| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75909018
Identifier: 75909018
GI number: 75909018
Start: 3465403
End: 3467304
Strand: Direct
Name: 75909018
Synonym: Ava_2806
Alternate gene names: NA
Gene position: 3465403-3467304 (Clockwise)
Preceding gene: 75909017
Following gene: 75909019
Centisome position: 54.44
GC content: 32.75
Gene sequence:
>1902_bases ATGTTCCGGCTTAATACAAGAAAAATTAAGCAAGAAATTATTATTTTGCGACAGGTAGCTATACCTGGAATGACTGTTTT ATTTATTATTATAATTGCCAGATTATCCGGTTTATTGCAGGGCTTAGAATTGATATTATTTGATACTTTTTTACGGTTGC GCCCAGCCGAAATTACTGACCCAAAAATAGTGATTATTGGAATTAATGAAAATGACATTCGTAGTTTAGGAACTTACCCG GTGCCAGATGCAGAAATTGCTTCATTGATTCAAAAAATTCAGATTTACAAACCCGCAGTGATTGGACTTGATATTGTAAA AAATGTCCCAATAGAACCAGGACATCAAGAACTTATCAAAGCATTTCAACAATATCAAAACCTGATTGGTATTGAGAAAG TTTTACCACCTGACGAAATTTCTCCACCACCAAACCTACCACCAAAACAAATAGGTTTTTCTGATGTAATCGCAGATAGA GATGGTAACTATCGTCGCTATTTACTTTTGACCGCCTCACCCCAAAATCCCGAAAATCCCCAAGATGATAAATATTCCCT AGCCCTAAGATTAGCACAAGGTTATTTAGCTACTAAAAATATAATTATAGATACGGGAAAATATAATTCTTATATTCGAT TTGCTGATATAGAACTGCCTATATTTTCTGCAAATACTGGTGGATATGTAGGAGAAAATGATACTGGCTTAAAAATGCTA GTTAATTTTCGCAGTGGTAAGCAACCATTTCGGTTTATTTCTCTAAATGATATTAAAAGTAGTAAATTTGATCCAAATTG GCTCAAGCAAAAAATAATCATAATTGGTGTAACTGCTGCTAGTAGTAATGATTTATTTAATACTTCAGCAACTACTAGCT CAAAAATTCATAGTCAAATTTATGGAGTCGAATTTCATGCCCATGTTACTTCGCAAATAATTAATGCAGTTGTCAATGAT AGACCATTATTAAAAGTTTGGTCTGACGGGTGGGAATATTTATGGTTAGTGATTTGGGGTGTGACAGCAATAATTATTGC TAGAGTGACAGAGACTTTTCGCAGAAATTTATTAACTATTATATTAATAATATTTTGCTTAATAAGTATCAGCTACTTAC TCATCTTATTAGGTTGGTGGATTCCTCTAGCACCGACTTTACTAATTTTAGGAATTAACGGTTTGGGAATCAGTGTCTTT GCTTTTCATGAATATAAACAAAATCAAATAAAAATACAGCTAAGTCAACACACTATAGAGCATACATTTACACTTATTCA TAATGGACCGTTACAGACTTTAGCTAATATATTGAGGCAGGTAGGTACAGACAACTTACAAAACGATAAATTAATATTGC AGTTAGAAAAACTTAATTCTGAAATTCGTTCTATCGGTGAATATTTAAGGATCGAAGCATTAACCCCCAATGAAAGCTTG CGCTTAGGTAGCCGTGTCAAAATTGACTTAAAAAGACCAATCCATGAGCTATTTTACGAAGTATACACAAGTACTATTGC CAGAGATGATTTAGAGTATTTCTATAACATTAACGTCAAAGTCCGCACATTTGAGCCTATAGATGAAAAATACTTAAATA TAGAAAAAAAACAAGAGTTGTGCCTATTTTTGGAAGAAGCTTTATGTAATGTAGGAAAACACGCCAAAGGTGTCAAACGA ATTGAAGCCATTGGTAAGAAAGAACGAAGTTCATATACTTTGATGATTAAAGACAATGGTTGTGGACTTACTTCATTTTC TGAAAATAAAGGGATGAAACAACTTAAAAATATTGCTAAAAAACTAGGAGGAAATTTCAAGTGTGAATCCCTTTACCCCA AAGGAACAATCTGTGAAGTTACATGGAAATTAACAAACAATAAAAATAACTATTTGAATTAG
Upstream 100 bases:
>100_bases TTGGCATTTATCCAGAACCAGGAAAAAATATGCGAATTCAAACTGAAATCCGCGCTCGACAAGAAGGATTGATTGATTAG TTATTATTTATTGCTTACTT
Downstream 100 bases:
>100_bases ATTTGATTATGGAAAATATTTTATTATCTGTAGGGTGGACATTGCCCACCTCATCATGCTTCTGATGGACATTGCCCAAC GCCACTTGTTCCAAGCCGGG
Product: sensor protein
Products: 3',5'-cyclic AMP; diphosphate
Alternate protein names: None
Number of amino acids: Translated: 633; Mature: 633
Protein sequence:
>633_residues MFRLNTRKIKQEIIILRQVAIPGMTVLFIIIIARLSGLLQGLELILFDTFLRLRPAEITDPKIVIIGINENDIRSLGTYP VPDAEIASLIQKIQIYKPAVIGLDIVKNVPIEPGHQELIKAFQQYQNLIGIEKVLPPDEISPPPNLPPKQIGFSDVIADR DGNYRRYLLLTASPQNPENPQDDKYSLALRLAQGYLATKNIIIDTGKYNSYIRFADIELPIFSANTGGYVGENDTGLKML VNFRSGKQPFRFISLNDIKSSKFDPNWLKQKIIIIGVTAASSNDLFNTSATTSSKIHSQIYGVEFHAHVTSQIINAVVND RPLLKVWSDGWEYLWLVIWGVTAIIIARVTETFRRNLLTIILIIFCLISISYLLILLGWWIPLAPTLLILGINGLGISVF AFHEYKQNQIKIQLSQHTIEHTFTLIHNGPLQTLANILRQVGTDNLQNDKLILQLEKLNSEIRSIGEYLRIEALTPNESL RLGSRVKIDLKRPIHELFYEVYTSTIARDDLEYFYNINVKVRTFEPIDEKYLNIEKKQELCLFLEEALCNVGKHAKGVKR IEAIGKKERSSYTLMIKDNGCGLTSFSENKGMKQLKNIAKKLGGNFKCESLYPKGTICEVTWKLTNNKNNYLN
Sequences:
>Translated_633_residues MFRLNTRKIKQEIIILRQVAIPGMTVLFIIIIARLSGLLQGLELILFDTFLRLRPAEITDPKIVIIGINENDIRSLGTYP VPDAEIASLIQKIQIYKPAVIGLDIVKNVPIEPGHQELIKAFQQYQNLIGIEKVLPPDEISPPPNLPPKQIGFSDVIADR DGNYRRYLLLTASPQNPENPQDDKYSLALRLAQGYLATKNIIIDTGKYNSYIRFADIELPIFSANTGGYVGENDTGLKML VNFRSGKQPFRFISLNDIKSSKFDPNWLKQKIIIIGVTAASSNDLFNTSATTSSKIHSQIYGVEFHAHVTSQIINAVVND RPLLKVWSDGWEYLWLVIWGVTAIIIARVTETFRRNLLTIILIIFCLISISYLLILLGWWIPLAPTLLILGINGLGISVF AFHEYKQNQIKIQLSQHTIEHTFTLIHNGPLQTLANILRQVGTDNLQNDKLILQLEKLNSEIRSIGEYLRIEALTPNESL RLGSRVKIDLKRPIHELFYEVYTSTIARDDLEYFYNINVKVRTFEPIDEKYLNIEKKQELCLFLEEALCNVGKHAKGVKR IEAIGKKERSSYTLMIKDNGCGLTSFSENKGMKQLKNIAKKLGGNFKCESLYPKGTICEVTWKLTNNKNNYLN >Mature_633_residues MFRLNTRKIKQEIIILRQVAIPGMTVLFIIIIARLSGLLQGLELILFDTFLRLRPAEITDPKIVIIGINENDIRSLGTYP VPDAEIASLIQKIQIYKPAVIGLDIVKNVPIEPGHQELIKAFQQYQNLIGIEKVLPPDEISPPPNLPPKQIGFSDVIADR DGNYRRYLLLTASPQNPENPQDDKYSLALRLAQGYLATKNIIIDTGKYNSYIRFADIELPIFSANTGGYVGENDTGLKML VNFRSGKQPFRFISLNDIKSSKFDPNWLKQKIIIIGVTAASSNDLFNTSATTSSKIHSQIYGVEFHAHVTSQIINAVVND RPLLKVWSDGWEYLWLVIWGVTAIIIARVTETFRRNLLTIILIIFCLISISYLLILLGWWIPLAPTLLILGINGLGISVF AFHEYKQNQIKIQLSQHTIEHTFTLIHNGPLQTLANILRQVGTDNLQNDKLILQLEKLNSEIRSIGEYLRIEALTPNESL RLGSRVKIDLKRPIHELFYEVYTSTIARDDLEYFYNINVKVRTFEPIDEKYLNIEKKQELCLFLEEALCNVGKHAKGVKR IEAIGKKERSSYTLMIKDNGCGLTSFSENKGMKQLKNIAKKLGGNFKCESLYPKGTICEVTWKLTNNKNNYLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.6.1.1
Molecular weight: Translated: 71864; Mature: 71864
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRLNTRKIKQEIIILRQVAIPGMTVLFIIIIARLSGLLQGLELILFDTFLRLRPAEITD CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PKIVIIGINENDIRSLGTYPVPDAEIASLIQKIQIYKPAVIGLDIVKNVPIEPGHQELIK CEEEEEECCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEHHHHHCCCCCCCHHHHHH AFQQYQNLIGIEKVLPPDEISPPPNLPPKQIGFSDVIADRDGNYRRYLLLTASPQNPENP HHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEEEEECCCCCCCC QDDKYSLALRLAQGYLATKNIIIDTGKYNSYIRFADIELPIFSANTGGYVGENDTGLKML CCCHHHHHHHHHHCHHEECCEEEECCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCEEEE VNFRSGKQPFRFISLNDIKSSKFDPNWLKQKIIIIGVTAASSNDLFNTSATTSSKIHSQI EEECCCCCCEEEEEEECCCCCCCCHHHHHCEEEEEEEEECCCCCCCCCCCCCHHHHHHHH YGVEFHAHVTSQIINAVVNDRPLLKVWSDGWEYLWLVIWGVTAIIIARVTETFRRNLLTI CCEEEHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILIIFCLISISYLLILLGWWIPLAPTLLILGINGLGISVFAFHEYKQNQIKIQLSQHTIE HHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEECCCCCEEEEEEHHHHHH HTFTLIHNGPLQTLANILRQVGTDNLQNDKLILQLEKLNSEIRSIGEYLRIEALTPNESL HEEEEEECCHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHEEEEEECCCCCC RLGSRVKIDLKRPIHELFYEVYTSTIARDDLEYFYNINVKVRTFEPIDEKYLNIEKKQEL CCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCHHHCCCCHHHHH CLFLEEALCNVGKHAKGVKRIEAIGKKERSSYTLMIKDNGCGLTSFSENKGMKQLKNIAK HHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHH KLGGNFKCESLYPKGTICEVTWKLTNNKNNYLN HHCCCEEEECCCCCCCEEEEEEEEECCCCCCCC >Mature Secondary Structure MFRLNTRKIKQEIIILRQVAIPGMTVLFIIIIARLSGLLQGLELILFDTFLRLRPAEITD CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PKIVIIGINENDIRSLGTYPVPDAEIASLIQKIQIYKPAVIGLDIVKNVPIEPGHQELIK CEEEEEECCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEHHHHHCCCCCCCHHHHHH AFQQYQNLIGIEKVLPPDEISPPPNLPPKQIGFSDVIADRDGNYRRYLLLTASPQNPENP HHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEEEEECCCCCCCC QDDKYSLALRLAQGYLATKNIIIDTGKYNSYIRFADIELPIFSANTGGYVGENDTGLKML CCCHHHHHHHHHHCHHEECCEEEECCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCEEEE VNFRSGKQPFRFISLNDIKSSKFDPNWLKQKIIIIGVTAASSNDLFNTSATTSSKIHSQI EEECCCCCCEEEEEEECCCCCCCCHHHHHCEEEEEEEEECCCCCCCCCCCCCHHHHHHHH YGVEFHAHVTSQIINAVVNDRPLLKVWSDGWEYLWLVIWGVTAIIIARVTETFRRNLLTI CCEEEHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILIIFCLISISYLLILLGWWIPLAPTLLILGINGLGISVFAFHEYKQNQIKIQLSQHTIE HHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEECCCCCEEEEEEHHHHHH HTFTLIHNGPLQTLANILRQVGTDNLQNDKLILQLEKLNSEIRSIGEYLRIEALTPNESL HEEEEEECCHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHEEEEEECCCCCC RLGSRVKIDLKRPIHELFYEVYTSTIARDDLEYFYNINVKVRTFEPIDEKYLNIEKKQEL CCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCHHHCCCCHHHHH CLFLEEALCNVGKHAKGVKRIEAIGKKERSSYTLMIKDNGCGLTSFSENKGMKQLKNIAK HHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHH KLGGNFKCESLYPKGTICEVTWKLTNNKNNYLN HHCCCEEEECCCCCCCEEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP
Specific reaction: ATP = 3',5'-cyclic AMP + diphosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA