Click here to switch to the map view.

The map label for this gene is ubiA [H]

Identifier: 75909678

GI number: 75909678

Start: 4305709

End: 4306665

Strand: Direct

Name: ubiA [H]

Synonym: Ava_3472

Alternate gene names: 75909678

Gene position: 4305709-4306665 (Clockwise)

Preceding gene: 75909676

Following gene: 75909679

Centisome position: 67.64

GC content: 39.29

Gene sequence:

>957_bases
ATGAACCAAAGTTCCCAAAACAGACCATTGCGCCCTAAACCATTGCAATCATCTTTCCAGTGGCTTTATGCTTTTTGGAA
ATTTTCCCGCCCACACACAATTATTGGCACGAGTCTCAGTGTTTTGGGCTTATATTTAATTTCTATCGCTGTTAGTTCCA
CAGGTTTTGCCCTAACTCAGATAAACTCCGTTTTAGGAGCATGGCTGGCCTGTGTATGTGGCAATGTTTATATTGTGGGG
TTAAATCAATTAGAAGATATTGAAATTGATAAAGTTAATAAACCTCATTTACCTCTAGCGTCAGGGGAATTTAGCCGTAA
ACAAGGACAGATAATTGTAATTCTGACGGGAATTCTCGCCCTAGCATTAGCTTGGTTAAATGGCCCTTATTTATTTGGTA
TGGTGGCGGTGAGTTTAGCTATTGGTACAGCCTATTCTTTACCACCAATTCGTTTAAAACAGTTTCCCTTTTGGGCGGCC
CTGTGTATTTTTTCAGTACGGGGAACGATTGTCAATTTAGGATTATATCTGCACTTTAGTTGGCTACTACAAAATAAACA
GTCAATTCCTCTACCTGTATGGATATTGACGGTTTTTATTTTAATATTTACCTTTGCGATCGCCATCTTTAAAGACATCC
CTGATATGGAAGGCGATCGCCTCTACAATATTACCACTCTCACCATCCAACTAGGGCCGCAAGCCGTCTTTAATTTGGCA
ATGTGGGTATTAACAGTTTGTTACTTGGGTATGGTCATAGTTGGTGTGCTACGGCTAGGTACAATTAACTCAGTGTTTCT
GGTCATAACTCATCTCATAATCCTCTGTTGGATGTGGATGCAGAGTTTAGCCGTAGATATACATGATAAAACGGCGATCG
CTCAATTCTATCAATTCATTTGGAAGCTATTTTTCTTAGAATATTTAATGTTTCCCATTGCCTGTCTTTTAGCTTAA

Upstream 100 bases:

>100_bases
GATTTGTGTCTGTAAGTAACTGCTAAATGTTTGGATAATGGCAAAATTCTGTGACAATAGATGAACAGTAAGCCGGAATA
TCTACCTATCCAAGCTACTT

Downstream 100 bases:

>100_bases
AACTATGCTCGAACACCTTCAATTAACTGACATTTTGGCAACTGTTGCCGTCCTTGTTAGTATCACATTCCTAATTTATT
TCGCCGGGAAAACCTTAGTT

Product: tocopherol phytyltransferase

Products: NA

Alternate protein names: Geranylgeranyl bacteriochlorophyll synthase [H]

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MNQSSQNRPLRPKPLQSSFQWLYAFWKFSRPHTIIGTSLSVLGLYLISIAVSSTGFALTQINSVLGAWLACVCGNVYIVG
LNQLEDIEIDKVNKPHLPLASGEFSRKQGQIIVILTGILALALAWLNGPYLFGMVAVSLAIGTAYSLPPIRLKQFPFWAA
LCIFSVRGTIVNLGLYLHFSWLLQNKQSIPLPVWILTVFILIFTFAIAIFKDIPDMEGDRLYNITTLTIQLGPQAVFNLA
MWVLTVCYLGMVIVGVLRLGTINSVFLVITHLIILCWMWMQSLAVDIHDKTAIAQFYQFIWKLFFLEYLMFPIACLLA

Sequences:

>Translated_318_residues
MNQSSQNRPLRPKPLQSSFQWLYAFWKFSRPHTIIGTSLSVLGLYLISIAVSSTGFALTQINSVLGAWLACVCGNVYIVG
LNQLEDIEIDKVNKPHLPLASGEFSRKQGQIIVILTGILALALAWLNGPYLFGMVAVSLAIGTAYSLPPIRLKQFPFWAA
LCIFSVRGTIVNLGLYLHFSWLLQNKQSIPLPVWILTVFILIFTFAIAIFKDIPDMEGDRLYNITTLTIQLGPQAVFNLA
MWVLTVCYLGMVIVGVLRLGTINSVFLVITHLIILCWMWMQSLAVDIHDKTAIAQFYQFIWKLFFLEYLMFPIACLLA
>Mature_318_residues
MNQSSQNRPLRPKPLQSSFQWLYAFWKFSRPHTIIGTSLSVLGLYLISIAVSSTGFALTQINSVLGAWLACVCGNVYIVG
LNQLEDIEIDKVNKPHLPLASGEFSRKQGQIIVILTGILALALAWLNGPYLFGMVAVSLAIGTAYSLPPIRLKQFPFWAA
LCIFSVRGTIVNLGLYLHFSWLLQNKQSIPLPVWILTVFILIFTFAIAIFKDIPDMEGDRLYNITTLTIQLGPQAVFNLA
MWVLTVCYLGMVIVGVLRLGTINSVFLVITHLIILCWMWMQSLAVDIHDKTAIAQFYQFIWKLFFLEYLMFPIACLLA

Specific function: Catalyzes the esterification of bacteriochlorophyllide a by geranylgeraniol-PPi [H]

COG id: COG0382

COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006372
- InterPro:   IPR000537 [H]

Pfam domain/function: PF01040 UbiA [H]

EC number: NA

Molecular weight: Translated: 35752; Mature: 35752

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQSSQNRPLRPKPLQSSFQWLYAFWKFSRPHTIIGTSLSVLGLYLISIAVSSTGFALTQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHHH
INSVLGAWLACVCGNVYIVGLNQLEDIEIDKVNKPHLPLASGEFSRKQGQIIVILTGILA
HHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHH
LALAWLNGPYLFGMVAVSLAIGTAYSLPPIRLKQFPFWAALCIFSVRGTIVNLGLYLHFS
HHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
WLLQNKQSIPLPVWILTVFILIFTFAIAIFKDIPDMEGDRLYNITTLTIQLGPQAVFNLA
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECHHHHHHHH
MWVLTVCYLGMVIVGVLRLGTINSVFLVITHLIILCWMWMQSLAVDIHDKTAIAQFYQFI
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
WKLFFLEYLMFPIACLLA
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNQSSQNRPLRPKPLQSSFQWLYAFWKFSRPHTIIGTSLSVLGLYLISIAVSSTGFALTQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHHH
INSVLGAWLACVCGNVYIVGLNQLEDIEIDKVNKPHLPLASGEFSRKQGQIIVILTGILA
HHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHH
LALAWLNGPYLFGMVAVSLAIGTAYSLPPIRLKQFPFWAALCIFSVRGTIVNLGLYLHFS
HHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
WLLQNKQSIPLPVWILTVFILIFTFAIAIFKDIPDMEGDRLYNITTLTIQLGPQAVFNLA
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECHHHHHHHH
MWVLTVCYLGMVIVGVLRLGTINSVFLVITHLIILCWMWMQSLAVDIHDKTAIAQFYQFI
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
WKLFFLEYLMFPIACLLA
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10648776 [H]