| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75909370
Identifier: 75909370
GI number: 75909370
Start: 3925969
End: 3926940
Strand: Direct
Name: 75909370
Synonym: Ava_3163
Alternate gene names: NA
Gene position: 3925969-3926940 (Clockwise)
Preceding gene: 75909369
Following gene: 75909371
Centisome position: 61.67
GC content: 39.92
Gene sequence:
>972_bases ATGATGAACAAGCAGATAAAGCTAACTAAAACACTAAGAAATGTTGGGCTGAGTATCTTAGCAACAGCGAGCGCAGTTGC TTTAGCTTGTAATTCTACTTCAGCTATTTCTATTGGTGTTAGCCCTCCACGCTTTGAGTTAAAGCTTGACCAAAGAAGGT CTAGTACTCAATCTTTTCAAGTAGTAAATAACGGGAAAAAACCATCGACTTTTAGAATCTATACTCAAGATTGGACACTC GACGAAAAAAATAATATTAAAGCCGTACCAACTTCTGAACAGTCGCTGTCTTCATCAATTGTAGTTAACCCAGTTAGGTT TACTATTCCCCCAGGAAAAGCTCAAAGTGTCAGATTTTCCGTGCGTCCCCGTGTACAGCCTAAATCCGGAGAACATCGAG CTTTTATCTTTATAGAAGAAGTTCCTTCTGAAGATAGAGACGCAAGTCCTAAAAGTGTAGCTGATGTGAGAGTTGTTGGA CGTTTTGGGGTTGCTGTCTATGGTTATGTTGGTGAAATCAAGAGAGTTGCTTCACTCAATAAAATTACTGTAGATACTAA AACTGGCCCCGTACAAGCAAATTTTGATATTTCTAGTCAAGGTAATGGCTATGTGCGGATGGCTGGTCAATATGCTATTT GGCCGGCTGCTAAATATCCAGGTGCTAATGCTACTAAACAAATTGCCAATTTAGAAAAGAAAACTACAAAATTACCAGAA AATGTCTTGAGTGCTGGTTTCTTACCTAGAAGCCCCATATTACCAGATACTCGTCGTCAAATCCCTCTCCGAATACCACA AAAACTAACACCTGGTCAATATGTTTTAGACATTAACGGTGAATTGAATGGGATCAAAATTGATCAAGGTATCCCTTTCA GTGTGTCAGTTTTAGCGAGTACTCCTCGAAAGCCTTTAACCAGTCCTGCTGATTCGTCTCGTCGTAACATCATTCCCAGA CGCACAAGATAG
Upstream 100 bases:
>100_bases TTTACTTTAGACTTATCACAAGTAACAAAATCCGGTATTCATTCTGGTAGTTTGCAGTTAACAATTACAGAATTTTAAAC AATTAATCTATTTATTATTA
Downstream 100 bases:
>100_bases CATTTGTTGGTACATCAACTGCGATTTTTTAATTGATTTAACTACTTTCTTCCCCAACTACTTTGCAGTCAAGAAATTTC TCGGCTGCTTATAGGAACAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MMNKQIKLTKTLRNVGLSILATASAVALACNSTSAISIGVSPPRFELKLDQRRSSTQSFQVVNNGKKPSTFRIYTQDWTL DEKNNIKAVPTSEQSLSSSIVVNPVRFTIPPGKAQSVRFSVRPRVQPKSGEHRAFIFIEEVPSEDRDASPKSVADVRVVG RFGVAVYGYVGEIKRVASLNKITVDTKTGPVQANFDISSQGNGYVRMAGQYAIWPAAKYPGANATKQIANLEKKTTKLPE NVLSAGFLPRSPILPDTRRQIPLRIPQKLTPGQYVLDINGELNGIKIDQGIPFSVSVLASTPRKPLTSPADSSRRNIIPR RTR
Sequences:
>Translated_323_residues MMNKQIKLTKTLRNVGLSILATASAVALACNSTSAISIGVSPPRFELKLDQRRSSTQSFQVVNNGKKPSTFRIYTQDWTL DEKNNIKAVPTSEQSLSSSIVVNPVRFTIPPGKAQSVRFSVRPRVQPKSGEHRAFIFIEEVPSEDRDASPKSVADVRVVG RFGVAVYGYVGEIKRVASLNKITVDTKTGPVQANFDISSQGNGYVRMAGQYAIWPAAKYPGANATKQIANLEKKTTKLPE NVLSAGFLPRSPILPDTRRQIPLRIPQKLTPGQYVLDINGELNGIKIDQGIPFSVSVLASTPRKPLTSPADSSRRNIIPR RTR >Mature_323_residues MMNKQIKLTKTLRNVGLSILATASAVALACNSTSAISIGVSPPRFELKLDQRRSSTQSFQVVNNGKKPSTFRIYTQDWTL DEKNNIKAVPTSEQSLSSSIVVNPVRFTIPPGKAQSVRFSVRPRVQPKSGEHRAFIFIEEVPSEDRDASPKSVADVRVVG RFGVAVYGYVGEIKRVASLNKITVDTKTGPVQANFDISSQGNGYVRMAGQYAIWPAAKYPGANATKQIANLEKKTTKLPE NVLSAGFLPRSPILPDTRRQIPLRIPQKLTPGQYVLDINGELNGIKIDQGIPFSVSVLASTPRKPLTSPADSSRRNIIPR RTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35394; Mature: 35394
Theoretical pI: Translated: 11.10; Mature: 11.10
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNKQIKLTKTLRNVGLSILATASAVALACNSTSAISIGVSPPRFELKLDQRRSSTQSFQ CCCCEEHHHHHHHHCCEEEEEHHCEEEEEECCCCEEEECCCCCEEEEEECCCCCCCCEEE VVNNGKKPSTFRIYTQDWTLDEKNNIKAVPTSEQSLSSSIVVNPVRFTIPPGKAQSVRFS EEECCCCCCEEEEEEECCCCCCCCCEEECCCCHHHCCCCEEEEEEEEEECCCCCCEEEEE VRPRVQPKSGEHRAFIFIEEVPSEDRDASPKSVADVRVVGRFGVAVYGYVGEIKRVASLN ECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCEEEEHHHHHHHHHHCCC KITVDTKTGPVQANFDISSQGNGYVRMAGQYAIWPAAKYPGANATKQIANLEKKTTKLPE EEEEECCCCCEEEEEEECCCCCCEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCH NVLSAGFLPRSPILPDTRRQIPLRIPQKLTPGQYVLDINGELNGIKIDQGIPFSVSVLAS HHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCEEEEECCCCCCEEECCCCCEEEEEEEC TPRKPLTSPADSSRRNIIPRRTR CCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MMNKQIKLTKTLRNVGLSILATASAVALACNSTSAISIGVSPPRFELKLDQRRSSTQSFQ CCCCEEHHHHHHHHCCEEEEEHHCEEEEEECCCCEEEECCCCCEEEEEECCCCCCCCEEE VVNNGKKPSTFRIYTQDWTLDEKNNIKAVPTSEQSLSSSIVVNPVRFTIPPGKAQSVRFS EEECCCCCCEEEEEEECCCCCCCCCEEECCCCHHHCCCCEEEEEEEEEECCCCCCEEEEE VRPRVQPKSGEHRAFIFIEEVPSEDRDASPKSVADVRVVGRFGVAVYGYVGEIKRVASLN ECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCEEEEHHHHHHHHHHCCC KITVDTKTGPVQANFDISSQGNGYVRMAGQYAIWPAAKYPGANATKQIANLEKKTTKLPE EEEEECCCCCEEEEEEECCCCCCEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCH NVLSAGFLPRSPILPDTRRQIPLRIPQKLTPGQYVLDINGELNGIKIDQGIPFSVSVLAS HHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCEEEEECCCCCCEEECCCCCEEEEEEEC TPRKPLTSPADSSRRNIIPRRTR CCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA