Definition Anabaena variabilis ATCC 29413 chromosome, complete genome.
Accession NC_007413
Length 6,365,727

Click here to switch to the map view.

The map label for this gene is 75909771

Identifier: 75909771

GI number: 75909771

Start: 4440548

End: 4441630

Strand: Direct

Name: 75909771

Synonym: Ava_3566

Alternate gene names: NA

Gene position: 4440548-4441630 (Clockwise)

Preceding gene: 75909769

Following gene: 75909777

Centisome position: 69.76

GC content: 41.09

Gene sequence:

>1083_bases
GTGAGTCTGGATTTGTCTACTCCATTGCAATTAATTGGGCGTTCAGTGGAGTTTCAGCGCGTTGTAGAAGTGCTGGCCCA
GGATGGTGACTTGTTAATTACGGGAGTACCGGGTAGTGGTAGGCGTACTCTAGTGCGGTGGGGCGTGACAGAAGTGAGAG
CGATCGCTCTAGATATTGACTGCATCCGCGCCACAGATGGAGAGCGATTTTTACAGTTACTCACAGAAGCAATTAACCAA
AATTGGCAAGCAGAAAAAATCCAAAGTTGGTTAGATAAAAATGCCAAGGAATTTTTTACATTTCATCCAGAAACTAAACT
TAAGCTATTACGTTCTCTCAGCCAAAAACAAATTTGGCAAGCCTTTGAACTATTGTTGGAATTGCCGCAAATTATGGCAG
TAGATTTAAACAAACGTTTAGTCTTAATTCTGCAAAGTTTCCCCCACATTCGCTCTTGGGATCGTAACGGTTTATGGGAA
ATATCATTCCGGCGGAAAATCAAAGAACACACTCATGTAAGTTATGTGCTGATTGCCACGATCGCCGAGACGGGAAATTA
TTCAGACGAAAATAATTATCCTTTAGAAACCATCCAATTACCTCCCTTGAACCGAGATGTATTGGCAGTATGGGCGAGGG
AAATATTACATGGTTCAAAACTCACATTTGATTCCCGTTCTAAAGCATTACAACTATTTTTAGATGCCGTACAAGGTCAT
ATTGGCGATGCGATGGCAATAATTCGCCGTCTACAAACTTTATGTGTTCCTGATAGCTTAGTTACAGAAAATGATGTCCA
GCAAGCCATTGAAGGATTACTCAAAGATTTATCAATGACCTATGAATCTTTATTGATGTTGCTACCAGCCAATCAGGTAC
ATCTTTTGGAATGTTTAGCTTTAGACCCCACAGAAAAACCCCAAAGCAAAGACTATATTCAAAAACACGGTCTTTCTAGG
GGTGGTAGTCTCCAAGGTGCGCTGACAGGGTTACATCACAAGGGTTTAATTTATGGTGCAGAACAAGGTTATTTATTAGC
AATGCCATTGTTAGCTTTGTGGTTGCGCCAAAGATTGAGTTAG

Upstream 100 bases:

>100_bases
CTCCGCTTCGGGGAGAGGTTTGGAGAGGGGTCTTTATTATCATTCATAACTTTTCAAACATCCTCTTAGAGTTAGGATTA
AACCTGAAGGTGTAAAACTT

Downstream 100 bases:

>100_bases
TGATTCCCAGATTAAGCTGATTGTAAACTCAAGGCCTCGAACTGTTGCCAACACAGATACAAAGCACGGGGTACATGAAA
ACATCCCTTCCATTTACCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MSLDLSTPLQLIGRSVEFQRVVEVLAQDGDLLITGVPGSGRRTLVRWGVTEVRAIALDIDCIRATDGERFLQLLTEAINQ
NWQAEKIQSWLDKNAKEFFTFHPETKLKLLRSLSQKQIWQAFELLLELPQIMAVDLNKRLVLILQSFPHIRSWDRNGLWE
ISFRRKIKEHTHVSYVLIATIAETGNYSDENNYPLETIQLPPLNRDVLAVWAREILHGSKLTFDSRSKALQLFLDAVQGH
IGDAMAIIRRLQTLCVPDSLVTENDVQQAIEGLLKDLSMTYESLLMLLPANQVHLLECLALDPTEKPQSKDYIQKHGLSR
GGSLQGALTGLHHKGLIYGAEQGYLLAMPLLALWLRQRLS

Sequences:

>Translated_360_residues
MSLDLSTPLQLIGRSVEFQRVVEVLAQDGDLLITGVPGSGRRTLVRWGVTEVRAIALDIDCIRATDGERFLQLLTEAINQ
NWQAEKIQSWLDKNAKEFFTFHPETKLKLLRSLSQKQIWQAFELLLELPQIMAVDLNKRLVLILQSFPHIRSWDRNGLWE
ISFRRKIKEHTHVSYVLIATIAETGNYSDENNYPLETIQLPPLNRDVLAVWAREILHGSKLTFDSRSKALQLFLDAVQGH
IGDAMAIIRRLQTLCVPDSLVTENDVQQAIEGLLKDLSMTYESLLMLLPANQVHLLECLALDPTEKPQSKDYIQKHGLSR
GGSLQGALTGLHHKGLIYGAEQGYLLAMPLLALWLRQRLS
>Mature_359_residues
SLDLSTPLQLIGRSVEFQRVVEVLAQDGDLLITGVPGSGRRTLVRWGVTEVRAIALDIDCIRATDGERFLQLLTEAINQN
WQAEKIQSWLDKNAKEFFTFHPETKLKLLRSLSQKQIWQAFELLLELPQIMAVDLNKRLVLILQSFPHIRSWDRNGLWEI
SFRRKIKEHTHVSYVLIATIAETGNYSDENNYPLETIQLPPLNRDVLAVWAREILHGSKLTFDSRSKALQLFLDAVQGHI
GDAMAIIRRLQTLCVPDSLVTENDVQQAIEGLLKDLSMTYESLLMLLPANQVHLLECLALDPTEKPQSKDYIQKHGLSRG
GSLQGALTGLHHKGLIYGAEQGYLLAMPLLALWLRQRLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40839; Mature: 40708

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLDLSTPLQLIGRSVEFQRVVEVLAQDGDLLITGVPGSGRRTLVRWGVTEVRAIALDID
CCCCCCCCHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCCCCEEEECCHHHHHHHEEEEH
CIRATDGERFLQLLTEAINQNWQAEKIQSWLDKNAKEFFTFHPETKLKLLRSLSQKQIWQ
HEECCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHEEECCHHHHHHHHHHHHHHHHH
AFELLLELPQIMAVDLNKRLVLILQSFPHIRSWDRNGLWEISFRRKIKEHTHVSYVLIAT
HHHHHHHHHHHHHHCCCCCEEHHHHHCCCHHCCCCCCCEEEHHHHHHHHHCCHHHHHEEE
IAETGNYSDENNYPLETIQLPPLNRDVLAVWAREILHGSKLTFDSRSKALQLFLDAVQGH
HHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
IGDAMAIIRRLQTLCVPDSLVTENDVQQAIEGLLKDLSMTYESLLMLLPANQVHLLECLA
HHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
LDPTEKPQSKDYIQKHGLSRGGSLQGALTGLHHKGLIYGAEQGYLLAMPLLALWLRQRLS
CCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLDLSTPLQLIGRSVEFQRVVEVLAQDGDLLITGVPGSGRRTLVRWGVTEVRAIALDID
CCCCCCCHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCCCCEEEECCHHHHHHHEEEEH
CIRATDGERFLQLLTEAINQNWQAEKIQSWLDKNAKEFFTFHPETKLKLLRSLSQKQIWQ
HEECCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHEEECCHHHHHHHHHHHHHHHHH
AFELLLELPQIMAVDLNKRLVLILQSFPHIRSWDRNGLWEISFRRKIKEHTHVSYVLIAT
HHHHHHHHHHHHHHCCCCCEEHHHHHCCCHHCCCCCCCEEEHHHHHHHHHCCHHHHHEEE
IAETGNYSDENNYPLETIQLPPLNRDVLAVWAREILHGSKLTFDSRSKALQLFLDAVQGH
HHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
IGDAMAIIRRLQTLCVPDSLVTENDVQQAIEGLLKDLSMTYESLLMLLPANQVHLLECLA
HHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
LDPTEKPQSKDYIQKHGLSRGGSLQGALTGLHHKGLIYGAEQGYLLAMPLLALWLRQRLS
CCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA