Definition Anabaena variabilis ATCC 29413 chromosome, complete genome.
Accession NC_007413
Length 6,365,727

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The map label for this gene is 75909947

Identifier: 75909947

GI number: 75909947

Start: 4659090

End: 4659638

Strand: Direct

Name: 75909947

Synonym: Ava_3743

Alternate gene names: NA

Gene position: 4659090-4659638 (Clockwise)

Preceding gene: 75909946

Following gene: 75909948

Centisome position: 73.19

GC content: 32.6

Gene sequence:

>549_bases
ATGAGTTCATTGGATATATCTTTAGTGAATCACATTGACTTCATCAAAAACTATATGCGTTTATTTACTACTATTGGCTT
GGGATTTCTTCTATCTTTGAGCGTGAATCTGCCAGCTATGTCTGAATCAATAGTGCAGATAGAACTATTATCAGCACGTC
CCAACTTAAATTCAAGGCAATTAATTTTTAATCGCAGATTGTGGAATAGCAAAAATATTTCTAACTATCGATATACTTTG
AGTAATAGCTGTTTTTGTATACCTGAAGCTAGAGGGCCAGTAGTCATTGAAGTCCGCAATGGTCAGACAACTTCCATTAC
TGCTGTGAATCCTGGGCAAGCAGTTAATCCACAATTTTTTCAAAAATACAATACAATTCCTAAACTTTTTAACGTGATTC
AAAATGCTATTCAAAGTCAAGCATCTAGTTTAGATATCAGTTACAACCATAAATTTGGTTATCCCACTCAAATTAATATT
GATTACAACAGTCAAATAGCTGATGAAGAATTATTTCTCACAATTGAGAATTTTGAAGTAATTCCATAA

Upstream 100 bases:

>100_bases
AACAGGAACCCCGAAGTTTTTAAATCGGGGTTTTGCATGAGTTTTAATCAAAAAATAAATTAAATTTAAACAATTTATTC
AAAAATATAGTTGTACTCCC

Downstream 100 bases:

>100_bases
GTGTGAGGATTTGTGCGTATTTAGTCATCTTTTGGTATTTGGTGGAAATTTGTTGTAGATTAATGCAAGTATTCATCGCC
ATGAGTATATTGGTACAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MSSLDISLVNHIDFIKNYMRLFTTIGLGFLLSLSVNLPAMSESIVQIELLSARPNLNSRQLIFNRRLWNSKNISNYRYTL
SNSCFCIPEARGPVVIEVRNGQTTSITAVNPGQAVNPQFFQKYNTIPKLFNVIQNAIQSQASSLDISYNHKFGYPTQINI
DYNSQIADEELFLTIENFEVIP

Sequences:

>Translated_182_residues
MSSLDISLVNHIDFIKNYMRLFTTIGLGFLLSLSVNLPAMSESIVQIELLSARPNLNSRQLIFNRRLWNSKNISNYRYTL
SNSCFCIPEARGPVVIEVRNGQTTSITAVNPGQAVNPQFFQKYNTIPKLFNVIQNAIQSQASSLDISYNHKFGYPTQINI
DYNSQIADEELFLTIENFEVIP
>Mature_181_residues
SSLDISLVNHIDFIKNYMRLFTTIGLGFLLSLSVNLPAMSESIVQIELLSARPNLNSRQLIFNRRLWNSKNISNYRYTLS
NSCFCIPEARGPVVIEVRNGQTTSITAVNPGQAVNPQFFQKYNTIPKLFNVIQNAIQSQASSLDISYNHKFGYPTQINID
YNSQIADEELFLTIENFEVIP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20671; Mature: 20540

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLDISLVNHIDFIKNYMRLFTTIGLGFLLSLSVNLPAMSESIVQIELLSARPNLNSRQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEEEEEEECCCCCCCCE
LIFNRRLWNSKNISNYRYTLSNSCFCIPEARGPVVIEVRNGQTTSITAVNPGQAVNPQFF
EEEEECCCCCCCCCCEEEEECCCEEEEECCCCCEEEEECCCCEEEEEEECCCCCCCHHHH
QKYNTIPKLFNVIQNAIQSQASSLDISYNHKFGYPTQINIDYNSQIADEELFLTIENFEV
HHHCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEEECCCCCCCCCEEEEEEECEEE
IP
CC
>Mature Secondary Structure 
SSLDISLVNHIDFIKNYMRLFTTIGLGFLLSLSVNLPAMSESIVQIELLSARPNLNSRQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEEEEEEECCCCCCCCE
LIFNRRLWNSKNISNYRYTLSNSCFCIPEARGPVVIEVRNGQTTSITAVNPGQAVNPQFF
EEEEECCCCCCCCCCEEEEECCCEEEEECCCCCEEEEECCCCEEEEEEECCCCCCCHHHH
QKYNTIPKLFNVIQNAIQSQASSLDISYNHKFGYPTQINIDYNSQIADEELFLTIENFEV
HHHCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEEECCCCCCCCCEEEEEEECEEE
IP
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA