Definition Anabaena variabilis ATCC 29413 chromosome, complete genome.
Accession NC_007413
Length 6,365,727

Click here to switch to the map view.

The map label for this gene is 75909948

Identifier: 75909948

GI number: 75909948

Start: 4659756

End: 4660646

Strand: Direct

Name: 75909948

Synonym: Ava_3744

Alternate gene names: NA

Gene position: 4659756-4660646 (Clockwise)

Preceding gene: 75909947

Following gene: 75909950

Centisome position: 73.2

GC content: 39.06

Gene sequence:

>891_bases
ATGGCAGAACCAATTCGCATTCTTTTACAAACAACGATCGCCTCAACTGAAGATGACTGGAGTATCTTTCGTTTTTCTCT
ATTGCAGAATTATTTAAAATCTATTCAAGATGAATCAGGAAAACCATTATTTACAGTTTTATCACGCGATCGTTCCTCTG
ATGCCGACGGGAATGACCCTATTTTAGGGACACTAGACCAGTCAGATTTTGATGAACTCTGGCTATTTGCTCTAGATACT
GGTGATGGTTTAACAGACAAAGATATTGCTGGAATTAACGCTTTTAGAAAACGGGGTGGTGGAATTCTCACAACACGAGA
CCATCAAGATATGGGCTGCTCTATGTGCGGTTTAATTGATATTGGTGATGTTCATTATTTTAATACCAAAAATCCCGACC
CCGACGATTCGCGTTGGAGTCGTGATGATCCACATACAACCTATATTTCCTGGCCTAACTACCATTCTGGAGCTAATGGA
GACTATCAAAAAATCATTCCTGTAGAACCAGTCCATGAACTCTTACATAACCCTAATTCACCTTCTGGGTTAATTGAATT
TTTCCCGTCTCATCCCCATGAAGGTGGTATTGGAGTCAACCCAAATAATTTAAATTCCCAAGTAATTGCATTAGGAAAAA
GTCTAGTTACTCATCGCAACTTTAACTTAATTGTTGCAACGGAACACCATACAGATACAGAAAAAAATCGACTGGGTAGG
GCAATAGCTACTTCCAGTTTTCATCATTTTGTTGATTACAATTGGGACATAGAAAAAGGTTGTCCTTCTTTTGTTGATGA
ACCGCCAGGAAATGGCATGAAATTAGAACCTCGTGCTTTAGAAGATATTCAAGCTTTTGTGCGTAATGCAGCTTTGTGGC
TAGCCAGATAA

Upstream 100 bases:

>100_bases
TATTTAGTCATCTTTTGGTATTTGGTGGAAATTTGTTGTAGATTAATGCAAGTATTCATCGCCATGAGTATATTGGTACA
AAAATTTACTATAAAAATTT

Downstream 100 bases:

>100_bases
GTTTTTATTAAGCTCCGCGTGTCAGTTGTTGAAAGTATCTGGTCTAATACCCCAACCCCTTGTGGGTGGTTTCTACATAT
CTTTGCTACTGACTACTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MAEPIRILLQTTIASTEDDWSIFRFSLLQNYLKSIQDESGKPLFTVLSRDRSSDADGNDPILGTLDQSDFDELWLFALDT
GDGLTDKDIAGINAFRKRGGGILTTRDHQDMGCSMCGLIDIGDVHYFNTKNPDPDDSRWSRDDPHTTYISWPNYHSGANG
DYQKIIPVEPVHELLHNPNSPSGLIEFFPSHPHEGGIGVNPNNLNSQVIALGKSLVTHRNFNLIVATEHHTDTEKNRLGR
AIATSSFHHFVDYNWDIEKGCPSFVDEPPGNGMKLEPRALEDIQAFVRNAALWLAR

Sequences:

>Translated_296_residues
MAEPIRILLQTTIASTEDDWSIFRFSLLQNYLKSIQDESGKPLFTVLSRDRSSDADGNDPILGTLDQSDFDELWLFALDT
GDGLTDKDIAGINAFRKRGGGILTTRDHQDMGCSMCGLIDIGDVHYFNTKNPDPDDSRWSRDDPHTTYISWPNYHSGANG
DYQKIIPVEPVHELLHNPNSPSGLIEFFPSHPHEGGIGVNPNNLNSQVIALGKSLVTHRNFNLIVATEHHTDTEKNRLGR
AIATSSFHHFVDYNWDIEKGCPSFVDEPPGNGMKLEPRALEDIQAFVRNAALWLAR
>Mature_295_residues
AEPIRILLQTTIASTEDDWSIFRFSLLQNYLKSIQDESGKPLFTVLSRDRSSDADGNDPILGTLDQSDFDELWLFALDTG
DGLTDKDIAGINAFRKRGGGILTTRDHQDMGCSMCGLIDIGDVHYFNTKNPDPDDSRWSRDDPHTTYISWPNYHSGANGD
YQKIIPVEPVHELLHNPNSPSGLIEFFPSHPHEGGIGVNPNNLNSQVIALGKSLVTHRNFNLIVATEHHTDTEKNRLGRA
IATSSFHHFVDYNWDIEKGCPSFVDEPPGNGMKLEPRALEDIQAFVRNAALWLAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33109; Mature: 32978

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEPIRILLQTTIASTEDDWSIFRFSLLQNYLKSIQDESGKPLFTVLSRDRSSDADGNDP
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCC
ILGTLDQSDFDELWLFALDTGDGLTDKDIAGINAFRKRGGGILTTRDHQDMGCSMCGLID
EEEECCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCEECEEE
IGDVHYFNTKNPDPDDSRWSRDDPHTTYISWPNYHSGANGDYQKIIPVEPVHELLHNPNS
ECCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEECCCHHHHHHHCCCCC
PSGLIEFFPSHPHEGGIGVNPNNLNSQVIALGKSLVTHRNFNLIVATEHHTDTEKNRLGR
CCHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHH
AIATSSFHHFVDYNWDIEKGCPSFVDEPPGNGMKLEPRALEDIQAFVRNAALWLAR
HHHHCCHHHHCCCCCCHHCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AEPIRILLQTTIASTEDDWSIFRFSLLQNYLKSIQDESGKPLFTVLSRDRSSDADGNDP
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCC
ILGTLDQSDFDELWLFALDTGDGLTDKDIAGINAFRKRGGGILTTRDHQDMGCSMCGLID
EEEECCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCEECEEE
IGDVHYFNTKNPDPDDSRWSRDDPHTTYISWPNYHSGANGDYQKIIPVEPVHELLHNPNS
ECCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEECCCHHHHHHHCCCCC
PSGLIEFFPSHPHEGGIGVNPNNLNSQVIALGKSLVTHRNFNLIVATEHHTDTEKNRLGR
CCHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHH
AIATSSFHHFVDYNWDIEKGCPSFVDEPPGNGMKLEPRALEDIQAFVRNAALWLAR
HHHHCCHHHHCCCCCCHHCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA