| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75909676
Identifier: 75909676
GI number: 75909676
Start: 4303679
End: 4304152
Strand: Direct
Name: 75909676
Synonym: Ava_3470
Alternate gene names: NA
Gene position: 4303679-4304152 (Clockwise)
Preceding gene: 75909675
Following gene: 75909678
Centisome position: 67.61
GC content: 33.54
Gene sequence:
>474_bases ATGAAGATGATAAATCAACCTTTTTACCGACGAACTAGTATGCAAAATTTACTTGTCAAAACTTTGTTTTTTGGCATTTT CACTAGTACTAGTTTGTTTATCAGTACTGTGAGCTTAAAAGCTAATGCTCAAAATCAATCCTTTAATAATACGGAAATTA CTGGTTATGCTCAAGCTGTATTAGCAATGGAGCCAGCACGTCAACAAGCCTTTGGAGAAATTAAAAGAATTGTCGGTGAT AGAGATGTTCCCAAGATTGTTTGTAATGAGCCAAATAGTATGAATGCTCTACCAGGTAAGGCTAGAGATATTGCTGTAAA TTACTGTAATCATTCTCAAAAAATTGTTAGCGATTACGGTCTGACTATAGACCAATTTAATAGAATAACCCTGGAAATCC AAAGTAATAACAACTTAAAACGGCAGGTTTACAATACATTAATCCGCCTACAAAAAAATACTAACTCTCAATAG
Upstream 100 bases:
>100_bases AAAAATATTTTCATAGATGCTATGAGTTGCCGGAACTTATCACTCACAAAATAAATCAAAGTTACTAATATATCCTTGCT GTCTTTCTGTGTCAGACCTG
Downstream 100 bases:
>100_bases TTAAAACTATCATTTCACTTTGTCCTATTATCTTGGCGTAAATATTCTAAGTTACTATAAGGACGACAGTAAAACAATTT TATTCTAGTAGATGTTTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MKMINQPFYRRTSMQNLLVKTLFFGIFTSTSLFISTVSLKANAQNQSFNNTEITGYAQAVLAMEPARQQAFGEIKRIVGD RDVPKIVCNEPNSMNALPGKARDIAVNYCNHSQKIVSDYGLTIDQFNRITLEIQSNNNLKRQVYNTLIRLQKNTNSQ
Sequences:
>Translated_157_residues MKMINQPFYRRTSMQNLLVKTLFFGIFTSTSLFISTVSLKANAQNQSFNNTEITGYAQAVLAMEPARQQAFGEIKRIVGD RDVPKIVCNEPNSMNALPGKARDIAVNYCNHSQKIVSDYGLTIDQFNRITLEIQSNNNLKRQVYNTLIRLQKNTNSQ >Mature_157_residues MKMINQPFYRRTSMQNLLVKTLFFGIFTSTSLFISTVSLKANAQNQSFNNTEITGYAQAVLAMEPARQQAFGEIKRIVGD RDVPKIVCNEPNSMNALPGKARDIAVNYCNHSQKIVSDYGLTIDQFNRITLEIQSNNNLKRQVYNTLIRLQKNTNSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17841; Mature: 17841
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMINQPFYRRTSMQNLLVKTLFFGIFTSTSLFISTVSLKANAQNQSFNNTEITGYAQAV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCHHHHHHHH LAMEPARQQAFGEIKRIVGDRDVPKIVCNEPNSMNALPGKARDIAVNYCNHSQKIVSDYG HHHCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCHHHHHHHHC LTIDQFNRITLEIQSNNNLKRQVYNTLIRLQKNTNSQ CCHHCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKMINQPFYRRTSMQNLLVKTLFFGIFTSTSLFISTVSLKANAQNQSFNNTEITGYAQAV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCHHHHHHHH LAMEPARQQAFGEIKRIVGDRDVPKIVCNEPNSMNALPGKARDIAVNYCNHSQKIVSDYG HHHCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCHHHHHHHHC LTIDQFNRITLEIQSNNNLKRQVYNTLIRLQKNTNSQ CCHHCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA