| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75908569
Identifier: 75908569
GI number: 75908569
Start: 2921564
End: 2924026
Strand: Direct
Name: 75908569
Synonym: Ava_2352
Alternate gene names: NA
Gene position: 2921564-2924026 (Clockwise)
Preceding gene: 75908568
Following gene: 75908570
Centisome position: 45.9
GC content: 42.39
Gene sequence:
>2463_bases ATGAAATTAACCTTGGTTGGGTTTGGCTTTCTGGGTATATTCTGCCTATCTGCTGTTGATAATAATTGCGTTTACGCACA AGTAATTCCCGATCACACCCTCAAAACTTCTGTAAGTGGCAGTAATCCTTACATCATCACTGATGGTACTCGTATCGGCA ATAATTTATTTCATAGCTTCAGCCAATTCTCTATTCTTAAAGGTGATTCTGCATCATTTGACAATGCTATAGATATTCAA AATATTTTTAGTCGTGTGACTGGCGGTAATATTTCCAACATTGATGGTTCCATCAGTGCTAATGGTAACGCCAACTTATT CTTAATCAACCCGGCTGGGATTATATTTGGGCAAAATGCCAGTTTAAATATTGGTGGATCATTTGTCGGGACAACAGCTG AGACTATCACATTTGCTGATGGGAAGAGATTTAGTAGCACAGACACTGATACATCACCCTTGTTAACCATGAATGTACCC ACTGGGCTGCAATTTGGTAGTAATTCAGGAGGGATAACAGTTCAGGGTACAGGACATAATGCCCAATTAAGTGACTCACT ACAAGTTTCTGGACTAAATCTCAGTACCAGAGGATTACAACTACAACCAGGAAAAACACTAGGGTTATTAGGCAGCAATA TTGCCTTGGATGGTGGACTGCTCTCTGCACCAGGAGGACTAATAGAATTGGGTGGTATCACCAGTGGCAACGTCATTCTC AATTCTACTCCGCAAGGATTTGCCTTCCAGTATTCCCAAGTTCCGAGTTTTGGCAATCTTCAAATCACTCAACGAGCTTT AGCATCAACACGGGATTTCAATGGGGAAAGTGGAGGAGCCATCCATATCCAGGGAAAACAAGTCAGTATCCGCGATGGTT CGTTGATATTAGTACAAAATCGCAGCCAAAAGACAGCTGGTGATATTGCTGTTGATGCTTCAGAGTCTTTAGAACTTATT GGCAAGTCTCCTGATTTTCAAAGTTCCAGCAGTTTAGTGAATGAAAGCACTTCCTCTGGTAAGGCTGGGAATATTATCAT TAACACTCCACGATTGAACATTGATCAGGGTGGGTATATTTATAACCGGACGTTCAGCACAGCACCAGGTGGCAATATTA TCGTCAATACCGATGAAACGCGGGTTAATGGTTTTGCTTATGGTGATCCTTCCGCTTTTCGAGCAGTTAGTCAAATATTA GCTGCTTCCTATGCAGGCGGGAAAGGCGGTAATATTTCTGTCTCTACTCAAAAGCTATCTGTTTTAGCTGGGGGAAATAT AGCAGCCAGACCCTATGCTGGAGGTAATGGGGGTGATGTAACAGTAAAAGCAGATACGATAGAAGTAGATAATACAGGCT CTCCGACTGGTTTTTATTTTAGCTTAATTTCGACTGCCACCTTTGGGTCAGGTAACGCGGGAAATTTGGCACTCGATACT CGTAAATTATCCGTGCAAGCTGGCGGCAGAGTGTCTGCTTCTAGCATAATTTTAGGTAATGCTGGTGTACTCACTATTAA TGCTTCGGAATCGATTGATGTAAGTGGGGTTAAGGATGCAGACAATCCCAGCTATATCGGCACTGCTGTGCGTCCTTTTG GTGCATTTGCCCGAACTTCTCGTGCTAATTCAGGTAACACCACCATAAACACTCCAGTTTTGAATGTTACTGATAGGGCG ACAGTTTTTGTGGAAAATTCTGGTTTGGGTACGGCTGGTACGCTGCAAATTAATGCCAACACCCTTAAACTTGACAATCA TGCAAGTATTCTAGCATCTACAAAAGCTGGAGAGGGAGGCAACATCAATCTTCAACTACGGGATGTATTATTGATGCGTC ATGGTAGCTTTATCAATGCCGAAGCAGGTAGTAATGGCAATGGTGGCAATATAAGTATTAACTCTCCTAATGTTGTTGGT CTAGAAAATAGTGACATCATTGCCAATGCCGTACAAGGAAAGGGTGGCAATATTCAAATCACAACTCAGGGAATTATTGG TTTGGAGTACCGTAATCTTCTCAATCCTAGAGAAATTTTGAGTAATGACATTACCGCTAGTTCCCAATTCAGTATTAGTG GTACAGTCCAAATTAATAATGTTGGTGTTGATCCCAATTCTGGTTTAATAGATTTACCGACCAATCTCTCAGACCCATCA CAACAAGTTGCCACGGGTTGTTCTAATACTAATAGTAGTAGTTTTGTGGCTACGGGACGGGGTGGAATACCACAAAATCC TACACAACAAATGAGGAGCGATCGCACTTGGTCTGATATCCGTGATATCTCTGCATTCCACACCAAAGAACTAGCACAAG CCCAAATACCACAATCCCCAGAAAAACTTGTCCAAGCTACTTCCTGGCATCGTAACGCCCAAGGCAAAATCGAGCTGGTT GCCGCTAAATCCTCTTCGCAGATGTCACCAACCTTAACCTGTGCTGCTGCACCTCAAAATTAA
Upstream 100 bases:
>100_bases CATGGCTATACCCCAGAATTAATTGCGCCAACACAACCGTTACAAAAGACACCACCAAGGGAACAATAAATACGGAATAT AACATAAATAATATCGTTCC
Downstream 100 bases:
>100_bases TGACTGTTACGAAATTTACTGAATTGGGAAATATAGATACGTAATAAAAACAAGAAATGGATTAATGAAATTAACTTTTG TTGGACTTGGTGTGCTGAGT
Product: filamentous hemagglutinin-like protein
Products: NA
Alternate protein names: Filamentous Hemagglutinin Family Outer Membrane Protein; Filamentous Haemagglutinin Outer Membrane Protein; Filamentous Haemagglutinin Family N-Terminal Domain Protein; Filamentous Haemagglutinin-Like Protein; Hemagglutination Activity Domain-Containing Protein; Filamentous Haemagglutinin-Like; Filamentous Haemagglutinin-Like Protein Protein; Heme Utilization/Adhesion Protein
Number of amino acids: Translated: 820; Mature: 820
Protein sequence:
>820_residues MKLTLVGFGFLGIFCLSAVDNNCVYAQVIPDHTLKTSVSGSNPYIITDGTRIGNNLFHSFSQFSILKGDSASFDNAIDIQ NIFSRVTGGNISNIDGSISANGNANLFLINPAGIIFGQNASLNIGGSFVGTTAETITFADGKRFSSTDTDTSPLLTMNVP TGLQFGSNSGGITVQGTGHNAQLSDSLQVSGLNLSTRGLQLQPGKTLGLLGSNIALDGGLLSAPGGLIELGGITSGNVIL NSTPQGFAFQYSQVPSFGNLQITQRALASTRDFNGESGGAIHIQGKQVSIRDGSLILVQNRSQKTAGDIAVDASESLELI GKSPDFQSSSSLVNESTSSGKAGNIIINTPRLNIDQGGYIYNRTFSTAPGGNIIVNTDETRVNGFAYGDPSAFRAVSQIL AASYAGGKGGNISVSTQKLSVLAGGNIAARPYAGGNGGDVTVKADTIEVDNTGSPTGFYFSLISTATFGSGNAGNLALDT RKLSVQAGGRVSASSIILGNAGVLTINASESIDVSGVKDADNPSYIGTAVRPFGAFARTSRANSGNTTINTPVLNVTDRA TVFVENSGLGTAGTLQINANTLKLDNHASILASTKAGEGGNINLQLRDVLLMRHGSFINAEAGSNGNGGNISINSPNVVG LENSDIIANAVQGKGGNIQITTQGIIGLEYRNLLNPREILSNDITASSQFSISGTVQINNVGVDPNSGLIDLPTNLSDPS QQVATGCSNTNSSSFVATGRGGIPQNPTQQMRSDRTWSDIRDISAFHTKELAQAQIPQSPEKLVQATSWHRNAQGKIELV AAKSSSQMSPTLTCAAAPQN
Sequences:
>Translated_820_residues MKLTLVGFGFLGIFCLSAVDNNCVYAQVIPDHTLKTSVSGSNPYIITDGTRIGNNLFHSFSQFSILKGDSASFDNAIDIQ NIFSRVTGGNISNIDGSISANGNANLFLINPAGIIFGQNASLNIGGSFVGTTAETITFADGKRFSSTDTDTSPLLTMNVP TGLQFGSNSGGITVQGTGHNAQLSDSLQVSGLNLSTRGLQLQPGKTLGLLGSNIALDGGLLSAPGGLIELGGITSGNVIL NSTPQGFAFQYSQVPSFGNLQITQRALASTRDFNGESGGAIHIQGKQVSIRDGSLILVQNRSQKTAGDIAVDASESLELI GKSPDFQSSSSLVNESTSSGKAGNIIINTPRLNIDQGGYIYNRTFSTAPGGNIIVNTDETRVNGFAYGDPSAFRAVSQIL AASYAGGKGGNISVSTQKLSVLAGGNIAARPYAGGNGGDVTVKADTIEVDNTGSPTGFYFSLISTATFGSGNAGNLALDT RKLSVQAGGRVSASSIILGNAGVLTINASESIDVSGVKDADNPSYIGTAVRPFGAFARTSRANSGNTTINTPVLNVTDRA TVFVENSGLGTAGTLQINANTLKLDNHASILASTKAGEGGNINLQLRDVLLMRHGSFINAEAGSNGNGGNISINSPNVVG LENSDIIANAVQGKGGNIQITTQGIIGLEYRNLLNPREILSNDITASSQFSISGTVQINNVGVDPNSGLIDLPTNLSDPS QQVATGCSNTNSSSFVATGRGGIPQNPTQQMRSDRTWSDIRDISAFHTKELAQAQIPQSPEKLVQATSWHRNAQGKIELV AAKSSSQMSPTLTCAAAPQN >Mature_820_residues MKLTLVGFGFLGIFCLSAVDNNCVYAQVIPDHTLKTSVSGSNPYIITDGTRIGNNLFHSFSQFSILKGDSASFDNAIDIQ NIFSRVTGGNISNIDGSISANGNANLFLINPAGIIFGQNASLNIGGSFVGTTAETITFADGKRFSSTDTDTSPLLTMNVP TGLQFGSNSGGITVQGTGHNAQLSDSLQVSGLNLSTRGLQLQPGKTLGLLGSNIALDGGLLSAPGGLIELGGITSGNVIL NSTPQGFAFQYSQVPSFGNLQITQRALASTRDFNGESGGAIHIQGKQVSIRDGSLILVQNRSQKTAGDIAVDASESLELI GKSPDFQSSSSLVNESTSSGKAGNIIINTPRLNIDQGGYIYNRTFSTAPGGNIIVNTDETRVNGFAYGDPSAFRAVSQIL AASYAGGKGGNISVSTQKLSVLAGGNIAARPYAGGNGGDVTVKADTIEVDNTGSPTGFYFSLISTATFGSGNAGNLALDT RKLSVQAGGRVSASSIILGNAGVLTINASESIDVSGVKDADNPSYIGTAVRPFGAFARTSRANSGNTTINTPVLNVTDRA TVFVENSGLGTAGTLQINANTLKLDNHASILASTKAGEGGNINLQLRDVLLMRHGSFINAEAGSNGNGGNISINSPNVVG LENSDIIANAVQGKGGNIQITTQGIIGLEYRNLLNPREILSNDITASSQFSISGTVQINNVGVDPNSGLIDLPTNLSDPS QQVATGCSNTNSSSFVATGRGGIPQNPTQQMRSDRTWSDIRDISAFHTKELAQAQIPQSPEKLVQATSWHRNAQGKIELV AAKSSSQMSPTLTCAAAPQN
Specific function: Unknown
COG id: COG3210
COG function: function code U; Large exoproteins involved in heme utilization or adhesion
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84612; Mature: 84612
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTLVGFGFLGIFCLSAVDNNCVYAQVIPDHTLKTSVSGSNPYIITDGTRIGNNLFHSF CEEEEEEHHHHHHHHHHHCCCCEEEEEECCCCCEEEECCCCCCEEEECCCHHCHHHHHHH SQFSILKGDSASFDNAIDIQNIFSRVTGGNISNIDGSISANGNANLFLINPAGIIFGQNA HHEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEECCCCEEEEEECCCEEEEECCC SLNIGGSFVGTTAETITFADGKRFSSTDTDTSPLLTMNVPTGLQFGSNSGGITVQGTGHN CEEECCCEECCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCEECCCCCCEEEEECCCC AQLSDSLQVSGLNLSTRGLQLQPGKTLGLLGSNIALDGGLLSAPGGLIELGGITSGNVIL CEECCCEEEECCEEECCCEEECCCCEEEEECCCEEECCCEEECCCCEEEECCCCCCCEEE NSTPQGFAFQYSQVPSFGNLQITQRALASTRDFNGESGGAIHIQGKQVSIRDGSLILVQN ECCCCCCEEEECCCCCCCCEEEHHHHHHHCCCCCCCCCCEEEEECCEEEEECCCEEEEEC RSQKTAGDIAVDASESLELIGKSPDFQSSSSLVNESTSSGKAGNIIINTPRLNIDQGGYI CCCCCCCCEEEECCCCHHEECCCCCCCCCHHHHHCCCCCCCCCEEEEECCEEEECCCCEE YNRTFSTAPGGNIIVNTDETRVNGFAYGDPSAFRAVSQILAASYAGGKGGNISVSTQKLS EEEEECCCCCCCEEEECCCCEECEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEE VLAGGNIAARPYAGGNGGDVTVKADTIEVDNTGSPTGFYFSLISTATFGSGNAGNLALDT EEECCCEEECCCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEHHEECCCCCCCCEEEEE RKLSVQAGGRVSASSIILGNAGVLTINASESIDVSGVKDADNPSYIGTAVRPFGAFARTS EEEEEECCCCEEEEEEEEECCCEEEEECCCCEECCCCCCCCCCCEEEEECCCCHHHHHHC RANSGNTTINTPVLNVTDRATVFVENSGLGTAGTLQINANTLKLDNHASILASTKAGEGG CCCCCCCEEECCEEEECCCEEEEEECCCCCCEEEEEECCCEEEECCCCEEEEECCCCCCC NINLQLRDVLLMRHGSFINAEAGSNGNGGNISINSPNVVGLENSDIIANAVQGKGGNIQI EEEEEEEEEEEECCCCEEEECCCCCCCCCEEEECCCCEEEECCCCEEEEEECCCCCEEEE TTQGIIGLEYRNLLNPREILSNDITASSQFSISGTVQINNVGVDPNSGLIDLPTNLSDPS EECCEEEEHHHHCCCHHHHHHCCCCCCCEEEEEEEEEEEEECCCCCCCEEECCCCCCCCH QQVATGCSNTNSSSFVATGRGGIPQNPTQQMRSDRTWSDIRDISAFHTKELAQAQIPQSP HHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCH EKLVQATSWHRNAQGKIELVAAKSSSQMSPTLTCAAAPQN HHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCC >Mature Secondary Structure MKLTLVGFGFLGIFCLSAVDNNCVYAQVIPDHTLKTSVSGSNPYIITDGTRIGNNLFHSF CEEEEEEHHHHHHHHHHHCCCCEEEEEECCCCCEEEECCCCCCEEEECCCHHCHHHHHHH SQFSILKGDSASFDNAIDIQNIFSRVTGGNISNIDGSISANGNANLFLINPAGIIFGQNA HHEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEECCCCEEEEEECCCEEEEECCC SLNIGGSFVGTTAETITFADGKRFSSTDTDTSPLLTMNVPTGLQFGSNSGGITVQGTGHN CEEECCCEECCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCEECCCCCCEEEEECCCC AQLSDSLQVSGLNLSTRGLQLQPGKTLGLLGSNIALDGGLLSAPGGLIELGGITSGNVIL CEECCCEEEECCEEECCCEEECCCCEEEEECCCEEECCCEEECCCCEEEECCCCCCCEEE NSTPQGFAFQYSQVPSFGNLQITQRALASTRDFNGESGGAIHIQGKQVSIRDGSLILVQN ECCCCCCEEEECCCCCCCCEEEHHHHHHHCCCCCCCCCCEEEEECCEEEEECCCEEEEEC RSQKTAGDIAVDASESLELIGKSPDFQSSSSLVNESTSSGKAGNIIINTPRLNIDQGGYI CCCCCCCCEEEECCCCHHEECCCCCCCCCHHHHHCCCCCCCCCEEEEECCEEEECCCCEE YNRTFSTAPGGNIIVNTDETRVNGFAYGDPSAFRAVSQILAASYAGGKGGNISVSTQKLS EEEEECCCCCCCEEEECCCCEECEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEE VLAGGNIAARPYAGGNGGDVTVKADTIEVDNTGSPTGFYFSLISTATFGSGNAGNLALDT EEECCCEEECCCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEHHEECCCCCCCCEEEEE RKLSVQAGGRVSASSIILGNAGVLTINASESIDVSGVKDADNPSYIGTAVRPFGAFARTS EEEEEECCCCEEEEEEEEECCCEEEEECCCCEECCCCCCCCCCCEEEEECCCCHHHHHHC RANSGNTTINTPVLNVTDRATVFVENSGLGTAGTLQINANTLKLDNHASILASTKAGEGG CCCCCCCEEECCEEEECCCEEEEEECCCCCCEEEEEECCCEEEECCCCEEEEECCCCCCC NINLQLRDVLLMRHGSFINAEAGSNGNGGNISINSPNVVGLENSDIIANAVQGKGGNIQI EEEEEEEEEEEECCCCEEEECCCCCCCCCEEEECCCCEEEECCCCEEEEEECCCCCEEEE TTQGIIGLEYRNLLNPREILSNDITASSQFSISGTVQINNVGVDPNSGLIDLPTNLSDPS EECCEEEEHHHHCCCHHHHHHCCCCCCCEEEEEEEEEEEEECCCCCCCEEECCCCCCCCH QQVATGCSNTNSSSFVATGRGGIPQNPTQQMRSDRTWSDIRDISAFHTKELAQAQIPQSP HHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCH EKLVQATSWHRNAQGKIELVAAKSSSQMSPTLTCAAAPQN HHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA