| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is mnmG
Identifier: 75909745
GI number: 75909745
Start: 4404865
End: 4406787
Strand: Direct
Name: mnmG
Synonym: Ava_3539
Alternate gene names: 75909745
Gene position: 4404865-4406787 (Clockwise)
Preceding gene: 75909743
Following gene: 75909746
Centisome position: 69.2
GC content: 48.1
Gene sequence:
>1923_bases ATGACCATGCACAATTCAGTGGAATTTCAAGACGCTTTTGATGTCATTGTCGTCGGTGCAGGTCACTCCGGTTGCGAAGC GGCGCTTGCTACTGCCCGCCTCGGCTGTCGTACCTTGTTACTGACGCTCAATTTGGATAAAATTGCGTGGCAACCCTGTA ATCCGGCTGTGGGTGGGCCTGCTAAATCCCAGTTGACCCATGAGGTAGATGCTTTGGGCGGGGAAATTGGCAAGATGGCA GACCGCACATATCTACAAAAGCGCATCCTCAACTCTTCACGAGGGCCTGCGGTGTGGGCATTACGCGCCCAAACTGACAA GCGGGAATATGCGGCTATCATGAAAAATATTGTGGAGAATCAAGAGAACTTGAGCATCCGCGAGAGTATGGTGACGGACT TGGTTCTGGGTGCTAATGATGAAGTGATAGGTGTGGAAACCTACTTTGGCGTAGCTTTCCAGTGTAAAGCCGTAATTTTA ACCACAGGTACATTTCTAGGTGGAAAAATTTGGGTAGGTAACAAATCCATGCCAGCCGGACGTGCTGGGGAGTTTGCGGC TGAGGGATTAACCGAAACCCTAAATCGTTTGGGATTTGAAACTGGTAGGTTAAAGACTGGTACACCCGCACGGGTAGATA AGCGGTCAGTAGATTACAGTAAGATGCAGCTCCAGCCAGGGGATGAGGAAGTGCGTTGGTTTAGTTTTGACCCGGATGTG TGGGTAGAACGGGAACAGCTACCTTGTCACATGACCCGCACCACCCCCGAAACTCATCGCCTGATTCGAGAAAACTTGCA CCTATCACCTGTGTATGGTGGTTGGGTAGAAGCCAAAGGCCCTCGTTATTGCCCCAGTATTGAAGATAAGATTGTCCGCT TTGTGGATAAAGAAAGTCATCAAATCTTTATTGAGCCGGAGGGACGGGATATTCCTGAATTATATATCCAAGGGTTTTCT ACAGGGTTGCCCGAAAATTTGCAACTACAGATGCTACGTAGTCTCCCTGGGTTGGAAAATTGCGTTATGTTACGTCCAGC TTATGCTGTGGAATATGACTACTTACCTGCAACTCAGTGTTACCCCACACTGATGACGAAGAAGGTTGCTGGCTTGTTTT GTGCGGGACAGGTGAATGGTACAACCGGTTATGAAGAAGCCGCAGCCCAAGGTATTGTAGCCGGAATTAATGCGGCGCGG TTTGTCCGGGATCAGGAAATGATAGTTTTTCCCCGTGAGCAAAGCTATTTAGGCACTTTAGTTGATGACCTATGTACAAA AGACCTCCGGGAACCTTATCGGATGCTTACCAGCCGTTCCGAATATCGCTTGCTGCTACGTTCTGATAACTCTGACCAGC GCCTAACTCCTCTAGGAAGGGAAATTGGCTTAATTGATGACCGTCGTTGGCAACTGTTTACCCGCAAACAGGAGCAGATT ACAGGTGAGAAAGAACGGCTGTATGCTACCAGAGTAAAAGAAAATGATGAAGTAGGCAAAGCGATCGCCTCTAATACCCA ACAAGCCATTAAAGGTTCAATCACCTTGGCTGACTTACTGCGTCGCCCTGGCTTCCATTATGTAGACCTCGATAGATACG GGTTAGGAAACCCCGAACTTACCCCAGCCGAAAGAGAAGGGGCAGAAATTGACATCAAATACTCTGGCTATCTTGCCAGA CAACAAAGCCAAATCGAACAGATTGCCCGTCAAGCACAGCGCCAATTACCAAGGGATTTGGATTACACAACTGTGGAAAC CCTCTCCAAAGAAGCGCGGGAAAAACTGAATAAGGTCAAACCCATGACCATTGGTCAAGCAGCCCGAATCGGTGGAGTCA ATCCAGCCGACATTAACGCCTTATTAATTTATTTAGAATTGCGTCAAACCAAGCACCAGACAGGATTAGCCGCTTTACCT TAA
Upstream 100 bases:
>100_bases CTGGGCAATGCTCACCCTATATATAATTCATAAATCAAATATTAGTCCTATAGATTAGGTTAGAATCAGGAATAAATCTC AGCTTGTTAATCCTGTACGT
Downstream 100 bases:
>100_bases CTTCATCTTTATCAAGGGTGAGTATAGTAGAGGGAGGGATGGGTATGATAGATGACAAGAATTCAGAACTGGCATCATCA ATTGATCCCCGCTTTTGAGT
Product: tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A
Number of amino acids: Translated: 640; Mature: 639
Protein sequence:
>640_residues MTMHNSVEFQDAFDVIVVGAGHSGCEAALATARLGCRTLLLTLNLDKIAWQPCNPAVGGPAKSQLTHEVDALGGEIGKMA DRTYLQKRILNSSRGPAVWALRAQTDKREYAAIMKNIVENQENLSIRESMVTDLVLGANDEVIGVETYFGVAFQCKAVIL TTGTFLGGKIWVGNKSMPAGRAGEFAAEGLTETLNRLGFETGRLKTGTPARVDKRSVDYSKMQLQPGDEEVRWFSFDPDV WVEREQLPCHMTRTTPETHRLIRENLHLSPVYGGWVEAKGPRYCPSIEDKIVRFVDKESHQIFIEPEGRDIPELYIQGFS TGLPENLQLQMLRSLPGLENCVMLRPAYAVEYDYLPATQCYPTLMTKKVAGLFCAGQVNGTTGYEEAAAQGIVAGINAAR FVRDQEMIVFPREQSYLGTLVDDLCTKDLREPYRMLTSRSEYRLLLRSDNSDQRLTPLGREIGLIDDRRWQLFTRKQEQI TGEKERLYATRVKENDEVGKAIASNTQQAIKGSITLADLLRRPGFHYVDLDRYGLGNPELTPAEREGAEIDIKYSGYLAR QQSQIEQIARQAQRQLPRDLDYTTVETLSKEAREKLNKVKPMTIGQAARIGGVNPADINALLIYLELRQTKHQTGLAALP
Sequences:
>Translated_640_residues MTMHNSVEFQDAFDVIVVGAGHSGCEAALATARLGCRTLLLTLNLDKIAWQPCNPAVGGPAKSQLTHEVDALGGEIGKMA DRTYLQKRILNSSRGPAVWALRAQTDKREYAAIMKNIVENQENLSIRESMVTDLVLGANDEVIGVETYFGVAFQCKAVIL TTGTFLGGKIWVGNKSMPAGRAGEFAAEGLTETLNRLGFETGRLKTGTPARVDKRSVDYSKMQLQPGDEEVRWFSFDPDV WVEREQLPCHMTRTTPETHRLIRENLHLSPVYGGWVEAKGPRYCPSIEDKIVRFVDKESHQIFIEPEGRDIPELYIQGFS TGLPENLQLQMLRSLPGLENCVMLRPAYAVEYDYLPATQCYPTLMTKKVAGLFCAGQVNGTTGYEEAAAQGIVAGINAAR FVRDQEMIVFPREQSYLGTLVDDLCTKDLREPYRMLTSRSEYRLLLRSDNSDQRLTPLGREIGLIDDRRWQLFTRKQEQI TGEKERLYATRVKENDEVGKAIASNTQQAIKGSITLADLLRRPGFHYVDLDRYGLGNPELTPAEREGAEIDIKYSGYLAR QQSQIEQIARQAQRQLPRDLDYTTVETLSKEAREKLNKVKPMTIGQAARIGGVNPADINALLIYLELRQTKHQTGLAALP >Mature_639_residues TMHNSVEFQDAFDVIVVGAGHSGCEAALATARLGCRTLLLTLNLDKIAWQPCNPAVGGPAKSQLTHEVDALGGEIGKMAD RTYLQKRILNSSRGPAVWALRAQTDKREYAAIMKNIVENQENLSIRESMVTDLVLGANDEVIGVETYFGVAFQCKAVILT TGTFLGGKIWVGNKSMPAGRAGEFAAEGLTETLNRLGFETGRLKTGTPARVDKRSVDYSKMQLQPGDEEVRWFSFDPDVW VEREQLPCHMTRTTPETHRLIRENLHLSPVYGGWVEAKGPRYCPSIEDKIVRFVDKESHQIFIEPEGRDIPELYIQGFST GLPENLQLQMLRSLPGLENCVMLRPAYAVEYDYLPATQCYPTLMTKKVAGLFCAGQVNGTTGYEEAAAQGIVAGINAARF VRDQEMIVFPREQSYLGTLVDDLCTKDLREPYRMLTSRSEYRLLLRSDNSDQRLTPLGREIGLIDDRRWQLFTRKQEQIT GEKERLYATRVKENDEVGKAIASNTQQAIKGSITLADLLRRPGFHYVDLDRYGLGNPELTPAEREGAEIDIKYSGYLARQ QSQIEQIARQAQRQLPRDLDYTTVETLSKEAREKLNKVKPMTIGQAARIGGVNPADINALLIYLELRQTKHQTGLAALP
