subunit; ALS; Vegetative protein 105; VEG105 [H]
Number of amino acids: Translated: 632; Mature: 632
Protein sequence:
>632_residues MRDARTARCAGLGVVGRGRRTSLEPGPAARIASTKTFEQSFDRSRGARLRPSFHRSFTGRATMKASNAIARFLAAHDVRH CFELVGGMITHLLDSFAESGRFQIVSMHHEQAAAFAAEGVARRYMGRKVAVALGTSGPGATNLITGIGSCWLDSVPCVFI TGQVNTHELKGERAIRQQGFQELDIVPMVRSITKHAVQVSDANELLPALHGALSAALSGRQGPVLIDIPNDVQRAEIADA AVDRWLGEPLRIRDRCEPGDRDIDALRELCRSSSRPLVCFGGGARWAPSMPAWIAALEDARIPYVSTLMGHERVPAGAHY FNMIGAYGNREANWAVQHCDLLIVIGARLDVRQTGADVGDFARHARVIQIDIDPAQLNNRIKVEQALCCDAESFFRRFAV RRDTFAGIRPDWADQLATLRTAHARNEYPDWNISPGVVFARLNEAMAGKAVHYVCDVGNHQMWAAQGLRLGATQAVHYSG GMGAMGFALPTAIGIACSGDGGGKTVVITGDGSLQVNVQELDTLSRLQLDVAIVVMNNYSLGMVKNFQDMYFDGKNISTK QGYSCPSFVALARAYGIESMTVAAPAELQRAIDRVAGSRRPLLVEIAMPEATECRPRLAFGRKLDDQYPKLD
Sequences:
>Translated_632_residues MRDARTARCAGLGVVGRGRRTSLEPGPAARIASTKTFEQSFDRSRGARLRPSFHRSFTGRATMKASNAIARFLAAHDVRH CFELVGGMITHLLDSFAESGRFQIVSMHHEQAAAFAAEGVARRYMGRKVAVALGTSGPGATNLITGIGSCWLDSVPCVFI TGQVNTHELKGERAIRQQGFQELDIVPMVRSITKHAVQVSDANELLPALHGALSAALSGRQGPVLIDIPNDVQRAEIADA AVDRWLGEPLRIRDRCEPGDRDIDALRELCRSSSRPLVCFGGGARWAPSMPAWIAALEDARIPYVSTLMGHERVPAGAHY FNMIGAYGNREANWAVQHCDLLIVIGARLDVRQTGADVGDFARHARVIQIDIDPAQLNNRIKVEQALCCDAESFFRRFAV RRDTFAGIRPDWADQLATLRTAHARNEYPDWNISPGVVFARLNEAMAGKAVHYVCDVGNHQMWAAQGLRLGATQAVHYSG GMGAMGFALPTAIGIACSGDGGGKTVVITGDGSLQVNVQELDTLSRLQLDVAIVVMNNYSLGMVKNFQDMYFDGKNISTK QGYSCPSFVALARAYGIESMTVAAPAELQRAIDRVAGSRRPLLVEIAMPEATECRPRLAFGRKLDDQYPKLD >Mature_632_residues MRDARTARCAGLGVVGRGRRTSLEPGPAARIASTKTFEQSFDRSRGARLRPSFHRSFTGRATMKASNAIARFLAAHDVRH CFELVGGMITHLLDSFAESGRFQIVSMHHEQAAAFAAEGVARRYMGRKVAVALGTSGPGATNLITGIGSCWLDSVPCVFI TGQVNTHELKGERAIRQQGFQELDIVPMVRSITKHAVQVSDANELLPALHGALSAALSGRQGPVLIDIPNDVQRAEIADA AVDRWLGEPLRIRDRCEPGDRDIDALRELCRSSSRPLVCFGGGARWAPSMPAWIAALEDARIPYVSTLMGHERVPAGAHY FNMIGAYGNREANWAVQHCDLLIVIGARLDVRQTGADVGDFARHARVIQIDIDPAQLNNRIKVEQALCCDAESFFRRFAV RRDTFAGIRPDWADQLATLRTAHARNEYPDWNISPGVVFARLNEAMAGKAVHYVCDVGNHQMWAAQGLRLGATQAVHYSG GMGAMGFALPTAIGIACSGDGGGKTVVITGDGSLQVNVQELDTLSRLQLDVAIVVMNNYSLGMVKNFQDMYFDGKNISTK QGYSCPSFVALARAYGIESMTVAAPAELQRAIDRVAGSRRPLLVEIAMPEATECRPRLAFGRKLDDQYPKLD
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=591, Percent_Identity=23.3502538071066, Blast_Score=122, Evalue=1e-27, Organism=Homo sapiens, GI21361361, Length=540, Percent_Identity=25, Blast_Score=102, Evalue=2e-21, Organism=Escherichia coli, GI87081685, Length=580, Percent_Identity=31.3793103448276, Blast_Score=249, Evalue=4e-67, Organism=Escherichia coli, GI1790104, Length=578, Percent_Identity=32.6989619377163, Blast_Score=242, Evalue=6e-65, Organism=Escherichia coli, GI1786717, Length=587, Percent_Identity=27.427597955707, Blast_Score=186, Evalue=3e-48, Organism=Escherichia coli, GI1787096, Length=548, Percent_Identity=25.9124087591241, Blast_Score=128, Evalue=1e-30, Organism=Escherichia coli, GI1788716, Length=566, Percent_Identity=23.321554770318, Blast_Score=92, Evalue=7e-20, Organism=Caenorhabditis elegans, GI17542570, Length=524, Percent_Identity=25.1908396946565, Blast_Score=99, Evalue=6e-21, Organism=Caenorhabditis elegans, GI17531299, Length=439, Percent_Identity=24.1457858769932, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17531301, Length=446, Percent_Identity=24.8878923766816, Blast_Score=80, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6323755, Length=633, Percent_Identity=29.8578199052133, Blast_Score=240, Evalue=4e-64, Organism=Drosophila melanogaster, GI19922626, Length=584, Percent_Identity=24.3150684931507, Blast_Score=136, Evalue=5e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 68748; Mature: 68748
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDARTARCAGLGVVGRGRRTSLEPGPAARIASTKTFEQSFDRSRGARLRPSFHRSFTGR CCCCCCCHHHCCCEECCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCCHHHHCCCCC ATMKASNAIARFLAAHDVRHCFELVGGMITHLLDSFAESGRFQIVSMHHEQAAAFAAEGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHH ARRYMGRKVAVALGTSGPGATNLITGIGSCWLDSVPCVFITGQVNTHELKGERAIRQQGF HHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHCCHHHHHHCCC QELDIVPMVRSITKHAVQVSDANELLPALHGALSAALSGRQGPVLIDIPNDVQRAEIADA HHCCHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHH AVDRWLGEPLRIRDRCEPGDRDIDALRELCRSSSRPLVCFGGGARWAPSMPAWIAALEDA HHHHHCCCCCEECCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHCC RIPYVSTLMGHERVPAGAHYFNMIGAYGNREANWAVQHCDLLIVIGARLDVRQTGADVGD CCCHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCHHHHCCEEEEECCCEEHHHCCCCHHH FARHARVIQIDIDPAQLNNRIKVEQALCCDAESFFRRFAVRRDTFAGIRPDWADQLATLR HHHCCEEEEEECCHHHHCCEEEEHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH TAHARNEYPDWNISPGVVFARLNEAMAGKAVHYVCDVGNHQMWAAQGLRLGATQAVHYSG HHHHCCCCCCCCCCCCEEEEHHHHHHHCCEEEEEEECCCCEEEHHCCCEECCCEEEEECC GMGAMGFALPTAIGIACSGDGGGKTVVITGDGSLQVNVQELDTLSRLQLDVAIVVMNNYS CCCHHHHHHHHHHEEEECCCCCCEEEEEECCCCEEEEHHHHHHHHHHEEEEEEEEECCCC LGMVKNFQDMYFDGKNISTKQGYSCPSFVALARAYGIESMTVAAPAELQRAIDRVAGSRR CCHHHCHHHHEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHCCCC PLLVEIAMPEATECRPRLAFGRKLDDQYPKLD CEEEEEECCCCCCCCCHHHHCCCCCCCCCCCC >Mature Secondary Structure MRDARTARCAGLGVVGRGRRTSLEPGPAARIASTKTFEQSFDRSRGARLRPSFHRSFTGR CCCCCCCHHHCCCEECCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCCHHHHCCCCC ATMKASNAIARFLAAHDVRHCFELVGGMITHLLDSFAESGRFQIVSMHHEQAAAFAAEGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHH ARRYMGRKVAVALGTSGPGATNLITGIGSCWLDSVPCVFITGQVNTHELKGERAIRQQGF HHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHCCHHHHHHCCC QELDIVPMVRSITKHAVQVSDANELLPALHGALSAALSGRQGPVLIDIPNDVQRAEIADA HHCCHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHH AVDRWLGEPLRIRDRCEPGDRDIDALRELCRSSSRPLVCFGGGARWAPSMPAWIAALEDA HHHHHCCCCCEECCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHCC RIPYVSTLMGHERVPAGAHYFNMIGAYGNREANWAVQHCDLLIVIGARLDVRQTGADVGD CCCHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCHHHHCCEEEEECCCEEHHHCCCCHHH FARHARVIQIDIDPAQLNNRIKVEQALCCDAESFFRRFAVRRDTFAGIRPDWADQLATLR HHHCCEEEEEECCHHHHCCEEEEHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH TAHARNEYPDWNISPGVVFARLNEAMAGKAVHYVCDVGNHQMWAAQGLRLGATQAVHYSG HHHHCCCCCCCCCCCCEEEEHHHHHHHCCEEEEEEECCCCEEEHHCCCEECCCEEEEECC GMGAMGFALPTAIGIACSGDGGGKTVVITGDGSLQVNVQELDTLSRLQLDVAIVVMNNYS CCCHHHHHHHHHHEEEECCCCCCEEEEEECCCCEEEEHHHHHHHHHHEEEEEEEEECCCC LGMVKNFQDMYFDGKNISTKQGYSCPSFVALARAYGIESMTVAAPAELQRAIDRVAGSRR CCHHHCHHHHEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHCCCC PLLVEIAMPEATECRPRLAFGRKLDDQYPKLD CEEEEEECCCCCCCCCHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969504; 9384377; 1577690; 9298659 [H]