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The map label for this gene is yddH [H]

Identifier: 76818278

GI number: 76818278

Start: 2432482

End: 2433087

Strand: Direct

Name: yddH [H]

Synonym: BURPS1710b_A1998

Alternate gene names: 76818278

Gene position: 2432482-2433087 (Clockwise)

Preceding gene: 76817248

Following gene: 76818803

Centisome position: 76.45

GC content: 67.49

Gene sequence:

>606_bases
ATGAACAGTCACATCGCGGCGGTCGACCTGAAAAAAGCTTACCGGCTCATCAATCATGGCCCGACGGTGCTCGTATCCGC
GCATCACGACGGCGTGGACAACGTAATGGCGGCGGCATGGGCGTGCGCGCTGGATTTCTCGCCTCCGAAGCTGACGGTGG
TGCTCGACAAGGCCGCGAAGACGCGCGAGCTGATCGAGCAGAGCGGACGCTTCGTCATCCAGGTGCCGACGGCCGCGCAG
TTGCAGCTCACGCAGGAAGTCGGCAGCCATAGCCTGGCAAGCCGCCCGGACAAGCTGCGGCGCGCCGGCGTGGAGCTCTT
TTCGATCGACGGGCACGACGCGCCGTTCGTCGCGGGCTGCTCGGCGTGGCTCGCCTGCACGCTCGTGCGGGAGCCGCACA
ATCAGCAGGCGTACGACCTGTTCATCGGCGAGGTCGACGCCGCGTGGTCCGATACGCGCGCGTTCAAGAACGGGCGCTGG
CAATTCGAGCAGGCCGATCCCGCGTGGCGAAGCCTGCACCATGTCGCGGGCGGCCACTTCTACGCGATCGGCGAGGCGCT
GTCGGCCCGCGAGGCCGATAGGCACGACGCCGAGGCCGCGCTATAG

Upstream 100 bases:

>100_bases
CATCGGCGCGACGAAGACGCCCGCCGCCCGTCGCGGGAGCAAAGGCCCGCGCGCGCCGCGCGACATCGCCTCGACGGCAG
GATTTTTTTACGGAGTCTGA

Downstream 100 bases:

>100_bases
ACGCGGGCGTCGCGTGCGTGCGGGCGCGCTTCGCCGAGCGGGGCATGATCGTGGGGCGCGCCGTGTCGCGCCGCCGGGTC
GCGCGCTGCGGCGGGCCCGC

Product: NAD(P)H-flavin oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MNSHIAAVDLKKAYRLINHGPTVLVSAHHDGVDNVMAAAWACALDFSPPKLTVVLDKAAKTRELIEQSGRFVIQVPTAAQ
LQLTQEVGSHSLASRPDKLRRAGVELFSIDGHDAPFVAGCSAWLACTLVREPHNQQAYDLFIGEVDAAWSDTRAFKNGRW
QFEQADPAWRSLHHVAGGHFYAIGEALSAREADRHDAEAAL

Sequences:

>Translated_201_residues
MNSHIAAVDLKKAYRLINHGPTVLVSAHHDGVDNVMAAAWACALDFSPPKLTVVLDKAAKTRELIEQSGRFVIQVPTAAQ
LQLTQEVGSHSLASRPDKLRRAGVELFSIDGHDAPFVAGCSAWLACTLVREPHNQQAYDLFIGEVDAAWSDTRAFKNGRW
QFEQADPAWRSLHHVAGGHFYAIGEALSAREADRHDAEAAL
>Mature_201_residues
MNSHIAAVDLKKAYRLINHGPTVLVSAHHDGVDNVMAAAWACALDFSPPKLTVVLDKAAKTRELIEQSGRFVIQVPTAAQ
LQLTQEVGSHSLASRPDKLRRAGVELFSIDGHDAPFVAGCSAWLACTLVREPHNQQAYDLFIGEVDAAWSDTRAFKNGRW
QFEQADPAWRSLHHVAGGHFYAIGEALSAREADRHDAEAAL

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavoredoxin family [H]

Homologues:

Organism=Escherichia coli, GI87081916, Length=190, Percent_Identity=38.4210526315789, Blast_Score=129, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: NA

Molecular weight: Translated: 21970; Mature: 21970

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSHIAAVDLKKAYRLINHGPTVLVSAHHDGVDNVMAAAWACALDFSPPKLTVVLDKAAK
CCCCEEEEEHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHEECCCCCEEEEEECCCHH
TRELIEQSGRFVIQVPTAAQLQLTQEVGSHSLASRPDKLRRAGVELFSIDGHDAPFVAGC
HHHHHHHCCCEEEEECCCHHHHHHHHHCCCCHHCCCHHHHHCCCEEEEECCCCCCHHHHH
SAWLACTLVREPHNQQAYDLFIGEVDAAWSDTRAFKNGRWQFEQADPAWRSLHHVAGGHF
HHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHCCCCEEECCCCHHHHHHHHHCCCEE
YAIGEALSAREADRHDAEAAL
EEHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNSHIAAVDLKKAYRLINHGPTVLVSAHHDGVDNVMAAAWACALDFSPPKLTVVLDKAAK
CCCCEEEEEHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHEECCCCCEEEEEECCCHH
TRELIEQSGRFVIQVPTAAQLQLTQEVGSHSLASRPDKLRRAGVELFSIDGHDAPFVAGC
HHHHHHHCCCEEEEECCCHHHHHHHHHCCCCHHCCCHHHHHCCCEEEEECCCCCCHHHHH
SAWLACTLVREPHNQQAYDLFIGEVDAAWSDTRAFKNGRWQFEQADPAWRSLHHVAGGHF
HHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHCCCCEEECCCCHHHHHHHHHCCCEE
YAIGEALSAREADRHDAEAAL
EEHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]