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family
Homologues:
Organism=Homo sapiens, GI74024895, Length=644, Percent_Identity=41.6149068322981, Blast_Score=431, Evalue=1e-120, Organism=Homo sapiens, GI19882217, Length=669, Percent_Identity=40.0597907324365, Blast_Score=417, Evalue=1e-116, Organism=Homo sapiens, GI183227703, Length=684, Percent_Identity=39.1812865497076, Blast_Score=411, Evalue=1e-115, Organism=Escherichia coli, GI2367273, Length=619, Percent_Identity=49.2730210016155, Blast_Score=588, Evalue=1e-169, Organism=Caenorhabditis elegans, GI17534255, Length=623, Percent_Identity=39.4863563402889, Blast_Score=437, Evalue=1e-123, Organism=Saccharomyces cerevisiae, GI6321202, Length=647, Percent_Identity=42.3493044822257, Blast_Score=461, Evalue=1e-130, Organism=Drosophila melanogaster, GI24658174, Length=636, Percent_Identity=42.1383647798742, Blast_Score=441, Evalue=1e-124,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MNMG_ANAVT (Q3M790)
Other databases:
- EMBL: CP000117 - RefSeq: YP_324041.1 - HSSP: Q5SH33 - ProteinModelPortal: Q3M790 - SMR: Q3M790 - STRING: Q3M790 - GeneID: 3679563 - GenomeReviews: CP000117_GR - KEGG: ava:Ava_3539 - NMPDR: fig|240292.3.peg.4379 - eggNOG: COG0445 - HOGENOM: HBG284774 - OMA: GIQFRVL - PhylomeDB: Q3M790 - ProtClustDB: PRK05192 - BioCyc: AVAR240292:AVA_3539-MONOMER - GO: GO:0005737 - HAMAP: MF_00129 - InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 - TIGRFAMs: TIGR00136
Pfam domain/function: PF01134 GIDA
EC number: NA
Molecular weight: Translated: 71591; Mature: 71459
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: PS01280 GIDA_1; PS01281 GIDA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMHNSVEFQDAFDVIVVGAGHSGCEAALATARLGCRTLLLTLNLDKIAWQPCNPAVGGP CCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCEEEEEEEEHHHHCCCCCCCCCCCC AKSQLTHEVDALGGEIGKMADRTYLQKRILNSSRGPAVWALRAQTDKREYAAIMKNIVEN HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCC QENLSIRESMVTDLVLGANDEVIGVETYFGVAFQCKAVILTTGTFLGGKIWVGNKSMPAG CCCCHHHHHHHHHHHCCCCCCEEEEHHHHCEEEEEEEEEEEECCEECCEEEECCCCCCCC RAGEFAAEGLTETLNRLGFETGRLKTGTPARVDKRSVDYSKMQLQPGDEEVRWFSFDPDV CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCC WVEREQLPCHMTRTTPETHRLIRENLHLSPVYGGWVEAKGPRYCPSIEDKIVRFVDKESH EEECCCCCEEEECCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCC QIFIEPEGRDIPELYIQGFSTGLPENLQLQMLRSLPGLENCVMLRPAYAVEYDYLPATQC EEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCCCEEEECCCCEEEECCCCCHHH YPTLMTKKVAGLFCAGQVNGTTGYEEAAAQGIVAGINAARFVRDQEMIVFPREQSYLGTL HHHHHHHHHHCEEEECCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCEEEECCCHHHHHHH VDDLCTKDLREPYRMLTSRSEYRLLLRSDNSDQRLTPLGREIGLIDDRRWQLFTRKQEQI HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH TGEKERLYATRVKENDEVGKAIASNTQQAIKGSITLADLLRRPGFHYVDLDRYGLGNPEL CCCHHHHHHHHCCCCHHHHHHHHHCHHHHHHCCCHHHHHHHCCCCCEEECCCCCCCCCCC TPAEREGAEIDIKYSGYLARQQSQIEQIARQAQRQLPRDLDYTTVETLSKEAREKLNKVK CCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC PMTIGQAARIGGVNPADINALLIYLELRQTKHQTGLAALP CCCCCCHHHCCCCCCCCCEEEEEEEEHHHHHHHCCCCCCC >Mature Secondary Structure TMHNSVEFQDAFDVIVVGAGHSGCEAALATARLGCRTLLLTLNLDKIAWQPCNPAVGGP CCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCEEEEEEEEHHHHCCCCCCCCCCCC AKSQLTHEVDALGGEIGKMADRTYLQKRILNSSRGPAVWALRAQTDKREYAAIMKNIVEN HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCC QENLSIRESMVTDLVLGANDEVIGVETYFGVAFQCKAVILTTGTFLGGKIWVGNKSMPAG CCCCHHHHHHHHHHHCCCCCCEEEEHHHHCEEEEEEEEEEEECCEECCEEEECCCCCCCC RAGEFAAEGLTETLNRLGFETGRLKTGTPARVDKRSVDYSKMQLQPGDEEVRWFSFDPDV CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCC WVEREQLPCHMTRTTPETHRLIRENLHLSPVYGGWVEAKGPRYCPSIEDKIVRFVDKESH EEECCCCCEEEECCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCC QIFIEPEGRDIPELYIQGFSTGLPENLQLQMLRSLPGLENCVMLRPAYAVEYDYLPATQC EEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCCCEEEECCCCEEEECCCCCHHH YPTLMTKKVAGLFCAGQVNGTTGYEEAAAQGIVAGINAARFVRDQEMIVFPREQSYLGTL HHHHHHHHHHCEEEECCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCEEEECCCHHHHHHH VDDLCTKDLREPYRMLTSRSEYRLLLRSDNSDQRLTPLGREIGLIDDRRWQLFTRKQEQI HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH TGEKERLYATRVKENDEVGKAIASNTQQAIKGSITLADLLRRPGFHYVDLDRYGLGNPEL CCCHHHHHHHHCCCCHHHHHHHHHCHHHHHHCCCHHHHHHHCCCCCEEECCCCCCCCCCC TPAEREGAEIDIKYSGYLARQQSQIEQIARQAQRQLPRDLDYTTVETLSKEAREKLNKVK CCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC PMTIGQAARIGGVNPADINALLIYLELRQTKHQTGLAALP CCCCCCHHHCCCCCCCCCEEEEEEEEHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA