| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75909371
Identifier: 75909371
GI number: 75909371
Start: 3927057
End: 3929999
Strand: Direct
Name: 75909371
Synonym: Ava_3164
Alternate gene names: NA
Gene position: 3927057-3929999 (Clockwise)
Preceding gene: 75909370
Following gene: 75909372
Centisome position: 61.69
GC content: 39.52
Gene sequence:
>2943_bases ATGTTTTACGATCGCCCCCCAATTTCCCCCCCACCAATCACACCACATTCGTTAGTAAGTTCTATTCCCACACCCCAAGA TAATGATCATAGCCAAACGGCTGATACATTTAAGTATGCGATCGCTACTCCTAGTGAACTAGAAACATTTCCCAATGAGT TCTCTACAGGTGTTTCACCGCAGCTTTTTACAACAGAACATTTTAGTGAGGAACTCATTACTCAACATATAGTTAGCGAA CTACCTGTTGGTAATACGAGTAACAATAACGTCACCAATATCCCAGGAATATCTACTGTTGACAATATTAAACAAGCTCC TAAAGCTGAATCTTCTCCACCAAATTTGGGTAAACCGGAAAAAGATAATGGTGTCACAGCACCAGTAAATACAACAGATA CAATTACTTTTACCGAAACTTCTAGTTCTGGTATAGAAACTTTATTACTAGGGGTAATTATTAACCGTAGAGAAGTTGGT AGTTTAGATGTTATACGTCGAGGAAATACCTTACTAGTACCTTTAGAAAACTTTGCTCAACTTACAGGCTTAACCATTAC AACAACTGATGATACTACAGAAATCAAAACACCTCTAGGTGCTGTGAAACTAGCGTCTAGTGAACTAGAGATAATTCAGG GAATTACCCATATTAGCGATTCTTTATTACAAGAAAAACTCAATACCACAATCGAGTTGAGGTCTTTAGAAGCAGCTTTG ATTGTTGGGTTACCTTGGTTATCAGGTAGTAGAGAAGCGCGAAATGCAGCAATTGATCTAGAACCAGAAGTTAAAGCACC GCTAAGTGGATTGTCTAGTTTTAGACAGGAACTTAATGTTGTTAATGATTCTGGTGGTACTCGGTTCCAGAGTTATAGTT TGTTGGGTGGGAGACTCGCTGGCGGGACTTGGCGTATACGTTTAAATAATAATTTTGAAAATTCTCCCAACTTAGCTGAA TATTTTTTCTATAAACGTAATGGTAGATTTCTTTATCAATTAGGTCGTCAACAAATAAGTGTACATCCCCTATTAAATGG GCAAATTTTAACGGGCGCACAATTTGGTTACACTAATTTACCCGCAGATCGCTATAGACAAAGTTATAGTGCTAATCAGT TAATACCAAGAAGTTCTCGTTCTGTACAAACATTTCGAGGCGAAGTTCCTCCAGCCAGTTTTGTGCAACTGCGAGTTGGT AGTAGAATAATTGCCCAACAGCAGGTAGGATTTGATGGAAGATACGAATTTTTTGATGTAAATTTGCCTGCTGGACAAAA TAATTTAATTGAAGTTTTGGTTTACGATCGCAACAATTTCAGTGTACCTATTGAAATTCGCTCTGTGAGACTCAACACCT CAGATTTACTATTACCTCCAGGTGGTAATGTACAGTTATTGGGTTTGGGTTTTAGTGGTAACTTAGCTCAAAATGCTTTT TCTGACGATTATAATACCTCTGATTCTGGTAGCCTTGTGGGCTTTTATCAATTTAGGCAAGGTCTATCAGATAATTTTAC TGTTGAAGCTGGACTACAAGCAATTCCGAATACTTTCCAAACTCAATTAGGTGCAATTTGGCGTATAGCCAATCCTGTGA TTTTATCGGGTAGCGTGGGTACATCTTTTGGTAAGCTTGCTTATAATGCAGATTTAGATGTTCAGTTAGGTGGATTAGAT ATAAATGCTAATTCTCAGCTATTCCCCGAAGGTTATAGAAGTGATAATGGCTCAAGAGAAAGATATAATCATAGCTTAGA AGTAGGTTATCGCTTCAATAGTAATTTGAGGTTGGGAGTTTTAGCACGTAGTCGCAAATCTGATTCAAACTCAACTGAAT ACATTGCACCTACTTTCTATTTCCGTCCCTCTAATAGTTTATATTTTACAGGTAGACCTGACACTGAAGGGCAATATCTG TTTTATTCGGCATATCAACCTAATGCTTTAACTCGATTATCATTTAGTAGCTTTGGTGATAACTATGCTACGGATTTCAG TTATAAATTAAACAATAATTATCAGTTATCTTTGGGTAGTGATTTCGGTGGTAATCTACCAGCTCGCTACCTTGCTACAG TAAATTATTATCCCAGAAATATTAGAGGATTTAGTTGGAGGTTAGGGCTTGCTTATCGGGATGGCGATGTGGGGCCAATT GTTGGTGCTAGCACCCAATTGATACCGGGTCTATTTGCTAGAGTCGAATATCAAGCTATACCTTCCAGGGCTAGAAGTAA TTTTGGTGGATGGGGAGATGATCGCCTGACAATTTCTCTAGTATCCGATTTATCATTCTCTGATGGTAGAATCTCCCCAG GTAACTTTAACTCTTTTGGGAAAGATAAGGGAGCGATTTCTGGACGTATTTTTGTCGAAGGAAGTAAAGAAAGCTTTGAT TTAGGCGAGTCTAGTGTCCGAGTTACAGACAAATACGGTAAGATTATCGGTGGTGCGAGAACCAATGCTCAGGGTAACTT CTTTGTCGGTAATTTGCCAGAGGGTGTTTACATAGTTGAGGTCGTTCCCAAAGACTTACCCATAGAACTTACCCCCCTGA AAACTACCACAATTGCCGAGGTTGCGGGTGCGGCGGTAACTAAGTTGAGTTTCCCTATGAGGGTTGAATATGGCATTGCT GGACGCATTACAGATAGTGCAGGTCTGCCCGTACCGGGTTTAGCGGTAGAACTTGTTAATGCTGAAGGTAAAAAAGTTGG AACAGGCGCAACTGACGAATTTGGTCTTTATCGTGTAGATGGTCTTCCGGCTGGTCAATACACATTACAGGTTCCCAATC AAAGCAACATCAATCGTAGCAATAGCCTGCCCAAACGAGCTATAACTATTGAGAACGATTTTGCCTACGACCAAAATCTG CAATTACCCATTTCCGCAGCCACTAAAGATGCACAGGAAGCACCAAAGTTACCTAATCCTTAA
Upstream 100 bases:
>100_bases AACTGCGATTTTTTAATTGATTTAACTACTTTCTTCCCCAACTACTTTGCAGTCAAGAAATTTCTCGGCTGCTTATAGGA ACATTTGTGTTTAATTAACT
Downstream 100 bases:
>100_bases ATCTGCGTGTTGTTGAATTGATGTATGAATAAGGAAAAGCAAAGATAAAAATCTTTACCTTTTGGGAAAATTTAATTTTA TTTCGGCAACAACGCCTAAT
Product: Cna B-type
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 980; Mature: 980
Protein sequence:
>980_residues MFYDRPPISPPPITPHSLVSSIPTPQDNDHSQTADTFKYAIATPSELETFPNEFSTGVSPQLFTTEHFSEELITQHIVSE LPVGNTSNNNVTNIPGISTVDNIKQAPKAESSPPNLGKPEKDNGVTAPVNTTDTITFTETSSSGIETLLLGVIINRREVG SLDVIRRGNTLLVPLENFAQLTGLTITTTDDTTEIKTPLGAVKLASSELEIIQGITHISDSLLQEKLNTTIELRSLEAAL IVGLPWLSGSREARNAAIDLEPEVKAPLSGLSSFRQELNVVNDSGGTRFQSYSLLGGRLAGGTWRIRLNNNFENSPNLAE YFFYKRNGRFLYQLGRQQISVHPLLNGQILTGAQFGYTNLPADRYRQSYSANQLIPRSSRSVQTFRGEVPPASFVQLRVG SRIIAQQQVGFDGRYEFFDVNLPAGQNNLIEVLVYDRNNFSVPIEIRSVRLNTSDLLLPPGGNVQLLGLGFSGNLAQNAF SDDYNTSDSGSLVGFYQFRQGLSDNFTVEAGLQAIPNTFQTQLGAIWRIANPVILSGSVGTSFGKLAYNADLDVQLGGLD INANSQLFPEGYRSDNGSRERYNHSLEVGYRFNSNLRLGVLARSRKSDSNSTEYIAPTFYFRPSNSLYFTGRPDTEGQYL FYSAYQPNALTRLSFSSFGDNYATDFSYKLNNNYQLSLGSDFGGNLPARYLATVNYYPRNIRGFSWRLGLAYRDGDVGPI VGASTQLIPGLFARVEYQAIPSRARSNFGGWGDDRLTISLVSDLSFSDGRISPGNFNSFGKDKGAISGRIFVEGSKESFD LGESSVRVTDKYGKIIGGARTNAQGNFFVGNLPEGVYIVEVVPKDLPIELTPLKTTTIAEVAGAAVTKLSFPMRVEYGIA GRITDSAGLPVPGLAVELVNAEGKKVGTGATDEFGLYRVDGLPAGQYTLQVPNQSNINRSNSLPKRAITIENDFAYDQNL QLPISAATKDAQEAPKLPNP
Sequences:
>Translated_980_residues MFYDRPPISPPPITPHSLVSSIPTPQDNDHSQTADTFKYAIATPSELETFPNEFSTGVSPQLFTTEHFSEELITQHIVSE LPVGNTSNNNVTNIPGISTVDNIKQAPKAESSPPNLGKPEKDNGVTAPVNTTDTITFTETSSSGIETLLLGVIINRREVG SLDVIRRGNTLLVPLENFAQLTGLTITTTDDTTEIKTPLGAVKLASSELEIIQGITHISDSLLQEKLNTTIELRSLEAAL IVGLPWLSGSREARNAAIDLEPEVKAPLSGLSSFRQELNVVNDSGGTRFQSYSLLGGRLAGGTWRIRLNNNFENSPNLAE YFFYKRNGRFLYQLGRQQISVHPLLNGQILTGAQFGYTNLPADRYRQSYSANQLIPRSSRSVQTFRGEVPPASFVQLRVG SRIIAQQQVGFDGRYEFFDVNLPAGQNNLIEVLVYDRNNFSVPIEIRSVRLNTSDLLLPPGGNVQLLGLGFSGNLAQNAF SDDYNTSDSGSLVGFYQFRQGLSDNFTVEAGLQAIPNTFQTQLGAIWRIANPVILSGSVGTSFGKLAYNADLDVQLGGLD INANSQLFPEGYRSDNGSRERYNHSLEVGYRFNSNLRLGVLARSRKSDSNSTEYIAPTFYFRPSNSLYFTGRPDTEGQYL FYSAYQPNALTRLSFSSFGDNYATDFSYKLNNNYQLSLGSDFGGNLPARYLATVNYYPRNIRGFSWRLGLAYRDGDVGPI VGASTQLIPGLFARVEYQAIPSRARSNFGGWGDDRLTISLVSDLSFSDGRISPGNFNSFGKDKGAISGRIFVEGSKESFD LGESSVRVTDKYGKIIGGARTNAQGNFFVGNLPEGVYIVEVVPKDLPIELTPLKTTTIAEVAGAAVTKLSFPMRVEYGIA GRITDSAGLPVPGLAVELVNAEGKKVGTGATDEFGLYRVDGLPAGQYTLQVPNQSNINRSNSLPKRAITIENDFAYDQNL QLPISAATKDAQEAPKLPNP >Mature_980_residues MFYDRPPISPPPITPHSLVSSIPTPQDNDHSQTADTFKYAIATPSELETFPNEFSTGVSPQLFTTEHFSEELITQHIVSE LPVGNTSNNNVTNIPGISTVDNIKQAPKAESSPPNLGKPEKDNGVTAPVNTTDTITFTETSSSGIETLLLGVIINRREVG SLDVIRRGNTLLVPLENFAQLTGLTITTTDDTTEIKTPLGAVKLASSELEIIQGITHISDSLLQEKLNTTIELRSLEAAL IVGLPWLSGSREARNAAIDLEPEVKAPLSGLSSFRQELNVVNDSGGTRFQSYSLLGGRLAGGTWRIRLNNNFENSPNLAE YFFYKRNGRFLYQLGRQQISVHPLLNGQILTGAQFGYTNLPADRYRQSYSANQLIPRSSRSVQTFRGEVPPASFVQLRVG SRIIAQQQVGFDGRYEFFDVNLPAGQNNLIEVLVYDRNNFSVPIEIRSVRLNTSDLLLPPGGNVQLLGLGFSGNLAQNAF SDDYNTSDSGSLVGFYQFRQGLSDNFTVEAGLQAIPNTFQTQLGAIWRIANPVILSGSVGTSFGKLAYNADLDVQLGGLD INANSQLFPEGYRSDNGSRERYNHSLEVGYRFNSNLRLGVLARSRKSDSNSTEYIAPTFYFRPSNSLYFTGRPDTEGQYL FYSAYQPNALTRLSFSSFGDNYATDFSYKLNNNYQLSLGSDFGGNLPARYLATVNYYPRNIRGFSWRLGLAYRDGDVGPI VGASTQLIPGLFARVEYQAIPSRARSNFGGWGDDRLTISLVSDLSFSDGRISPGNFNSFGKDKGAISGRIFVEGSKESFD LGESSVRVTDKYGKIIGGARTNAQGNFFVGNLPEGVYIVEVVPKDLPIELTPLKTTTIAEVAGAAVTKLSFPMRVEYGIA GRITDSAGLPVPGLAVELVNAEGKKVGTGATDEFGLYRVDGLPAGQYTLQVPNQSNINRSNSLPKRAITIENDFAYDQNL QLPISAATKDAQEAPKLPNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 106922; Mature: 106922
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 0.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFYDRPPISPPPITPHSLVSSIPTPQDNDHSQTADTFKYAIATPSELETFPNEFSTGVSP CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHHHCCHHHHCCCCC QLFTTEHFSEELITQHIVSELPVGNTSNNNVTNIPGISTVDNIKQAPKAESSPPNLGKPE CEEEHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCHHHHHHCCCCCCCCCCCCCCC KDNGVTAPVNTTDTITFTETSSSGIETLLLGVIINRREVGSLDVIRRGNTLLVPLENFAQ CCCCEECCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEECCCEEEEECHHHHH LTGLTITTTDDTTEIKTPLGAVKLASSELEIIQGITHISDSLLQEKLNTTIELRSLEAAL HHCEEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEE IVGLPWLSGSREARNAAIDLEPEVKAPLSGLSSFRQELNVVNDSGGTRFQSYSLLGGRLA EEEECCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCEEECCCCCEEEEEEECCCEEC GGTWRIRLNNNFENSPNLAEYFFYKRNGRFLYQLGRQQISVHPLLNGQILTGAQFGYTNL CCEEEEEECCCCCCCCCHHHEEEEECCCCEEEEECCCEEEEEEEECCEEEECCCCCCCCC PADRYRQSYSANQLIPRSSRSVQTFRGEVPPASFVQLRVGSRIIAQQQVGFDGRYEFFDV CHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCEEEEECCCEEEEHHHCCCCCCEEEEEE NLPAGQNNLIEVLVYDRNNFSVPIEIRSVRLNTSDLLLPPGGNVQLLGLGFSGNLAQNAF ECCCCCCCEEEEEEEECCCEEEEEEEEEEEECCCCEEECCCCCEEEEEECCCCCCHHCCC SDDYNTSDSGSLVGFYQFRQGLSDNFTVEAGLQAIPNTFQTQLGAIWRIANPVILSGSVG CCCCCCCCCCCEEEEHHHHCCCCCCEEEECCHHHCCHHHHHHHHHHEEECCCEEEECCCC TSFGKLAYNADLDVQLGGLDINANSQLFPEGYRSDNGSRERYNHSLEVGYRFNSNLRLGV CCCCCEEECCCCEEEECCEEECCCCCCCCCCCCCCCCCHHHCCCEEEEEEEECCCCEEEE LARSRKSDSNSTEYIAPTFYFRPSNSLYFTGRPDTEGQYLFYSAYQPNALTRLSFSSFGD EEECCCCCCCCCEEEEEEEEECCCCCEEEECCCCCCCCEEEEEEECCCCEEEEEHHHCCC NYATDFSYKLNNNYQLSLGSDFGGNLPARYLATVNYYPRNIRGFSWRLGLAYRDGDVGPI CCCCEEEEEECCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEECCCCCCC VGASTQLIPGLFARVEYQAIPSRARSNFGGWGDDRLTISLVSDLSFSDGRISPGNFNSFG CCCCHHHHHHHHHHEEHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCC KDKGAISGRIFVEGSKESFDLGESSVRVTDKYGKIIGGARTNAQGNFFVGNLPEGVYIVE CCCCCEEEEEEEECCCCCCCCCCCCEEEEEHHCCEECCCCCCCCCCEEECCCCCCEEEEE VVPKDLPIELTPLKTTTIAEVAGAAVTKLSFPMRVEYGIAGRITDSAGLPVPGLAVELVN ECCCCCCEEEECCCCHHHHHHHHHHHHEECCCEEEEECCEEEEECCCCCCCCCEEEEEEC AEGKKVGTGATDEFGLYRVDGLPAGQYTLQVPNQSNINRSNSLPKRAITIENDFAYDQNL CCCCEECCCCCCCCCEEEECCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCC QLPISAATKDAQEAPKLPNP EEEEHHCCCCHHHCCCCCCC >Mature Secondary Structure MFYDRPPISPPPITPHSLVSSIPTPQDNDHSQTADTFKYAIATPSELETFPNEFSTGVSP CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHHHCCHHHHCCCCC QLFTTEHFSEELITQHIVSELPVGNTSNNNVTNIPGISTVDNIKQAPKAESSPPNLGKPE CEEEHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCHHHHHHCCCCCCCCCCCCCCC KDNGVTAPVNTTDTITFTETSSSGIETLLLGVIINRREVGSLDVIRRGNTLLVPLENFAQ CCCCEECCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEECCCEEEEECHHHHH LTGLTITTTDDTTEIKTPLGAVKLASSELEIIQGITHISDSLLQEKLNTTIELRSLEAAL HHCEEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEE IVGLPWLSGSREARNAAIDLEPEVKAPLSGLSSFRQELNVVNDSGGTRFQSYSLLGGRLA EEEECCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCEEECCCCCEEEEEEECCCEEC GGTWRIRLNNNFENSPNLAEYFFYKRNGRFLYQLGRQQISVHPLLNGQILTGAQFGYTNL CCEEEEEECCCCCCCCCHHHEEEEECCCCEEEEECCCEEEEEEEECCEEEECCCCCCCCC PADRYRQSYSANQLIPRSSRSVQTFRGEVPPASFVQLRVGSRIIAQQQVGFDGRYEFFDV CHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCEEEEECCCEEEEHHHCCCCCCEEEEEE NLPAGQNNLIEVLVYDRNNFSVPIEIRSVRLNTSDLLLPPGGNVQLLGLGFSGNLAQNAF ECCCCCCCEEEEEEEECCCEEEEEEEEEEEECCCCEEECCCCCEEEEEECCCCCCHHCCC SDDYNTSDSGSLVGFYQFRQGLSDNFTVEAGLQAIPNTFQTQLGAIWRIANPVILSGSVG CCCCCCCCCCCEEEEHHHHCCCCCCEEEECCHHHCCHHHHHHHHHHEEECCCEEEECCCC TSFGKLAYNADLDVQLGGLDINANSQLFPEGYRSDNGSRERYNHSLEVGYRFNSNLRLGV CCCCCEEECCCCEEEECCEEECCCCCCCCCCCCCCCCCHHHCCCEEEEEEEECCCCEEEE LARSRKSDSNSTEYIAPTFYFRPSNSLYFTGRPDTEGQYLFYSAYQPNALTRLSFSSFGD EEECCCCCCCCCEEEEEEEEECCCCCEEEECCCCCCCCEEEEEEECCCCEEEEEHHHCCC NYATDFSYKLNNNYQLSLGSDFGGNLPARYLATVNYYPRNIRGFSWRLGLAYRDGDVGPI CCCCEEEEEECCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEECCCCCCC VGASTQLIPGLFARVEYQAIPSRARSNFGGWGDDRLTISLVSDLSFSDGRISPGNFNSFG CCCCHHHHHHHHHHEEHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCC KDKGAISGRIFVEGSKESFDLGESSVRVTDKYGKIIGGARTNAQGNFFVGNLPEGVYIVE CCCCCEEEEEEEECCCCCCCCCCCCEEEEEHHCCEECCCCCCCCCCEEECCCCCCEEEEE VVPKDLPIELTPLKTTTIAEVAGAAVTKLSFPMRVEYGIAGRITDSAGLPVPGLAVELVN ECCCCCCEEEECCCCHHHHHHHHHHHHEECCCEEEEECCEEEEECCCCCCCCCEEEEEEC AEGKKVGTGATDEFGLYRVDGLPAGQYTLQVPNQSNINRSNSLPKRAITIENDFAYDQNL CCCCEECCCCCCCCCEEEECCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCC QLPISAATKDAQEAPKLPNP EEEEHHCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA