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The map label for this gene is yjbQ [C]

Identifier: 75909901

GI number: 75909901

Start: 4606359

End: 4606796

Strand: Direct

Name: yjbQ [C]

Synonym: Ava_3696

Alternate gene names: 75909901

Gene position: 4606359-4606796 (Clockwise)

Preceding gene: 75909900

Following gene: 75909902

Centisome position: 72.36

GC content: 33.56

Gene sequence:

>438_bases
ATGTCCATATTCAATAAAATCATCGAAATAGAAACAGAACCAGGAATTAATATTTACAACATCACAAACTATCTCAAGGA
TTTTTTAGCTACTACTGCCATTCAAAATGGGCAAATTTTAGTATTTTCACAACATACAACTACAGCTTTAGCTATTAATG
AAGATGAAGTGAGATTATTAGAAGATATAAAAGTATTCTTGCGAAAAATAGCACCTGAATCAGAACGTTACCTGCACAAT
GATTTACATTTAAGAGTTGTGCCAGAAGATGAACCAATGAATGCTCATTCTCATTTGATGGCAATGATGTTAACAACTAG
CGAAGTTGTCCCCGTAATAGAGGGAAAATTAGCTTTAGGAACTTGGCAATCTGTATTGTTTTTCGATTTAGATGGCCCCC
GTAAAAGAAATGTGTTGCTACAAATTTCTGGGGAATAA

Upstream 100 bases:

>100_bases
TAAAGCTACTATGATTTGCTAATTTTTCAGTCATGATAAATTTGCACTACTGATTTTTGATTTTTTGCCAATAAATTGGG
TATTTAATATTAAGTTTGTT

Downstream 100 bases:

>100_bases
CTCCACGGACAAATCATTTAATACATGGGTGAGAAATATACAAAAAAAATAGTACTTAAGTACTGTTTTTAGGGCTGTTG
GTGTGGAAATACATGACTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MSIFNKIIEIETEPGINIYNITNYLKDFLATTAIQNGQILVFSQHTTTALAINEDEVRLLEDIKVFLRKIAPESERYLHN
DLHLRVVPEDEPMNAHSHLMAMMLTTSEVVPVIEGKLALGTWQSVLFFDLDGPRKRNVLLQISGE

Sequences:

>Translated_145_residues
MSIFNKIIEIETEPGINIYNITNYLKDFLATTAIQNGQILVFSQHTTTALAINEDEVRLLEDIKVFLRKIAPESERYLHN
DLHLRVVPEDEPMNAHSHLMAMMLTTSEVVPVIEGKLALGTWQSVLFFDLDGPRKRNVLLQISGE
>Mature_144_residues
SIFNKIIEIETEPGINIYNITNYLKDFLATTAIQNGQILVFSQHTTTALAINEDEVRLLEDIKVFLRKIAPESERYLHND
LHLRVVPEDEPMNAHSHLMAMMLTTSEVVPVIEGKLALGTWQSVLFFDLDGPRKRNVLLQISGE

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 16503; Mature: 16372

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS01314 UPF0047

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIFNKIIEIETEPGINIYNITNYLKDFLATTAIQNGQILVFSQHTTTALAINEDEVRLL
CCCHHEEEEEECCCCCEEEHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCHHHHHH
EDIKVFLRKIAPESERYLHNDLHLRVVPEDEPMNAHSHLMAMMLTTSEVVPVIEGKLALG
HHHHHHHHHHCCCCHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHCCEEEEC
TWQSVLFFDLDGPRKRNVLLQISGE
CCCEEEEEECCCCCCCCEEEEEECC
>Mature Secondary Structure 
SIFNKIIEIETEPGINIYNITNYLKDFLATTAIQNGQILVFSQHTTTALAINEDEVRLL
CCHHEEEEEECCCCCEEEHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCHHHHHH
EDIKVFLRKIAPESERYLHNDLHLRVVPEDEPMNAHSHLMAMMLTTSEVVPVIEGKLALG
HHHHHHHHHHCCCCHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHCCEEEEC
TWQSVLFFDLDGPRKRNVLLQISGE
CCCEEEEEECCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]