| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75909540
Identifier: 75909540
GI number: 75909540
Start: 4153678
End: 4154229
Strand: Direct
Name: 75909540
Synonym: Ava_3334
Alternate gene names: NA
Gene position: 4153678-4154229 (Clockwise)
Preceding gene: 75909539
Following gene: 75909541
Centisome position: 65.25
GC content: 34.78
Gene sequence:
>552_bases ATGTTATCTAACTTAGCTTTAATCCGCGAATTTATTACTCAATCCATCGCCAAGAAAGAAGTTCTATTAGCTAATTCTGC TTTGCAGGCACAAATGGTTTACAAAAGTAACCAATTAATTGCGAAGAAAGAAGGCATAATTGCCACCACACAACTGAACA GTAACCCATCTGATTTTCTCATAGCTTCGCCTTCATCTTATTGGGATATTATGAACGAGACATTAGCTGATTACAGCTAT ATATATACAGGGGAAGTTGATAAACTAGGCTTTTATAAATATCAACAATGTTCTGTACCTCAAGGCTACCAACTTCGATG CACAACATCTGTTAATTTGTGGCAAAATTGGTGGAAGTATCGGAAAACAGCTTTCACTTCAGGAATCCCTTTAGATATTT TAATTCGGACAAGAGATTCCTGGTACGGCATCAAAGATTTATTTATTAGTGATGGTTTGATTTATATTAAAACCTTAGTC AGTGAAATGACAGTTCATTCTAATGACCTAGTAATTTGGTTGAGTAAAAATGAGCTAGAATCTCAAGCTTAA
Upstream 100 bases:
>100_bases TTAAACAAATTAGGCACAGTCAAAGAAATATCAATCATCGACAGTGGTCATTGTTAAAGTCCTTGATACAAGTTTTTTCT AAATATTTTAATGAAGAGTT
Downstream 100 bases:
>100_bases ATCAATATATTTTTAGCTTTTTTGATGCAGATTAACACTGTAGACGCTTCGGCTTTACGCAGGGTGGTTAGCGCGGAGGT ACGCAGAGATTTTCTCATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MLSNLALIREFITQSIAKKEVLLANSALQAQMVYKSNQLIAKKEGIIATTQLNSNPSDFLIASPSSYWDIMNETLADYSY IYTGEVDKLGFYKYQQCSVPQGYQLRCTTSVNLWQNWWKYRKTAFTSGIPLDILIRTRDSWYGIKDLFISDGLIYIKTLV SEMTVHSNDLVIWLSKNELESQA
Sequences:
>Translated_183_residues MLSNLALIREFITQSIAKKEVLLANSALQAQMVYKSNQLIAKKEGIIATTQLNSNPSDFLIASPSSYWDIMNETLADYSY IYTGEVDKLGFYKYQQCSVPQGYQLRCTTSVNLWQNWWKYRKTAFTSGIPLDILIRTRDSWYGIKDLFISDGLIYIKTLV SEMTVHSNDLVIWLSKNELESQA >Mature_183_residues MLSNLALIREFITQSIAKKEVLLANSALQAQMVYKSNQLIAKKEGIIATTQLNSNPSDFLIASPSSYWDIMNETLADYSY IYTGEVDKLGFYKYQQCSVPQGYQLRCTTSVNLWQNWWKYRKTAFTSGIPLDILIRTRDSWYGIKDLFISDGLIYIKTLV SEMTVHSNDLVIWLSKNELESQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21003; Mature: 21003
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSNLALIREFITQSIAKKEVLLANSALQAQMVYKSNQLIAKKEGIIATTQLNSNPSDFL CCCHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCEEEECCCEEEEEEECCCCCCEE IASPSSYWDIMNETLADYSYIYTGEVDKLGFYKYQQCSVPQGYQLRCTTSVNLWQNWWKY EECCCHHHHHHHHHHHHCEEEEECCCCCCCCEEEECCCCCCCCEEEEEEECHHHHHHHHH RKTAFTSGIPLDILIRTRDSWYGIKDLFISDGLIYIKTLVSEMTVHSNDLVIWLSKNELE HHHHHCCCCCEEEEEEECCCCCCHHHHHHCCCHHHHHHHHHHHEECCCCEEEEEECCCCC SQA CCC >Mature Secondary Structure MLSNLALIREFITQSIAKKEVLLANSALQAQMVYKSNQLIAKKEGIIATTQLNSNPSDFL CCCHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCEEEECCCEEEEEEECCCCCCEE IASPSSYWDIMNETLADYSYIYTGEVDKLGFYKYQQCSVPQGYQLRCTTSVNLWQNWWKY EECCCHHHHHHHHHHHHCEEEEECCCCCCCCEEEECCCCCCCCEEEEEEECHHHHHHHHH RKTAFTSGIPLDILIRTRDSWYGIKDLFISDGLIYIKTLVSEMTVHSNDLVIWLSKNELE HHHHHCCCCCEEEEEEECCCCCCHHHHHHCCCHHHHHHHHHHHEECCCCEEEEEECCCCC SQA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA