| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75909017
Identifier: 75909017
GI number: 75909017
Start: 3464513
End: 3465382
Strand: Direct
Name: 75909017
Synonym: Ava_2805
Alternate gene names: NA
Gene position: 3464513-3465382 (Clockwise)
Preceding gene: 75909015
Following gene: 75909018
Centisome position: 54.42
GC content: 37.59
Gene sequence:
>870_bases ATGAAACTATTAGTAAAAGCACTTACATGGATACAAAGTTTAAAACCTAGCGACTTACAAGAGCCAAATAGAGACTTTAA CTATATAAAACTCAAAATTTTCACAACTGAAACTAGTGAGCCTAATTGTGAATATACACAAATAATTAAACATTTAATTA TAGATAGAGATATAAGTATGGTTAATGTTGATCAATTGATAATGAGCCAAGATTCACCTCAATCATCCACACTGAAAATT TTAGTTGTTGATGACCACCAGTTAATTTTAAGTGGAACGCTGAATGTACTACAGCAACAATATCCAGATGCAGCGATCTC CACAGCAAAAACAGTAGTTGAGGCGCTGACACAGATGAGAAATTCTGCGTTTGATTTGATTGTCATGGATTTATCAATAC CCGAAAAAACTGGTGCGATCGCTTATATTGATACGGGTATCAATTTGCTACAACAGTTAATCCAGGAATATCCCCAACAG AATTTTTTGGTACAAAGTAGTTATGTCAAGGCTTTGGTCAGGATCAAACACGAAATTGACGAGCATCAAGGTGGCTTTGC GATCGCTGATAAGGGACTATGCGAATCTGAGATGATAGTTCGAGCTAATTTAGCACTACAAGGGGCAACCCACACCAAAG ACATCAAAACTGGATTAGAGCTGAAGCCAGAGTGGTTAGAAGTACTAAAATTAGCTTTTGAAGAAGGTTTAACAGATATA GCAATCTGCAAACGGATTCACAGATCCGAGCGCGCCGTGCGTACATACTGGACGAAGATTCAAGATGTACTTGGCATTTA TCCAGAACCAGGAAAAAATATGCGAATTCAAACTGAAATCCGCGCTCGACAAGAAGGATTGATTGATTAG
Upstream 100 bases:
>100_bases CTAACAAACATCAAATAGTTGTGTGATCAGACAAACCATTGCTCTTGAATAAATATATTCTTAATATTTTGTCTATTGAG TACCATATATACTATCTGAA
Downstream 100 bases:
>100_bases TTATTATTTATTGCTTACTTATGTTCCGGCTTAATACAAGAAAAATTAAGCAAGAAATTATTATTTTGCGACAGGTAGCT ATACCTGGAATGACTGTTTT
Product: response regulator receiver domain-containing protein
Products: NA
Alternate protein names: Response Regulator Receiver Domain Protein; Response Regulator Receiver Domain-Containing Protein; Two Component LuxR Family Transcriptional Regulator; Response Regulator; Two Component Transcriptional Regulator LuxR Family; Response Regulator Receiver Protein
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MKLLVKALTWIQSLKPSDLQEPNRDFNYIKLKIFTTETSEPNCEYTQIIKHLIIDRDISMVNVDQLIMSQDSPQSSTLKI LVVDDHQLILSGTLNVLQQQYPDAAISTAKTVVEALTQMRNSAFDLIVMDLSIPEKTGAIAYIDTGINLLQQLIQEYPQQ NFLVQSSYVKALVRIKHEIDEHQGGFAIADKGLCESEMIVRANLALQGATHTKDIKTGLELKPEWLEVLKLAFEEGLTDI AICKRIHRSERAVRTYWTKIQDVLGIYPEPGKNMRIQTEIRARQEGLID
Sequences:
>Translated_289_residues MKLLVKALTWIQSLKPSDLQEPNRDFNYIKLKIFTTETSEPNCEYTQIIKHLIIDRDISMVNVDQLIMSQDSPQSSTLKI LVVDDHQLILSGTLNVLQQQYPDAAISTAKTVVEALTQMRNSAFDLIVMDLSIPEKTGAIAYIDTGINLLQQLIQEYPQQ NFLVQSSYVKALVRIKHEIDEHQGGFAIADKGLCESEMIVRANLALQGATHTKDIKTGLELKPEWLEVLKLAFEEGLTDI AICKRIHRSERAVRTYWTKIQDVLGIYPEPGKNMRIQTEIRARQEGLID >Mature_289_residues MKLLVKALTWIQSLKPSDLQEPNRDFNYIKLKIFTTETSEPNCEYTQIIKHLIIDRDISMVNVDQLIMSQDSPQSSTLKI LVVDDHQLILSGTLNVLQQQYPDAAISTAKTVVEALTQMRNSAFDLIVMDLSIPEKTGAIAYIDTGINLLQQLIQEYPQQ NFLVQSSYVKALVRIKHEIDEHQGGFAIADKGLCESEMIVRANLALQGATHTKDIKTGLELKPEWLEVLKLAFEEGLTDI AICKRIHRSERAVRTYWTKIQDVLGIYPEPGKNMRIQTEIRARQEGLID
Specific function: Unknown
COG id: COG2197
COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32817; Mature: 32817
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLVKALTWIQSLKPSDLQEPNRDFNYIKLKIFTTETSEPNCEYTQIIKHLIIDRDISM CHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCC VNVDQLIMSQDSPQSSTLKILVVDDHQLILSGTLNVLQQQYPDAAISTAKTVVEALTQMR CCHHHHHHCCCCCCCCEEEEEEECCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH NSAFDLIVMDLSIPEKTGAIAYIDTGINLLQQLIQEYPQQNFLVQSSYVKALVRIKHEID CCCEEEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHH EHQGGFAIADKGLCESEMIVRANLALQGATHTKDIKTGLELKPEWLEVLKLAFEEGLTDI HCCCCEEEECCCCCCCHHEEEEEEEECCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCHHH AICKRIHRSERAVRTYWTKIQDVLGIYPEPGKNMRIQTEIRARQEGLID HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHCCCCC >Mature Secondary Structure MKLLVKALTWIQSLKPSDLQEPNRDFNYIKLKIFTTETSEPNCEYTQIIKHLIIDRDISM CHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCC VNVDQLIMSQDSPQSSTLKILVVDDHQLILSGTLNVLQQQYPDAAISTAKTVVEALTQMR CCHHHHHHCCCCCCCCEEEEEEECCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH NSAFDLIVMDLSIPEKTGAIAYIDTGINLLQQLIQEYPQQNFLVQSSYVKALVRIKHEID CCCEEEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHH EHQGGFAIADKGLCESEMIVRANLALQGATHTKDIKTGLELKPEWLEVLKLAFEEGLTDI HCCCCEEEECCCCCCCHHEEEEEEEECCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCHHH AICKRIHRSERAVRTYWTKIQDVLGIYPEPGKNMRIQTEIRARQEGLID HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA