| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is kch [C]
Identifier: 75909935
GI number: 75909935
Start: 4642256
End: 4643272
Strand: Direct
Name: kch [C]
Synonym: Ava_3731
Alternate gene names: 75909935
Gene position: 4642256-4643272 (Clockwise)
Preceding gene: 75909932
Following gene: 75909938
Centisome position: 72.93
GC content: 47.59
Gene sequence:
>1017_bases ATGGCCGGGGCGATCGCTCTCGGTGGTGTATTAATTCTCGGTACTTTGTGGTATCGGTTTGTCGAGGGTTGGTCATGGGA AGATGCAGCTTACATGACAGTTATTACCTTAGCTACCGTAGGATATGGTGAAACCAACCCCCTTGGTAGTCGTGGACGCT TATTTACTATTGCCTTAATTTTGCTAGGTGTAATCAATCTTGGCTACATTGTCAACAGGTTTACAGAAGCAGTTATTCAG GGTTACTTTCAACAAGGTATTCGGCTCAGACAACAGAGGCGCTTAATGGAATCCTTATCAGAACACTACATCATTTGTGG ATTCAGTCGGACTGGTCGCCAAATTGCCAAGGAATTTCGGGCGGAAGGTGTAACATTTGTGGTGATCGATTCTGATGCTG ATTCGATAGAAAGAGCGCAAGCCGAGGGGCATACAGCATTTCAAGGAGATGCTACACTTGATGATACTCTCCTGAGAGTT GGGATTGAGAGGGCAATTTGTTTAGTTGCGGCTCTCCCTTCTGATGCAGAGAATTTATACACGGTTTTATCAGCAAAAAC TCTGAATCCCCGCATTAGAGCGATCGCACGAGCCAGCACAGAAGAAGCTCTGCAAAAATTACAGCGAGGCGGTGCAGATG CCGTCATTTCCCCATATATCACGGGTGGTAAGCGGATGGCGGCCGCCGCCCTCAGACCGCAAGTATTAGACTTTGTAGAC GGGATTCTCACAGGTGCAGACCGTCAACTGTACATGGAAGAATTTTTACTCGACCCGGCCTTATGTCCCTTTGTTGGTCA AAGCTTGCAAAAAGCCAAACTGCGATCGCAAAGTGGGGCATTAGTCCTGGCTATTCGTCGCATAGATGGTATGCTCATCG GCGGCCCCACAGGAGATACAGTGTTAATGCCAGGAGACACGCTGATTTGCATGGGTACAGCCGACCAACTGCGTACCCTC AACCAAATTCTCGGCCCAATTGGTTCTCAGCAATTACGTAAACCTAAGAATATTTAA
Upstream 100 bases:
>100_bases TTGAGCTTAACATTATATATCCTCAAACCTGTGGCAATAGTGGAAAATAATTTTGTATTCAACTCTTGAACAGAAATACC AACGCATCCAAAAAGAGTTA
Downstream 100 bases:
>100_bases AAGGGTGTAAGGGAGAAGAAATTTATCTTTATTTTCTTCCCCTAAACCCCTATAGCGATTTCCAGTTAAGTGAGGTACAG ATAATATTTTGAAACGCAGA
Product: hypothetical protein
Products: K (I) [Cytoplasm] [C]
Alternate protein names: MjK1 [H]
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MAGAIALGGVLILGTLWYRFVEGWSWEDAAYMTVITLATVGYGETNPLGSRGRLFTIALILLGVINLGYIVNRFTEAVIQ GYFQQGIRLRQQRRLMESLSEHYIICGFSRTGRQIAKEFRAEGVTFVVIDSDADSIERAQAEGHTAFQGDATLDDTLLRV GIERAICLVAALPSDAENLYTVLSAKTLNPRIRAIARASTEEALQKLQRGGADAVISPYITGGKRMAAAALRPQVLDFVD GILTGADRQLYMEEFLLDPALCPFVGQSLQKAKLRSQSGALVLAIRRIDGMLIGGPTGDTVLMPGDTLICMGTADQLRTL NQILGPIGSQQLRKPKNI
Sequences:
>Translated_338_residues MAGAIALGGVLILGTLWYRFVEGWSWEDAAYMTVITLATVGYGETNPLGSRGRLFTIALILLGVINLGYIVNRFTEAVIQ GYFQQGIRLRQQRRLMESLSEHYIICGFSRTGRQIAKEFRAEGVTFVVIDSDADSIERAQAEGHTAFQGDATLDDTLLRV GIERAICLVAALPSDAENLYTVLSAKTLNPRIRAIARASTEEALQKLQRGGADAVISPYITGGKRMAAAALRPQVLDFVD GILTGADRQLYMEEFLLDPALCPFVGQSLQKAKLRSQSGALVLAIRRIDGMLIGGPTGDTVLMPGDTLICMGTADQLRTL NQILGPIGSQQLRKPKNI >Mature_337_residues AGAIALGGVLILGTLWYRFVEGWSWEDAAYMTVITLATVGYGETNPLGSRGRLFTIALILLGVINLGYIVNRFTEAVIQG YFQQGIRLRQQRRLMESLSEHYIICGFSRTGRQIAKEFRAEGVTFVVIDSDADSIERAQAEGHTAFQGDATLDDTLLRVG IERAICLVAALPSDAENLYTVLSAKTLNPRIRAIARASTEEALQKLQRGGADAVISPYITGGKRMAAAALRPQVLDFVDG ILTGADRQLYMEEFLLDPALCPFVGQSLQKAKLRSQSGALVLAIRRIDGMLIGGPTGDTVLMPGDTLICMGTADQLRTLN QILGPIGSQQLRKPKNI
Specific function: Potassium channel protein. Seems to conduct potassium at low membrane potentials [H]
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1787503, Length=203, Percent_Identity=25.615763546798, Blast_Score=87, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013099 - InterPro: IPR003280 - InterPro: IPR016040 - InterPro: IPR006037 - InterPro: IPR003148 [H]
Pfam domain/function: PF07885 Ion_trans_2; PF02080 TrkA_C; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 36702; Mature: 36571
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGAIALGGVLILGTLWYRFVEGWSWEDAAYMTVITLATVGYGETNPLGSRGRLFTIALI CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH LLGVINLGYIVNRFTEAVIQGYFQQGIRLRQQRRLMESLSEHYIICGFSRTGRQIAKEFR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHH AEGVTFVVIDSDADSIERAQAEGHTAFQGDATLDDTLLRVGIERAICLVAALPSDAENLY HCCCEEEEECCCCHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH TVLSAKTLNPRIRAIARASTEEALQKLQRGGADAVISPYITGGKRMAAAALRPQVLDFVD HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHH GILTGADRQLYMEEFLLDPALCPFVGQSLQKAKLRSQSGALVLAIRRIDGMLIGGPTGDT HHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEHHCCEEEECCCCCE VLMPGDTLICMGTADQLRTLNQILGPIGSQQLRKPKNI EEECCCEEEEECCHHHHHHHHHHHCCCCHHHHCCCCCC >Mature Secondary Structure AGAIALGGVLILGTLWYRFVEGWSWEDAAYMTVITLATVGYGETNPLGSRGRLFTIALI CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH LLGVINLGYIVNRFTEAVIQGYFQQGIRLRQQRRLMESLSEHYIICGFSRTGRQIAKEFR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHH AEGVTFVVIDSDADSIERAQAEGHTAFQGDATLDDTLLRVGIERAICLVAALPSDAENLY HCCCEEEEECCCCHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH TVLSAKTLNPRIRAIARASTEEALQKLQRGGADAVISPYITGGKRMAAAALRPQVLDFVD HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHH GILTGADRQLYMEEFLLDPALCPFVGQSLQKAKLRSQSGALVLAIRRIDGMLIGGPTGDT HHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEHHCCEEEECCCCCE VLMPGDTLICMGTADQLRTLNQILGPIGSQQLRKPKNI EEECCCEEEEECCHHHHHHHHHHHCCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: K (I) [Periplasm] [C]
Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]