| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
Click here to switch to the map view.
The map label for this gene is 75908566
Identifier: 75908566
GI number: 75908566
Start: 2913995
End: 2916409
Strand: Direct
Name: 75908566
Synonym: Ava_2349
Alternate gene names: NA
Gene position: 2913995-2916409 (Clockwise)
Preceding gene: 75908565
Following gene: 75908567
Centisome position: 45.78
GC content: 45.18
Gene sequence:
>2415_bases ATGACAATGCTACCGTGCTGTGATCCTGTCAGTGGGCAGGTAATTCCCGATGGTAGTGTGAATACCAGAGTCTCTCAAAG CGGCGATCTCTTCACCATCACTGACGGTAATCGAGTAGGAGATAACTTATTTCATAGTTTCAGTCAATTCTCAGTTCCCA GCAACGGCACTGCTTTCTTCAATAACGCCTCAGATGTTCAAAATATTTTTAGTCGTGTCACAGGAGCCAGTGTTTCCCTA ATTGACGGTTTAATACAAGCTAATGGTAACGCTAATCTATTTTTGCTCAATCCCAAGGGAATCATTTTCGGAGCAAATGC TCAGTTAAATATTGGCGGATCATTCATCAGTACAACTGCCAACAGTATCGAATTTGCCGATGGCATTGAGTTTAGTAGCA TCAATTCTCAACCTGCTCCATTGTTGAGTATCAATGTTCCCGTTGGTCTACAACTAGGAAACAATCCTGCACCAATTAAC CTTCAAGGTACAGGACACACTTTAACCAATACCAGTGGACTGACTCTAGCTCCCCTAATTCGGACTCCTCATCCCACAAA ACTACAAGTACCATCGGGAAAAACCATAGCCCTAGTCGGCGGTGACATCAACCTCAATGGGGCAACCTTAATCGCGGAAA CGGGAGGAATAGAATTAGGTAGTGTGATTAGTCCGGGATTAGTCAACCTCATACCTAGCGCCCAGGGCTACACCTTGGGA TATAGTAATATACAACACTTTGGCAATATTCAACTAGCCGAGCGATCGCTATTAGATATAAGCGGTGTAAATGCTGGTTC CGTGCAGATTCGAGGTGGGCAACTGCGATTCACCGACGGTTCTCTAATCCTGTCACAAAATTTCGGCGCTCGCCCTGGTG GTGAAATTCGCCTCCAGACTACAGAATCCATTGAATTAATAGGCAGAACATCTGATGTTGGAATCCGGGGTGGGATACGT AGTGAAGCCTTAGGTATAGGAAACAGTAGCAATATCAATATTATTACCCCTATTCTCACCGTCAGTCAGGGAGCAGGTGT GACTAACTCAACTCTAGGATCTGCTTCTAGTGGCAATATCAACATTGAAGCAACTGCAACTTACCTCTCCGGCTTTTCAC CCACAAATCCTGTTGAAGTTACCACAATTAATACTTCCACACTAGGCAGTGGAAACGCGGGTGATCTTTTCTTCAATGGC AGTAGTCTATTAATATCAGATGGTGCTTCACTGTCTTCGACCACCTTTGGCAACGGTTCAAGTGGTAAAGTCACAATTCG CAACACTAATACCACCGTCATCGGAGAAAGTCCCTCTGAACTGTACAGCAACATTAGCTCAACGACATTTGCAACTGGAA ATGCTCAAACCCTGACCCTAGATACTAAGAACTTACAAATCTTGGATGGGGGAGCAGTGGCCACCACAGCATTTTTTGTA GGTAGTGGCGGAGACTTAAGCATCAACGCCAGCGAATCCATCACCATTAGTGGTCAAGGTCGAACCATTAGCAGTAGCAT TAACGCCTCCACTTTGCGACCCGATCCTTTTTTACGACAAAGATTTGGTCTGCCGGACATACTAACAGCAAATCCCGGCT CTGTCAGCATCACCACACCTAAGCTAACATTAACCAACGGTGGAACCGTCGGTGTCACAAATCAAGGTAGCGGCAACGGT GGTAATATGAGCATCGCTACTAATACCATCCAATTAAAAAATCAAGGTTTTATTCAAGCACAGACAAAATTTGGCAACGG TGGGAATATTCAATTATCTGCAACAGACCTATTGCTATTGCGGCAAAATAGCCTAATTACCTCCACATCTGGTGGCTCAG GAAATGGAGGTAACATCAACATCAATGCACCCATCATCACGGGACTAGAAAACAGCGACATTATTGCTAATGCCATTAGA GGTCAGGGAGGCAATATTCAAATTACCACTCAAGGTATGTTTGGACTAAAATTTCGTGACCAAATCACCCCGGAAAGTGA CATTACAGCCAGTTCCCAATTTGGATTAAGTGGCACAGTCCAAGTTAACACTGTGGGAGTTGACCCAAACTCAGGTTTAG TCGAATTACCAGCCAATGTTACCGATCCATCCCAGAAAATAGCTACAGGTTGCTCTAATAATCAAGGTAGTAGTTTTATC GCCATAGGAAGGGGTGGAGTACCGCAAAACCCGACACAAGAAATCAGGAGCGATCGCTCCTGGTCAGACACCCGCGACAT CTCTGCATACCGGGAAACACAGACAGTCCAAGCTCAAATCCCGCAACCTCCAGAAACGCTTGTCCAAGCAACGTCCTGGC AACGTAACCCTCAAGGTAAAATTGAATTAGTGGTGGCTAAATCACCTCCGCAGATGCCACCAGCCCTAACCTGTGCTGCT GTAGTTGAAAATTAA
Upstream 100 bases:
>100_bases TGATTTAATAGCACACTATTTTGGGCATCCTCAATAGCAGGTATAAATGAAAGGCTTGGTGATGAAAGCGACCTCTATTG GCTTGGGAATAGTGCTGTTA
Downstream 100 bases:
>100_bases TTAATGTTACAAAACTTACCAAAATGGGAACAATAAATTGCAGGAGAAGAAACAATAACTGGATTCATGAAATTAACTTT TGTCGGGTTTGGTGTGCTGA
Product: filamentous hemagglutinin-like protein
Products: NA
Alternate protein names: Filamentous Hemagglutinin Family Outer Membrane Protein; Filamentous Haemagglutinin Family N-Terminal Domain Protein; Filamentous Haemagglutinin Outer Membrane Protein; Filamentous Haemagglutinin-Like Protein; Hemagglutination Activity Domain-Containing Protein; Filamentous Haemagglutinin-Like; Heme Utilization/Adhesion Protein
Number of amino acids: Translated: 804; Mature: 803
Protein sequence:
>804_residues MTMLPCCDPVSGQVIPDGSVNTRVSQSGDLFTITDGNRVGDNLFHSFSQFSVPSNGTAFFNNASDVQNIFSRVTGASVSL IDGLIQANGNANLFLLNPKGIIFGANAQLNIGGSFISTTANSIEFADGIEFSSINSQPAPLLSINVPVGLQLGNNPAPIN LQGTGHTLTNTSGLTLAPLIRTPHPTKLQVPSGKTIALVGGDINLNGATLIAETGGIELGSVISPGLVNLIPSAQGYTLG YSNIQHFGNIQLAERSLLDISGVNAGSVQIRGGQLRFTDGSLILSQNFGARPGGEIRLQTTESIELIGRTSDVGIRGGIR SEALGIGNSSNINIITPILTVSQGAGVTNSTLGSASSGNINIEATATYLSGFSPTNPVEVTTINTSTLGSGNAGDLFFNG SSLLISDGASLSSTTFGNGSSGKVTIRNTNTTVIGESPSELYSNISSTTFATGNAQTLTLDTKNLQILDGGAVATTAFFV GSGGDLSINASESITISGQGRTISSSINASTLRPDPFLRQRFGLPDILTANPGSVSITTPKLTLTNGGTVGVTNQGSGNG GNMSIATNTIQLKNQGFIQAQTKFGNGGNIQLSATDLLLLRQNSLITSTSGGSGNGGNININAPIITGLENSDIIANAIR GQGGNIQITTQGMFGLKFRDQITPESDITASSQFGLSGTVQVNTVGVDPNSGLVELPANVTDPSQKIATGCSNNQGSSFI AIGRGGVPQNPTQEIRSDRSWSDTRDISAYRETQTVQAQIPQPPETLVQATSWQRNPQGKIELVVAKSPPQMPPALTCAA VVEN
Sequences:
>Translated_804_residues MTMLPCCDPVSGQVIPDGSVNTRVSQSGDLFTITDGNRVGDNLFHSFSQFSVPSNGTAFFNNASDVQNIFSRVTGASVSL IDGLIQANGNANLFLLNPKGIIFGANAQLNIGGSFISTTANSIEFADGIEFSSINSQPAPLLSINVPVGLQLGNNPAPIN LQGTGHTLTNTSGLTLAPLIRTPHPTKLQVPSGKTIALVGGDINLNGATLIAETGGIELGSVISPGLVNLIPSAQGYTLG YSNIQHFGNIQLAERSLLDISGVNAGSVQIRGGQLRFTDGSLILSQNFGARPGGEIRLQTTESIELIGRTSDVGIRGGIR SEALGIGNSSNINIITPILTVSQGAGVTNSTLGSASSGNINIEATATYLSGFSPTNPVEVTTINTSTLGSGNAGDLFFNG SSLLISDGASLSSTTFGNGSSGKVTIRNTNTTVIGESPSELYSNISSTTFATGNAQTLTLDTKNLQILDGGAVATTAFFV GSGGDLSINASESITISGQGRTISSSINASTLRPDPFLRQRFGLPDILTANPGSVSITTPKLTLTNGGTVGVTNQGSGNG GNMSIATNTIQLKNQGFIQAQTKFGNGGNIQLSATDLLLLRQNSLITSTSGGSGNGGNININAPIITGLENSDIIANAIR GQGGNIQITTQGMFGLKFRDQITPESDITASSQFGLSGTVQVNTVGVDPNSGLVELPANVTDPSQKIATGCSNNQGSSFI AIGRGGVPQNPTQEIRSDRSWSDTRDISAYRETQTVQAQIPQPPETLVQATSWQRNPQGKIELVVAKSPPQMPPALTCAA VVEN >Mature_803_residues TMLPCCDPVSGQVIPDGSVNTRVSQSGDLFTITDGNRVGDNLFHSFSQFSVPSNGTAFFNNASDVQNIFSRVTGASVSLI DGLIQANGNANLFLLNPKGIIFGANAQLNIGGSFISTTANSIEFADGIEFSSINSQPAPLLSINVPVGLQLGNNPAPINL QGTGHTLTNTSGLTLAPLIRTPHPTKLQVPSGKTIALVGGDINLNGATLIAETGGIELGSVISPGLVNLIPSAQGYTLGY SNIQHFGNIQLAERSLLDISGVNAGSVQIRGGQLRFTDGSLILSQNFGARPGGEIRLQTTESIELIGRTSDVGIRGGIRS EALGIGNSSNINIITPILTVSQGAGVTNSTLGSASSGNINIEATATYLSGFSPTNPVEVTTINTSTLGSGNAGDLFFNGS SLLISDGASLSSTTFGNGSSGKVTIRNTNTTVIGESPSELYSNISSTTFATGNAQTLTLDTKNLQILDGGAVATTAFFVG SGGDLSINASESITISGQGRTISSSINASTLRPDPFLRQRFGLPDILTANPGSVSITTPKLTLTNGGTVGVTNQGSGNGG NMSIATNTIQLKNQGFIQAQTKFGNGGNIQLSATDLLLLRQNSLITSTSGGSGNGGNININAPIITGLENSDIIANAIRG QGGNIQITTQGMFGLKFRDQITPESDITASSQFGLSGTVQVNTVGVDPNSGLVELPANVTDPSQKIATGCSNNQGSSFIA IGRGGVPQNPTQEIRSDRSWSDTRDISAYRETQTVQAQIPQPPETLVQATSWQRNPQGKIELVVAKSPPQMPPALTCAAV VEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82694; Mature: 82563
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMLPCCDPVSGQVIPDGSVNTRVSQSGDLFTITDGNRVGDNLFHSFSQFSVPSNGTAFF CCCCCCCCCCCCCEECCCCCCCEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEE NNASDVQNIFSRVTGASVSLIDGLIQANGNANLFLLNPKGIIFGANAQLNIGGSFISTTA CCHHHHHHHHHHHCCCCHHEEHHHHCCCCCCEEEEECCCCEEEECCEEEEECCCEEECCC NSIEFADGIEFSSINSQPAPLLSINVPVGLQLGNNPAPINLQGTGHTLTNTSGLTLAPLI CCEEECCCCEEECCCCCCCCEEEEECCEEEEECCCCCCEEEECCCCEEECCCCCEEEEEE RTPHPTKLQVPSGKTIALVGGDINLNGATLIAETGGIELGSVISPGLVNLIPSAQGYTLG CCCCCCEEECCCCCEEEEECCCEECCCEEEEEECCCEEECCCCCCCHHHCCCCCCCEEEE YSNIQHFGNIQLAERSLLDISGVNAGSVQIRGGQLRFTDGSLILSQNFGARPGGEIRLQT CHHHHHCCCEEEECCCEEEECCCCCCEEEEECCEEEEECCCEEEECCCCCCCCCEEEEEE TESIELIGRTSDVGIRGGIRSEALGIGNSSNINIITPILTVSQGAGVTNSTLGSASSGNI CCCEEEEECCCCCCCCCCCCHHEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCE NIEATATYLSGFSPTNPVEVTTINTSTLGSGNAGDLFFNGSSLLISDGASLSSTTFGNGS EEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCEEEECCCEEEEECCCCCCEEECCCCC SGKVTIRNTNTTVIGESPSELYSNISSTTFATGNAQTLTLDTKNLQILDGGAVATTAFFV CCEEEEEECCEEEECCCHHHHHHCCCCCEEECCCEEEEEEECCCEEEEECCCEEEEEEEE GSGGDLSINASESITISGQGRTISSSINASTLRPDPFLRQRFGLPDILTANPGSVSITTP ECCCCEEEECCCEEEEECCCEEEECCCCCCCCCCCHHHHHHCCCCCEEECCCCEEEEECC KLTLTNGGTVGVTNQGSGNGGNMSIATNTIQLKNQGFIQAQTKFGNGGNIQLSATDLLLL EEEEECCCEEEEECCCCCCCCEEEEEEEEEEECCCCEEEEEEECCCCCEEEEEEEEEEEE RQNSLITSTSGGSGNGGNININAPIITGLENSDIIANAIRGQGGNIQITTQGMFGLKFRD ECCCEEEECCCCCCCCCEEEECCCEEECCCCCCEEEEHHCCCCCCEEEEECCEEEEEECC QITPESDITASSQFGLSGTVQVNTVGVDPNSGLVELPANVTDPSQKIATGCSNNQGSSFI CCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEECCCCCCCHHHHHCCCCCCCCCEEE AIGRGGVPQNPTQEIRSDRSWSDTRDISAYRETQTVQAQIPQPPETLVQATSWQRNPQGK EEECCCCCCCCHHHHHCCCCCCCCCCHHHHHCCEEEEEECCCCHHHHHHHHCCCCCCCCC IELVVAKSPPQMPPALTCAAVVEN EEEEEECCCCCCCCCEEEEEEECC >Mature Secondary Structure TMLPCCDPVSGQVIPDGSVNTRVSQSGDLFTITDGNRVGDNLFHSFSQFSVPSNGTAFF CCCCCCCCCCCCEECCCCCCCEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEE NNASDVQNIFSRVTGASVSLIDGLIQANGNANLFLLNPKGIIFGANAQLNIGGSFISTTA CCHHHHHHHHHHHCCCCHHEEHHHHCCCCCCEEEEECCCCEEEECCEEEEECCCEEECCC NSIEFADGIEFSSINSQPAPLLSINVPVGLQLGNNPAPINLQGTGHTLTNTSGLTLAPLI CCEEECCCCEEECCCCCCCCEEEEECCEEEEECCCCCCEEEECCCCEEECCCCCEEEEEE RTPHPTKLQVPSGKTIALVGGDINLNGATLIAETGGIELGSVISPGLVNLIPSAQGYTLG CCCCCCEEECCCCCEEEEECCCEECCCEEEEEECCCEEECCCCCCCHHHCCCCCCCEEEE YSNIQHFGNIQLAERSLLDISGVNAGSVQIRGGQLRFTDGSLILSQNFGARPGGEIRLQT CHHHHHCCCEEEECCCEEEECCCCCCEEEEECCEEEEECCCEEEECCCCCCCCCEEEEEE TESIELIGRTSDVGIRGGIRSEALGIGNSSNINIITPILTVSQGAGVTNSTLGSASSGNI CCCEEEEECCCCCCCCCCCCHHEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCE NIEATATYLSGFSPTNPVEVTTINTSTLGSGNAGDLFFNGSSLLISDGASLSSTTFGNGS EEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCEEEECCCEEEEECCCCCCEEECCCCC SGKVTIRNTNTTVIGESPSELYSNISSTTFATGNAQTLTLDTKNLQILDGGAVATTAFFV CCEEEEEECCEEEECCCHHHHHHCCCCCEEECCCEEEEEEECCCEEEEECCCEEEEEEEE GSGGDLSINASESITISGQGRTISSSINASTLRPDPFLRQRFGLPDILTANPGSVSITTP ECCCCEEEECCCEEEEECCCEEEECCCCCCCCCCCHHHHHHCCCCCEEECCCCEEEEECC KLTLTNGGTVGVTNQGSGNGGNMSIATNTIQLKNQGFIQAQTKFGNGGNIQLSATDLLLL EEEEECCCEEEEECCCCCCCCEEEEEEEEEEECCCCEEEEEEECCCCCEEEEEEEEEEEE RQNSLITSTSGGSGNGGNININAPIITGLENSDIIANAIRGQGGNIQITTQGMFGLKFRD ECCCEEEECCCCCCCCCEEEECCCEEECCCCCCEEEEHHCCCCCCEEEEECCEEEEEECC QITPESDITASSQFGLSGTVQVNTVGVDPNSGLVELPANVTDPSQKIATGCSNNQGSSFI CCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEECCCCCCCHHHHHCCCCCCCCCEEE AIGRGGVPQNPTQEIRSDRSWSDTRDISAYRETQTVQAQIPQPPETLVQATSWQRNPQGK EEECCCCCCCCHHHHHCCCCCCCCCCHHHHHCCEEEEEECCCCHHHHHHHHCCCCCCCCC IELVVAKSPPQMPPALTCAAVVEN EEEEEECCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA