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The map label for this gene is yraR [H]

Identifier: 76817248

GI number: 76817248

Start: 2431089

End: 2431838

Strand: Direct

Name: yraR [H]

Synonym: BURPS1710b_A1996

Alternate gene names: 76817248

Gene position: 2431089-2431838 (Clockwise)

Preceding gene: 76818762

Following gene: 76818278

Centisome position: 76.41

GC content: 73.07

Gene sequence:

>750_bases
ATGCGCGACGCCGGGCGCGAGCCGCCCAGGCGGTGCCCGCCCGCCGCTTGGGCAGCGGGGAGGCCGCCGTCGATTCGGAC
GCGCGATACGCGATATGCGATACGCATCGAGGCATTCACGATGAAACTGCTGCTCGTCGGATCGACCGGGCTCGTCGGCC
GCCACGTGCTGGAGCTGGCATTGGCCGATCCGCGCGTCGACGGCGTGACGGCGCTCGCGCGCCGCGCGTTGCCCGCGCAT
CCGAAGCTGCACGCGCTGCGCGTCGATTTCGATCGCCTGCCCGAAGACGCGCCGTGGTGGCGCGCCGACGCGGCGATCTG
CACGCTCGGCACGACGATGCGCGCGGCCGGCTCTCGGCCCGCGTTTCGGCGGGTCGATCACGACTATCCGCTCGAGGTCG
CGCGGATCGCCCGCCGGCACGGCACGCCGACATACGTGCTCAATTCGGCGCTCGGCGCGGACCCGTCGTCGCGCTTTTTC
TACAACCGCGTGAAGGGCGAGCTGGAGCGGGATCTGGCCGGCCTGGGGTTCGCGTCGTTTACCGCGGTGCGGCCTGGCCT
GATCGGCGGGCAGCGGGACGCGTTCCGCGCCGGCGAGCGAGCCGCGGTGCTCGCGCTCACGCTGTTCGGGCCGCTGCTGC
CGCGCGGCTGGCGGCTCAACCCGGCGCAGCGGATCGCCGGCGCGTTGCTCGACGCGGCGCTGAATCCCGCGCCGGGCTTG
CACGTCGTCGCGTCCGATCAACTGGTCTGA

Upstream 100 bases:

>100_bases
CTGCCCGGCAGGTGCCGACCGTCCGGGCTGCAACGGGCGCGTCGACCCGCCATGACCGCCCGGCGTGTACGCCGGCATTC
GACCCACGCAGATCGCGTGC

Downstream 100 bases:

>100_bases
TCGCCGCGCGCGGGCGGCTCGGACGCCGGCGATTCTCGGCCGTGGGCCCTCGGTTTTCTGCCCCTCGGTTTTCGATGCTC
GGTGTTCGATGCTCGGTACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MRDAGREPPRRCPPAAWAAGRPPSIRTRDTRYAIRIEAFTMKLLLVGSTGLVGRHVLELALADPRVDGVTALARRALPAH
PKLHALRVDFDRLPEDAPWWRADAAICTLGTTMRAAGSRPAFRRVDHDYPLEVARIARRHGTPTYVLNSALGADPSSRFF
YNRVKGELERDLAGLGFASFTAVRPGLIGGQRDAFRAGERAAVLALTLFGPLLPRGWRLNPAQRIAGALLDAALNPAPGL
HVVASDQLV

Sequences:

>Translated_249_residues
MRDAGREPPRRCPPAAWAAGRPPSIRTRDTRYAIRIEAFTMKLLLVGSTGLVGRHVLELALADPRVDGVTALARRALPAH
PKLHALRVDFDRLPEDAPWWRADAAICTLGTTMRAAGSRPAFRRVDHDYPLEVARIARRHGTPTYVLNSALGADPSSRFF
YNRVKGELERDLAGLGFASFTAVRPGLIGGQRDAFRAGERAAVLALTLFGPLLPRGWRLNPAQRIAGALLDAALNPAPGL
HVVASDQLV
>Mature_249_residues
MRDAGREPPRRCPPAAWAAGRPPSIRTRDTRYAIRIEAFTMKLLLVGSTGLVGRHVLELALADPRVDGVTALARRALPAH
PKLHALRVDFDRLPEDAPWWRADAAICTLGTTMRAAGSRPAFRRVDHDYPLEVARIARRHGTPTYVLNSALGADPSSRFF
YNRVKGELERDLAGLGFASFTAVRPGLIGGQRDAFRAGERAAVLALTLFGPLLPRGWRLNPAQRIAGALLDAALNPAPGL
HVVASDQLV

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To yeast YER004W [H]

Homologues:

Organism=Homo sapiens, GI148728166, Length=228, Percent_Identity=32.8947368421053, Blast_Score=96, Evalue=2e-20,
Organism=Homo sapiens, GI148728172, Length=211, Percent_Identity=33.6492890995261, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI148728168, Length=211, Percent_Identity=33.6492890995261, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI148728164, Length=211, Percent_Identity=33.6492890995261, Blast_Score=96, Evalue=4e-20,
Organism=Escherichia coli, GI87082218, Length=219, Percent_Identity=34.2465753424658, Blast_Score=109, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI71983631, Length=210, Percent_Identity=36.6666666666667, Blast_Score=127, Evalue=4e-30,
Organism=Saccharomyces cerevisiae, GI6320840, Length=162, Percent_Identity=35.8024691358025, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000534 [H]

Pfam domain/function: PF01118 Semialdhyde_dh [H]

EC number: NA

Molecular weight: Translated: 27080; Mature: 27080

Theoretical pI: Translated: 11.58; Mature: 11.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDAGREPPRRCPPAAWAAGRPPSIRTRDTRYAIRIEAFTMKLLLVGSTGLVGRHVLELA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCCCHHHHHHHHHH
LADPRVDGVTALARRALPAHPKLHALRVDFDRLPEDAPWWRADAAICTLGTTMRAAGSRP
HCCCCCHHHHHHHHHCCCCCCCEEEEEECHHHCCCCCCCCCCCCEEEECCHHHHHCCCCC
AFRRVDHDYPLEVARIARRHGTPTYVLNSALGADPSSRFFYNRVKGELERDLAGLGFASF
HHHHCCCCCCHHHHHHHHHCCCCCEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHH
TAVRPGLIGGQRDAFRAGERAAVLALTLFGPLLPRGWRLNPAQRIAGALLDAALNPAPGL
HHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCE
HVVASDQLV
EEEECCCCC
>Mature Secondary Structure
MRDAGREPPRRCPPAAWAAGRPPSIRTRDTRYAIRIEAFTMKLLLVGSTGLVGRHVLELA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCCCHHHHHHHHHH
LADPRVDGVTALARRALPAHPKLHALRVDFDRLPEDAPWWRADAAICTLGTTMRAAGSRP
HCCCCCHHHHHHHHHCCCCCCCEEEEEECHHHCCCCCCCCCCCCEEEECCHHHHHCCCCC
AFRRVDHDYPLEVARIARRHGTPTYVLNSALGADPSSRFFYNRVKGELERDLAGLGFASF
HHHHCCCCCCHHHHHHHHHCCCCCEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHH
TAVRPGLIGGQRDAFRAGERAAVLALTLFGPLLPRGWRLNPAQRIAGALLDAALNPAPGL
HHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCE
HVVASDQLV
EEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]