| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75908570
Identifier: 75908570
GI number: 75908570
Start: 2924091
End: 2926565
Strand: Direct
Name: 75908570
Synonym: Ava_2353
Alternate gene names: NA
Gene position: 2924091-2926565 (Clockwise)
Preceding gene: 75908569
Following gene: 75908572
Centisome position: 45.93
GC content: 40.57
Gene sequence:
>2475_bases ATGAAATTAACTTTTGTTGGACTTGGTGTGCTGAGTGTAATCTGCTTATCTGCTGTTGACAACAATAGTGTTCACGCCCA AGTAATTCAAGATAATACCTTCAATACTTCTGTTACTCCCACTACTTCCATGAACGGAAGTAATGCTTACACCATCAACA ACGGCACTCGTGTCGATAATAATTTATTTCATAGCTTTAGCCAATTCTCTATTCCCACGGGCGATTCTGCATTTTTCGGC AATGATCTTAGTATAGAAAATATTTTTAGCCGGGTGACTGGTGGTAATATTTCCAAGATTGATGGTTCTATCAATGCCAA TGGTAAAGCCAATTTATTCTTACTCAACCCTGCGGGCATTATTTTTGGAAAAAATGCCAGCTTAAATATTGGTGGTTCAT TTGTCGCAACTACAGCTAATAGTATTAAGTTTGAGGATGGGACAGAATTTAGTGCTGTAAATCCTGCCGCTAAAGCGTTA TTAACAATGAGTGTACCTGTGGGTTTGCAAATGGGAAGTAACCCTGGTCAAATTACCGTCCAGAACACAGGGCATCAGTT GGCATTTCCGATTCACCCTTTGGTTTCTTCTCCAAATCGCAGCAACAATCCTGTGGGATTAAATGTTAATAATGGTAATT TGGCATTAATCGGGGGAAAAATCACCTTAGATGGAGGAGTTTTAAATGCACCATCAGGACATATTGAACTTGGTAGTGCT AGTAACGGAATAGTTAATTTAAACACTGCCTCTCAGAGTTGGAATTTTGACTATAGCAATATTCAGCAATTTGGCGATAT TCAGTTGTCCCGTCAATCACTAGCAGATGCTAGCGGTACTCCTGCGGGTTCTATTCAATTCGTAGGTCAAAATATTAGTT TAAATGATGCTTCTGCTGCCCTATTGGTTAATGAAGGAAATGGCAATTCAGGGAATATTAACATTGATGCGAGTGGATCT TTAACACTACGAGGAACTGGCACTATAGGATTTCCTCAAAGTTTATTGCGTGCTGATAATTTCAGCGATGGTAGTGGAGG TAATATCATTGCTTCGGCTTCCCAAGTATTCCTTCAAGATGGCGGATCTCTTCATGGCATTAACTTTGCTGAAGGTACAG GAAGTAATATTTTTGTAGAAACTCAGGATTTAATTCAAATAACGGGAATATCACCAGTTAGCGGATTTGCCAGTTCATTG AATACTATCACCAGAGGTTCTGGAAAAAGTGGCGATATTCAAGTAGCTACCAACAAATTGCAAGTTTTAGATGGTGCTGT TATTGGTAATTCGCCTTGGTCAAATGGTGCAGGAGGTAACATCACCATTAACGCCTCTGATTTTATCGAAGTGGCCGGAG AAAACACAAAAAACTTGGCTGACAGTGTCATCGTAGTAGGAACATTCGACGAAGGAAATTCAGGTTTATTAACTATTAAT ACTGCCCAATTGAGAGTACGAGATGGTGGAGGTATAGTTGTCTCTACCGTCAATCAAGGAAATGCTGGTGATTTAGTGAT TAATGCTTCAGACACAGTTGAGGTTAGTGGAGTGGGTAGTATTTCTGGTCTTCCTAGCCGCATTGGCGTGAGGGCAGAAT TACTTGCACCACCAATTCGACAATTATTTGGATTACCGGATGTGATTACAGGTAATATAGGTAAGCTTACCCTCAACGCC CAACGTTTACAAGTCACAAATCAGGCAATTGTAGGGGTTGATCATCAAGGCATCGGAGATGCTGGACAACTGGAAGTTAA TGCAGATTCCATCCGACTAGATAATGGTGGTAGCATTACAGCCGCTACAGTTCAAGGTGAAGGCGGTAATATTTTGATTA ATTCCAATGACCTGCTATTGCGTCATGGTAGTTCAATTATGACTAATGCAGACGGTATTGGTAACGGGGGGAATATGACC ATTAACTCTGCTGTGATTCTTGCTTTGGAAAACAGTGATATTGTCGCCAATGCCGTTCAAGGTAACGGAGGTAACATTAA CATTACTTCTCAAAGTATTTTTGGGTTGAAATACCGTAACGAACTCACTACAGAAAGTGACATCACTGCTAGTTCGCAAT TTGGTTTAAACGGAACAGTCAATATTTATCACTTTGGTGTTGATCCCAAAACTGCTTTAGTAGAATTGCCAAAAAATACT ATAGATCCGTCAAAACAAATTGCTAGTGGTTGTAATGCTAATACTGGTAGTAGTTTTGTCGCCACAGGACGGGGTGGAAT ACCACAAAATCCCACACAGGAAATTAAGAGCGATCGCACTTGGTCTGATATTCGTGACATATCTGCATTCCACACCAAAC AACAAGCACAAGCACCAAAAAATCCCGTAACACTTGTCCAAGCTACCTCTTGGCGACGTAACGCCAACGGCAAAATTGAG CTTTTTGCCGCTAAATCTCCTACAGGTGTGCAAATGTCATTAACCTGTGCATCTCTTGCCAAAAGTCAACCTTAG
Upstream 100 bases:
>100_bases CCAACCTTAACCTGTGCTGCTGCACCTCAAAATTAATGACTGTTACGAAATTTACTGAATTGGGAAATATAGATACGTAA TAAAAACAAGAAATGGATTA
Downstream 100 bases:
>100_bases GTCATTTTCATGACTTTAACTGGATAAAGATAGTACTAATTTGAAAAAAGAATGTGGCAATCCTTAATTTTAAAATTTCA ATAGCTGGCTGGGAATTACC
Product: filamentous hemagglutinin-like protein
Products: NA
Alternate protein names: Filamentous Hemagglutinin Family Outer Membrane Protein; Filamentous Haemagglutinin Outer Membrane Protein; Filamentous Haemagglutinin Family N-Terminal Domain Protein; Filamentous Haemagglutinin-Like Protein; Hemagglutination Activity Domain-Containing Protein; Filamentous Haemagglutinin-Like; Filamentous Haemagglutinin-Like Protein Protein; Heme Utilization/Adhesion Protein
Number of amino acids: Translated: 824; Mature: 824
Protein sequence:
>824_residues MKLTFVGLGVLSVICLSAVDNNSVHAQVIQDNTFNTSVTPTTSMNGSNAYTINNGTRVDNNLFHSFSQFSIPTGDSAFFG NDLSIENIFSRVTGGNISKIDGSINANGKANLFLLNPAGIIFGKNASLNIGGSFVATTANSIKFEDGTEFSAVNPAAKAL LTMSVPVGLQMGSNPGQITVQNTGHQLAFPIHPLVSSPNRSNNPVGLNVNNGNLALIGGKITLDGGVLNAPSGHIELGSA SNGIVNLNTASQSWNFDYSNIQQFGDIQLSRQSLADASGTPAGSIQFVGQNISLNDASAALLVNEGNGNSGNINIDASGS LTLRGTGTIGFPQSLLRADNFSDGSGGNIIASASQVFLQDGGSLHGINFAEGTGSNIFVETQDLIQITGISPVSGFASSL NTITRGSGKSGDIQVATNKLQVLDGAVIGNSPWSNGAGGNITINASDFIEVAGENTKNLADSVIVVGTFDEGNSGLLTIN TAQLRVRDGGGIVVSTVNQGNAGDLVINASDTVEVSGVGSISGLPSRIGVRAELLAPPIRQLFGLPDVITGNIGKLTLNA QRLQVTNQAIVGVDHQGIGDAGQLEVNADSIRLDNGGSITAATVQGEGGNILINSNDLLLRHGSSIMTNADGIGNGGNMT INSAVILALENSDIVANAVQGNGGNINITSQSIFGLKYRNELTTESDITASSQFGLNGTVNIYHFGVDPKTALVELPKNT IDPSKQIASGCNANTGSSFVATGRGGIPQNPTQEIKSDRTWSDIRDISAFHTKQQAQAPKNPVTLVQATSWRRNANGKIE LFAAKSPTGVQMSLTCASLAKSQP
Sequences:
>Translated_824_residues MKLTFVGLGVLSVICLSAVDNNSVHAQVIQDNTFNTSVTPTTSMNGSNAYTINNGTRVDNNLFHSFSQFSIPTGDSAFFG NDLSIENIFSRVTGGNISKIDGSINANGKANLFLLNPAGIIFGKNASLNIGGSFVATTANSIKFEDGTEFSAVNPAAKAL LTMSVPVGLQMGSNPGQITVQNTGHQLAFPIHPLVSSPNRSNNPVGLNVNNGNLALIGGKITLDGGVLNAPSGHIELGSA SNGIVNLNTASQSWNFDYSNIQQFGDIQLSRQSLADASGTPAGSIQFVGQNISLNDASAALLVNEGNGNSGNINIDASGS LTLRGTGTIGFPQSLLRADNFSDGSGGNIIASASQVFLQDGGSLHGINFAEGTGSNIFVETQDLIQITGISPVSGFASSL NTITRGSGKSGDIQVATNKLQVLDGAVIGNSPWSNGAGGNITINASDFIEVAGENTKNLADSVIVVGTFDEGNSGLLTIN TAQLRVRDGGGIVVSTVNQGNAGDLVINASDTVEVSGVGSISGLPSRIGVRAELLAPPIRQLFGLPDVITGNIGKLTLNA QRLQVTNQAIVGVDHQGIGDAGQLEVNADSIRLDNGGSITAATVQGEGGNILINSNDLLLRHGSSIMTNADGIGNGGNMT INSAVILALENSDIVANAVQGNGGNINITSQSIFGLKYRNELTTESDITASSQFGLNGTVNIYHFGVDPKTALVELPKNT IDPSKQIASGCNANTGSSFVATGRGGIPQNPTQEIKSDRTWSDIRDISAFHTKQQAQAPKNPVTLVQATSWRRNANGKIE LFAAKSPTGVQMSLTCASLAKSQP >Mature_824_residues MKLTFVGLGVLSVICLSAVDNNSVHAQVIQDNTFNTSVTPTTSMNGSNAYTINNGTRVDNNLFHSFSQFSIPTGDSAFFG NDLSIENIFSRVTGGNISKIDGSINANGKANLFLLNPAGIIFGKNASLNIGGSFVATTANSIKFEDGTEFSAVNPAAKAL LTMSVPVGLQMGSNPGQITVQNTGHQLAFPIHPLVSSPNRSNNPVGLNVNNGNLALIGGKITLDGGVLNAPSGHIELGSA SNGIVNLNTASQSWNFDYSNIQQFGDIQLSRQSLADASGTPAGSIQFVGQNISLNDASAALLVNEGNGNSGNINIDASGS LTLRGTGTIGFPQSLLRADNFSDGSGGNIIASASQVFLQDGGSLHGINFAEGTGSNIFVETQDLIQITGISPVSGFASSL NTITRGSGKSGDIQVATNKLQVLDGAVIGNSPWSNGAGGNITINASDFIEVAGENTKNLADSVIVVGTFDEGNSGLLTIN TAQLRVRDGGGIVVSTVNQGNAGDLVINASDTVEVSGVGSISGLPSRIGVRAELLAPPIRQLFGLPDVITGNIGKLTLNA QRLQVTNQAIVGVDHQGIGDAGQLEVNADSIRLDNGGSITAATVQGEGGNILINSNDLLLRHGSSIMTNADGIGNGGNMT INSAVILALENSDIVANAVQGNGGNINITSQSIFGLKYRNELTTESDITASSQFGLNGTVNIYHFGVDPKTALVELPKNT IDPSKQIASGCNANTGSSFVATGRGGIPQNPTQEIKSDRTWSDIRDISAFHTKQQAQAPKNPVTLVQATSWRRNANGKIE LFAAKSPTGVQMSLTCASLAKSQP
Specific function: Unknown
COG id: COG3210
COG function: function code U; Large exoproteins involved in heme utilization or adhesion
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84840; Mature: 84840
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTFVGLGVLSVICLSAVDNNSVHAQVIQDNTFNTSVTPTTSMNGSNAYTINNGTRVDN CEEEEEHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCC NLFHSFSQFSIPTGDSAFFGNDLSIENIFSRVTGGNISKIDGSINANGKANLFLLNPAGI HHHHHHHHCCCCCCCCCEECCCCCHHHHHHHHCCCCEEEECCCCCCCCCEEEEEECCCEE IFGKNASLNIGGSFVATTANSIKFEDGTEFSAVNPAAKALLTMSVPVGLQMGSNPGQITV EEECCCCEEECCEEEEECCCEEEECCCCCCCCCCHHHHEEEEEECCCEEEECCCCCEEEE QNTGHQLAFPIHPLVSSPNRSNNPVGLNVNNGNLALIGGKITLDGGVLNAPSGHIELGSA ECCCCEEEEEEEHHHCCCCCCCCCEEEEECCCCEEEEEEEEEECCCEEECCCCCEEECCC SNGIVNLNTASQSWNFDYSNIQQFGDIQLSRQSLADASGTPAGSIQFVGQNISLNDASAA CCCEEEEECCCCCCCCCHHHHHHHCCEEECHHHHCCCCCCCCCEEEEEECCEEECCCCEE LLVNEGNGNSGNINIDASGSLTLRGTGTIGFPQSLLRADNFSDGSGGNIIASASQVFLQD EEEECCCCCCCEEEEECCCEEEEEECCCCCCCHHHHHCCCCCCCCCCCEEECCEEEEEEC GGSLHGINFAEGTGSNIFVETQDLIQITGISPVSGFASSLNTITRGSGKSGDIQVATNKL CCCCCCEEECCCCCCEEEEEECCEEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEEECEE QVLDGAVIGNSPWSNGAGGNITINASDFIEVAGENTKNLADSVIVVGTFDEGNSGLLTIN EEEEEEEECCCCCCCCCCCEEEECCHHEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEE TAQLRVRDGGGIVVSTVNQGNAGDLVINASDTVEVSGVGSISGLPSRIGVRAELLAPPIR EEEEEEECCCCEEEEEECCCCCCCEEEECCCEEEEECCCCCCCCCHHHCCEEHHCCCHHH QLFGLPDVITGNIGKLTLNAQRLQVTNQAIVGVDHQGIGDAGQLEVNADSIRLDNGGSIT HHHCCCCEEECCCEEEEEEHHEEEEECCEEEEECCCCCCCCCEEEECCCEEEECCCCEEE AATVQGEGGNILINSNDLLLRHGSSIMTNADGIGNGGNMTINSAVILALENSDIVANAVQ EEEEECCCCEEEECCCCEEEECCCCEEECCCCCCCCCCEEEEEEEEEEECCCCEEEEEEE GNGGNINITSQSIFGLKYRNELTTESDITASSQFGLNGTVNIYHFGVDPKTALVELPKNT CCCCEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCC IDPSKQIASGCNANTGSSFVATGRGGIPQNPTQEIKSDRTWSDIRDISAFHTKQQAQAPK CCCHHHHHCCCCCCCCCCEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCC NPVTLVQATSWRRNANGKIELFAAKSPTGVQMSLTCASLAKSQP CCEEEEEEECCCCCCCCEEEEEEECCCCCEEEEEEHHHHHCCCC >Mature Secondary Structure MKLTFVGLGVLSVICLSAVDNNSVHAQVIQDNTFNTSVTPTTSMNGSNAYTINNGTRVDN CEEEEEHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCC NLFHSFSQFSIPTGDSAFFGNDLSIENIFSRVTGGNISKIDGSINANGKANLFLLNPAGI HHHHHHHHCCCCCCCCCEECCCCCHHHHHHHHCCCCEEEECCCCCCCCCEEEEEECCCEE IFGKNASLNIGGSFVATTANSIKFEDGTEFSAVNPAAKALLTMSVPVGLQMGSNPGQITV EEECCCCEEECCEEEEECCCEEEECCCCCCCCCCHHHHEEEEEECCCEEEECCCCCEEEE QNTGHQLAFPIHPLVSSPNRSNNPVGLNVNNGNLALIGGKITLDGGVLNAPSGHIELGSA ECCCCEEEEEEEHHHCCCCCCCCCEEEEECCCCEEEEEEEEEECCCEEECCCCCEEECCC SNGIVNLNTASQSWNFDYSNIQQFGDIQLSRQSLADASGTPAGSIQFVGQNISLNDASAA CCCEEEEECCCCCCCCCHHHHHHHCCEEECHHHHCCCCCCCCCEEEEEECCEEECCCCEE LLVNEGNGNSGNINIDASGSLTLRGTGTIGFPQSLLRADNFSDGSGGNIIASASQVFLQD EEEECCCCCCCEEEEECCCEEEEEECCCCCCCHHHHHCCCCCCCCCCCEEECCEEEEEEC GGSLHGINFAEGTGSNIFVETQDLIQITGISPVSGFASSLNTITRGSGKSGDIQVATNKL CCCCCCEEECCCCCCEEEEEECCEEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEEECEE QVLDGAVIGNSPWSNGAGGNITINASDFIEVAGENTKNLADSVIVVGTFDEGNSGLLTIN EEEEEEEECCCCCCCCCCCEEEECCHHEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEE TAQLRVRDGGGIVVSTVNQGNAGDLVINASDTVEVSGVGSISGLPSRIGVRAELLAPPIR EEEEEEECCCCEEEEEECCCCCCCEEEECCCEEEEECCCCCCCCCHHHCCEEHHCCCHHH QLFGLPDVITGNIGKLTLNAQRLQVTNQAIVGVDHQGIGDAGQLEVNADSIRLDNGGSIT HHHCCCCEEECCCEEEEEEHHEEEEECCEEEEECCCCCCCCCEEEECCCEEEECCCCEEE AATVQGEGGNILINSNDLLLRHGSSIMTNADGIGNGGNMTINSAVILALENSDIVANAVQ EEEEECCCCEEEECCCCEEEECCCCEEECCCCCCCCCCEEEEEEEEEEECCCCEEEEEEE GNGGNINITSQSIFGLKYRNELTTESDITASSQFGLNGTVNIYHFGVDPKTALVELPKNT CCCCEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCC IDPSKQIASGCNANTGSSFVATGRGGIPQNPTQEIKSDRTWSDIRDISAFHTKQQAQAPK CCCHHHHHCCCCCCCCCCEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCC NPVTLVQATSWRRNANGKIELFAAKSPTGVQMSLTCASLAKSQP CCEEEEEEECCCCCCCCEEEEEEECCCCCEEEEEEHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA