Definition Anabaena variabilis ATCC 29413 chromosome, complete genome.
Accession NC_007413
Length 6,365,727

Click here to switch to the map view.

The map label for this gene is 75909743

Identifier: 75909743

GI number: 75909743

Start: 4403098

End: 4403655

Strand: Direct

Name: 75909743

Synonym: Ava_3537

Alternate gene names: NA

Gene position: 4403098-4403655 (Clockwise)

Preceding gene: 75909738

Following gene: 75909745

Centisome position: 69.17

GC content: 41.58

Gene sequence:

>558_bases
ATGCGCTTAAATTTTATAGATAGCAAACAAGCAATTTCTGTAAATTCTGCCGTTTCCAAATTTGCCAGAGGTACATTAAA
TTTAACTCTTGCAGCCGGACTCGCTTCTCTTCCTAGCATCAGTAATGCTCAGACAGTAGTACCTAATCAACTACAGGGCG
AATGGTCTTATGGTCGGATTTCATCTATCCAATACCAAGACCGCTATACAGGACAGTCAGCACAACCAAATGGTTCTAGC
GATCGCTTTAAGGTAGCACCTAATGGTAATTATGAGCGTGCTAGATTACTCCAAATTAACACTTATGGTTGCGCTTCGTA
CCTATTTATTCAAGAAAAGGGCAAAGTCAAAATAGATGGTCAACAATTGACTTTCAAGCCAAGTGAAAGTCTGGTCAAAG
GTCAGCAATGTAGTGCATCAAACACCTATCAACGACGCAATACAGCCAAGACAGAAACCTATAGCTGGTCTTTAGAGAGA
AACGAATATGGACAAGAAGTTATGGTACTTGAAACCCTGGATGGCAAGGGTAAAGCTCATTACGGCCGTCCCCAGTAG

Upstream 100 bases:

>100_bases
AAATTTCCTTGCATAAGTTTTCAAGTTTCAGCTGATGTGTTAACAGAGATATTTTCTGCTCACAAAGCTAATCCTGAAAA
ACATATACAAGTAAACTGAT

Downstream 100 bases:

>100_bases
CATCATAAGGTCTGATTGGTAATTATTTTCCCAATTACCAATTACCAAACCCCACAGAAATTATAACCACACAAACATAC
TAAATATAATCTTCACCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MRLNFIDSKQAISVNSAVSKFARGTLNLTLAAGLASLPSISNAQTVVPNQLQGEWSYGRISSIQYQDRYTGQSAQPNGSS
DRFKVAPNGNYERARLLQINTYGCASYLFIQEKGKVKIDGQQLTFKPSESLVKGQQCSASNTYQRRNTAKTETYSWSLER
NEYGQEVMVLETLDGKGKAHYGRPQ

Sequences:

>Translated_185_residues
MRLNFIDSKQAISVNSAVSKFARGTLNLTLAAGLASLPSISNAQTVVPNQLQGEWSYGRISSIQYQDRYTGQSAQPNGSS
DRFKVAPNGNYERARLLQINTYGCASYLFIQEKGKVKIDGQQLTFKPSESLVKGQQCSASNTYQRRNTAKTETYSWSLER
NEYGQEVMVLETLDGKGKAHYGRPQ
>Mature_185_residues
MRLNFIDSKQAISVNSAVSKFARGTLNLTLAAGLASLPSISNAQTVVPNQLQGEWSYGRISSIQYQDRYTGQSAQPNGSS
DRFKVAPNGNYERARLLQINTYGCASYLFIQEKGKVKIDGQQLTFKPSESLVKGQQCSASNTYQRRNTAKTETYSWSLER
NEYGQEVMVLETLDGKGKAHYGRPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20559; Mature: 20559

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLNFIDSKQAISVNSAVSKFARGTLNLTLAAGLASLPSISNAQTVVPNQLQGEWSYGRI
CCCCCCCCCCEEEHHHHHHHHHCCCEEEEEECCHHHCCCCCCCCEECCCCCCCCCCCCCE
SSIQYQDRYTGQSAQPNGSSDRFKVAPNGNYERARLLQINTYGCASYLFIQEKGKVKIDG
EEEEECCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCEEEEEEECCCCEEECC
QQLTFKPSESLVKGQQCSASNTYQRRNTAKTETYSWSLERNEYGQEVMVLETLDGKGKAH
CEEEECCCHHHHCCCCCCCCCCHHHCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCC
YGRPQ
CCCCC
>Mature Secondary Structure
MRLNFIDSKQAISVNSAVSKFARGTLNLTLAAGLASLPSISNAQTVVPNQLQGEWSYGRI
CCCCCCCCCCEEEHHHHHHHHHCCCEEEEEECCHHHCCCCCCCCEECCCCCCCCCCCCCE
SSIQYQDRYTGQSAQPNGSSDRFKVAPNGNYERARLLQINTYGCASYLFIQEKGKVKIDG
EEEEECCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCEEEEEEECCCCEEECC
QQLTFKPSESLVKGQQCSASNTYQRRNTAKTETYSWSLERNEYGQEVMVLETLDGKGKAH
CEEEECCCHHHHCCCCCCCCCCHHHCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCC
YGRPQ
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA