| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75909563
Identifier: 75909563
GI number: 75909563
Start: 4177123
End: 4178151
Strand: Direct
Name: 75909563
Synonym: Ava_3357
Alternate gene names: NA
Gene position: 4177123-4178151 (Clockwise)
Preceding gene: 75909562
Following gene: 75909564
Centisome position: 65.62
GC content: 32.56
Gene sequence:
>1029_bases ATGCAGTTTATAGAAAAAATCGGTATTGTTTTAGCCACATATAATCCCAATCTAGAATATTTTGAGAAACAAATACAGTC TATTAAGCAACAAAGTTGGCAAAACTGGGTTTGTCACATTGTAGATGACTGTTCTCACTCAGAATATCAGGTGGGTATCA AGAAGATTATTGATAACGATCCACGTTTTATTTGCCATTTTCACAGTCATAATCTCAACCACTATTATAACTTTGAACGC GGTCTAAAATATTGCGCCCAAGATAAATCTATTACTGCTATATCTCTTGCTGATCAAGATGATATTTGGCATGAAGACAA GTTGAAAATTTTATTAAAAAAACTACGTTCACAAAAAGCAGTCTTAATACATTCTGATTTAGAGTTAATTAATAGTTACG ACCAGACTATTCACCCATCTGCTTGGGATTTTGAAGGACGTAAACCACACAAATTATCCCACGATTTATTGTTACTTCGC AACGTGGTAACAGGATGTTCCGTATTATTTTGTACTTCTCTGCTCACGGATGTACTGCCATTTCCACCACAAAATAAAAT TAGCTGGTATCACGATTGGTGGATAGCATTAGTTGCATCACATAGAGGCAAAATTGTACATATCCATCAACCTTTAGTTT GGTATAGAATTCATAATGCTAATAATGTCGGTGTTCTCAAAGACTCAGGCAAAATACATTGTGAATTATTGATTTTATGC CGCAAGAAATTTAAAATCAATGGCAATAGTTATTTAGTTCACCGAGACTTTAGTAAAGCATTTTATCGTCGATTTAAACG GGAACTTAATGAGATAGGTTATACCAATCCTTTTGATGATAGAAAATTGGATTTTGGTTGGAATATTCTTAAATTATTGT ATAAAAGTTTGCTCGTAGGCTATAATTCAGAAGGTGCGGCGTTAAGAATTGGGATATTGAAACTAATTTTTGATGTCCAA AGAAGTTATAGAATCATACTTTATCATTGTTTAAAAACCTTTAGAAGTTATTATAAAAACAGTCAATAA
Upstream 100 bases:
>100_bases GTTCAGCCTGCGATATTCTCCTACGCGACTGTAAACCCGATCCTGTTTATGTAGCAGATGATACCAACCCTCAATTATCT AGGTTGTCTTACTTAAGATA
Downstream 100 bases:
>100_bases GTATGTCCGAAGCGTCAAATCTTCTAGTATCAATTATTTTAGTTAACTACAATGGTGCTGATGTTATACCAAATTGCTTG AATTCCATAGATAAATTTAT
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; Glycosyl Transferase; Rhamnosyltransferase; Glycosyl Transferase Group 2 Family Protein; Glycosyltransferase-Like Protein; Alpha-L-Rha Alpha-1 3-L-Rhamnosyltransferase; Alpha-L-Rhaalpha-1 3-L-Rhamnosyltransferase; Glycosyl Transferase Group 2 Family; Family 2 Glycosyl Transferase
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MQFIEKIGIVLATYNPNLEYFEKQIQSIKQQSWQNWVCHIVDDCSHSEYQVGIKKIIDNDPRFICHFHSHNLNHYYNFER GLKYCAQDKSITAISLADQDDIWHEDKLKILLKKLRSQKAVLIHSDLELINSYDQTIHPSAWDFEGRKPHKLSHDLLLLR NVVTGCSVLFCTSLLTDVLPFPPQNKISWYHDWWIALVASHRGKIVHIHQPLVWYRIHNANNVGVLKDSGKIHCELLILC RKKFKINGNSYLVHRDFSKAFYRRFKRELNEIGYTNPFDDRKLDFGWNILKLLYKSLLVGYNSEGAALRIGILKLIFDVQ RSYRIILYHCLKTFRSYYKNSQ
Sequences:
>Translated_342_residues MQFIEKIGIVLATYNPNLEYFEKQIQSIKQQSWQNWVCHIVDDCSHSEYQVGIKKIIDNDPRFICHFHSHNLNHYYNFER GLKYCAQDKSITAISLADQDDIWHEDKLKILLKKLRSQKAVLIHSDLELINSYDQTIHPSAWDFEGRKPHKLSHDLLLLR NVVTGCSVLFCTSLLTDVLPFPPQNKISWYHDWWIALVASHRGKIVHIHQPLVWYRIHNANNVGVLKDSGKIHCELLILC RKKFKINGNSYLVHRDFSKAFYRRFKRELNEIGYTNPFDDRKLDFGWNILKLLYKSLLVGYNSEGAALRIGILKLIFDVQ RSYRIILYHCLKTFRSYYKNSQ >Mature_342_residues MQFIEKIGIVLATYNPNLEYFEKQIQSIKQQSWQNWVCHIVDDCSHSEYQVGIKKIIDNDPRFICHFHSHNLNHYYNFER GLKYCAQDKSITAISLADQDDIWHEDKLKILLKKLRSQKAVLIHSDLELINSYDQTIHPSAWDFEGRKPHKLSHDLLLLR NVVTGCSVLFCTSLLTDVLPFPPQNKISWYHDWWIALVASHRGKIVHIHQPLVWYRIHNANNVGVLKDSGKIHCELLILC RKKFKINGNSYLVHRDFSKAFYRRFKRELNEIGYTNPFDDRKLDFGWNILKLLYKSLLVGYNSEGAALRIGILKLIFDVQ RSYRIILYHCLKTFRSYYKNSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40451; Mature: 40451
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFIEKIGIVLATYNPNLEYFEKQIQSIKQQSWQNWVCHIVDDCSHSEYQVGIKKIIDND CCCHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC PRFICHFHSHNLNHYYNFERGLKYCAQDKSITAISLADQDDIWHEDKLKILLKKLRSQKA CCEEEEEECCCCCCEECHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCE VLIHSDLELINSYDQTIHPSAWDFEGRKPHKLSHDLLLLRNVVTGCSVLFCTSLLTDVLP EEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FPPQNKISWYHDWWIALVASHRGKIVHIHQPLVWYRIHNANNVGVLKDSGKIHCELLILC CCCCCCCCHHHHHHHHHHHHCCCCEEEEECCEEEEEEECCCCEEEEECCCCEEEEHEEEE RKKFKINGNSYLVHRDFSKAFYRRFKRELNEIGYTNPFDDRKLDFGWNILKLLYKSLLVG HHHEEECCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCC YNSEGAALRIGILKLIFDVQRSYRIILYHCLKTFRSYYKNSQ CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQFIEKIGIVLATYNPNLEYFEKQIQSIKQQSWQNWVCHIVDDCSHSEYQVGIKKIIDND CCCHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC PRFICHFHSHNLNHYYNFERGLKYCAQDKSITAISLADQDDIWHEDKLKILLKKLRSQKA CCEEEEEECCCCCCEECHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCE VLIHSDLELINSYDQTIHPSAWDFEGRKPHKLSHDLLLLRNVVTGCSVLFCTSLLTDVLP EEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FPPQNKISWYHDWWIALVASHRGKIVHIHQPLVWYRIHNANNVGVLKDSGKIHCELLILC CCCCCCCCHHHHHHHHHHHHCCCCEEEEECCEEEEEEECCCCEEEEECCCCEEEEHEEEE RKKFKINGNSYLVHRDFSKAFYRRFKRELNEIGYTNPFDDRKLDFGWNILKLLYKSLLVG HHHEEECCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCC YNSEGAALRIGILKLIFDVQRSYRIILYHCLKTFRSYYKNSQ CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA