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The map label for this gene is yfhP [C]

Identifier: 75909333

GI number: 75909333

Start: 3882306

End: 3882749

Strand: Direct

Name: yfhP [C]

Synonym: Ava_3126

Alternate gene names: 75909333

Gene position: 3882306-3882749 (Clockwise)

Preceding gene: 75909331

Following gene: 75909334

Centisome position: 60.99

GC content: 41.44

Gene sequence:

>444_bases
ATGAAACTAACAACCAGAGGACACTATAGTGTAAAGGCTTTGCTGGACTTGAGTTTGCAACCTAGCTATGGCCCTGCATC
TGTGAAAGCGATCGCTAAACGTCAAGATATCCCAGCTCCATACCTGGAAAAATTACTAATAGAAATGCGTCGTGCTGGCT
TAGTCAAATCAATTCGAGGTAGCATTGGTGGCTATCAACTAGCACGAGAACCAGCAAAAATATCCATAGGACAAATTTTA
GAGGCAGTTGATGAAACTATCACTAATTTACCCCGCCATACTCCGACCCCAGCACAAACAGAAGATTGGGTAACATTTAG
CCTTTGGCAAAGACTCAACCAAAAACTAAAAGAGGCTTTATACAGTATTACTTTGGCAGATTTGTATTACGATGCTCGTA
GCTGGCAAGCTTCTCTTGGAGAAGAAGCAAATTTTGTGGTTTAA

Upstream 100 bases:

>100_bases
TTAAGGAGAAAAATGATAAGTAAAACTGATCCTTAGTCATTAGTCATTGGTCATTGGCGATGAAAAAACAACTGACAACT
GACAACTGACAACTAACAAA

Downstream 100 bases:

>100_bases
CAATCGTCAGTTGTCGGTTGACATTTGCTTTCATTCATGACCAACAACATCTATGTCTTAATCGTTGCTGTAATTTTAGA
TTATTTAATAGGTGATCCTT

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MKLTTRGHYSVKALLDLSLQPSYGPASVKAIAKRQDIPAPYLEKLLIEMRRAGLVKSIRGSIGGYQLAREPAKISIGQIL
EAVDETITNLPRHTPTPAQTEDWVTFSLWQRLNQKLKEALYSITLADLYYDARSWQASLGEEANFVV

Sequences:

>Translated_147_residues
MKLTTRGHYSVKALLDLSLQPSYGPASVKAIAKRQDIPAPYLEKLLIEMRRAGLVKSIRGSIGGYQLAREPAKISIGQIL
EAVDETITNLPRHTPTPAQTEDWVTFSLWQRLNQKLKEALYSITLADLYYDARSWQASLGEEANFVV
>Mature_147_residues
MKLTTRGHYSVKALLDLSLQPSYGPASVKAIAKRQDIPAPYLEKLLIEMRRAGLVKSIRGSIGGYQLAREPAKISIGQIL
EAVDETITNLPRHTPTPAQTEDWVTFSLWQRLNQKLKEALYSITLADLYYDARSWQASLGEEANFVV

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=129, Percent_Identity=36.4341085271318, Blast_Score=95, Evalue=2e-21,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 16472; Mature: 16472

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTTRGHYSVKALLDLSLQPSYGPASVKAIAKRQDIPAPYLEKLLIEMRRAGLVKSIRG
CCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
SIGGYQLAREPAKISIGQILEAVDETITNLPRHTPTPAQTEDWVTFSLWQRLNQKLKEAL
CCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
YSITLADLYYDARSWQASLGEEANFVV
HHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKLTTRGHYSVKALLDLSLQPSYGPASVKAIAKRQDIPAPYLEKLLIEMRRAGLVKSIRG
CCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
SIGGYQLAREPAKISIGQILEAVDETITNLPRHTPTPAQTEDWVTFSLWQRLNQKLKEAL
CCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
YSITLADLYYDARSWQASLGEEANFVV
HHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]