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The map label for this gene is hxuB [H]

Identifier: 75908565

GI number: 75908565

Start: 2912107

End: 2913873

Strand: Direct

Name: hxuB [H]

Synonym: Ava_2348

Alternate gene names: 75908565

Gene position: 2912107-2913873 (Clockwise)

Preceding gene: 75908563

Following gene: 75908566

Centisome position: 45.75

GC content: 43.35

Gene sequence:

>1767_bases
ATGAATGTACATTCAAAATTATTAGTTCAATATACAGAAAATTCCCTAATTAAACTCAAACTTATAAAATATGCTTTTGT
GATAGCAGCAGTATTGTGGGACTATCATCAGGCGATCGCCCAAACTCCTGACCCTAGCTCCTTGCCAAAGGATCGTTTAG
AAGATATTCCTACTAGGACTTTACCGTCGGAAGTATTACAAAAACCATCAGATCAAGAGCAATTGCCTACTCCAACGGAT
TTACCAGAGCAGCAAGATCCAGTACAAAATGATACTAATGCCAAATTTCGAGTTGATCGGATTGAAGTTGTTGGTAGTAA
GGTTTTCCCACCAGAAAAATTTGCCTCTATTACAGATCCTTTTGTAGGACGAGAAGTATCATTTGCAGAACTGTTGCAAG
TTAGAGATGCTATCACCAAACTCTACACTGATAACGGCTATGTAACGACAGGGGCTTTAATTACACCGCAAACAGTAGAA
GCTGGAGTTATTACTATTCAGATAGTAGAAGGCAGTTTGCAGGAAATTAAGATTGTTGGTAATCGGCGACTGCGTAGTCA
ATACATTCGCGATCGCATCCAACTAGGTGCTAGTAAACCTCTGAATGTACCGCGCTTAATAGAAAAGCTACAAATTCTGC
GTCTCGATCCCCGTATTCAAAATTTGTCAGCCGAGTTACAAATGGGTGTAGCGCCTGGAACTAACATCTTGCAAGTTGAG
GTACAAGAAGCCGATACCTTCTCGCTGACAGCAACGTTAGATAATGGGCGATCGCCTAGTGTGGGTAGTTTTCGCCGGGG
GGTAAATCTGCAAGAGGCAAATTTACTCGGTTTAGGTGACACTCTCAGCGTAGGATATAGCAATACAGACGGCAGTAATA
GCATTAATTTAAATTACCAGTTGCCAATTAATACCCATAATGGTACTGTATCCTTCGGTCTTAATCAGGGGTGGAACCGT
GTAATTGAAGACCCATTCAGCGTCCTAGATATTCAATCAAACACGACCTCTTATGAATTCGGTTATCGGCAGCCACTAAT
CCAAAAGCCAACCCAGGAATTAGCGGTGGGGCTATCTTTCTCACGCCAAGAAAGCCAAACTGAGTTAGGGCTAGATAATA
TTGGTGGGTTTCCTTTATCACCTGGTGCGGATGCAGAAGGAAGAACGAAGATTTCTGCCTTGCGCTTTACTCAGGAGTAT
ACTCAACGCAGCAATGAGCAAGTTTTTGCAGCGCGATCGCAATTTAGCTTGGGCGTAAATTGGTTCGATGCTAATGTGAA
TGAGGATGAACCAGATAGTCGCTTTTTTGCTTGGCGGGGACAGGCGCAGTGGGTAAAGCAGTTAGCCCCAGACACCCTAT
TTTTAGCTAGAGGCGATATCCAACTAGCCTCAACTTCCTTAGTACCCTTGGAACAATTTGGTCTTGGTGGTCAGTTGAGT
GTCCGAGGTTATCGCCAAGATACATTACTTACAGATAATGGTTTATTGTTGTCTGGGGAATTGAGATTACCGATTTTCCG
TGCTGCCAAATTGGGAGGCGTGCTACAACTAACACCTTTTATGGACGTAGGTACAGGCTGGAATACCCAAGGCAATAACC
CATCACCAAGTACCTTTGTGGGTACCGGGTTAGGGCTGCTATGGAAACAAGGGGATAGTTTCTCAGCTAGGCTAGACTGG
GGTATTCCTTTAACATCCGTAGATGGTGAAAAGCGATCGCTCCAAGAAAATGGGCTGTACTTTTCAATACACTATACGCC
ATTTTAA

Upstream 100 bases:

>100_bases
TAGGAAAAACGGTATTTATGCTGATGATCACTGTAAAAAATATAGACATCATATGTAATTAAACATACCCGTTAAACCGA
AGTATCGGGGATTTAAATAC

Downstream 100 bases:

>100_bases
TGGCGGCGCTGATACAACCAATGATTTAATAGCACACTATTTTGGGCATCCTCAATAGCAGGTATAAATGAAAGGCTTGG
TGATGAAAGCGACCTCTATT

Product: surface antigen variable number

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 588; Mature: 588

Protein sequence:

>588_residues
MNVHSKLLVQYTENSLIKLKLIKYAFVIAAVLWDYHQAIAQTPDPSSLPKDRLEDIPTRTLPSEVLQKPSDQEQLPTPTD
LPEQQDPVQNDTNAKFRVDRIEVVGSKVFPPEKFASITDPFVGREVSFAELLQVRDAITKLYTDNGYVTTGALITPQTVE
AGVITIQIVEGSLQEIKIVGNRRLRSQYIRDRIQLGASKPLNVPRLIEKLQILRLDPRIQNLSAELQMGVAPGTNILQVE
VQEADTFSLTATLDNGRSPSVGSFRRGVNLQEANLLGLGDTLSVGYSNTDGSNSINLNYQLPINTHNGTVSFGLNQGWNR
VIEDPFSVLDIQSNTTSYEFGYRQPLIQKPTQELAVGLSFSRQESQTELGLDNIGGFPLSPGADAEGRTKISALRFTQEY
TQRSNEQVFAARSQFSLGVNWFDANVNEDEPDSRFFAWRGQAQWVKQLAPDTLFLARGDIQLASTSLVPLEQFGLGGQLS
VRGYRQDTLLTDNGLLLSGELRLPIFRAAKLGGVLQLTPFMDVGTGWNTQGNNPSPSTFVGTGLGLLWKQGDSFSARLDW
GIPLTSVDGEKRSLQENGLYFSIHYTPF

Sequences:

>Translated_588_residues
MNVHSKLLVQYTENSLIKLKLIKYAFVIAAVLWDYHQAIAQTPDPSSLPKDRLEDIPTRTLPSEVLQKPSDQEQLPTPTD
LPEQQDPVQNDTNAKFRVDRIEVVGSKVFPPEKFASITDPFVGREVSFAELLQVRDAITKLYTDNGYVTTGALITPQTVE
AGVITIQIVEGSLQEIKIVGNRRLRSQYIRDRIQLGASKPLNVPRLIEKLQILRLDPRIQNLSAELQMGVAPGTNILQVE
VQEADTFSLTATLDNGRSPSVGSFRRGVNLQEANLLGLGDTLSVGYSNTDGSNSINLNYQLPINTHNGTVSFGLNQGWNR
VIEDPFSVLDIQSNTTSYEFGYRQPLIQKPTQELAVGLSFSRQESQTELGLDNIGGFPLSPGADAEGRTKISALRFTQEY
TQRSNEQVFAARSQFSLGVNWFDANVNEDEPDSRFFAWRGQAQWVKQLAPDTLFLARGDIQLASTSLVPLEQFGLGGQLS
VRGYRQDTLLTDNGLLLSGELRLPIFRAAKLGGVLQLTPFMDVGTGWNTQGNNPSPSTFVGTGLGLLWKQGDSFSARLDW
GIPLTSVDGEKRSLQENGLYFSIHYTPF
>Mature_588_residues
MNVHSKLLVQYTENSLIKLKLIKYAFVIAAVLWDYHQAIAQTPDPSSLPKDRLEDIPTRTLPSEVLQKPSDQEQLPTPTD
LPEQQDPVQNDTNAKFRVDRIEVVGSKVFPPEKFASITDPFVGREVSFAELLQVRDAITKLYTDNGYVTTGALITPQTVE
AGVITIQIVEGSLQEIKIVGNRRLRSQYIRDRIQLGASKPLNVPRLIEKLQILRLDPRIQNLSAELQMGVAPGTNILQVE
VQEADTFSLTATLDNGRSPSVGSFRRGVNLQEANLLGLGDTLSVGYSNTDGSNSINLNYQLPINTHNGTVSFGLNQGWNR
VIEDPFSVLDIQSNTTSYEFGYRQPLIQKPTQELAVGLSFSRQESQTELGLDNIGGFPLSPGADAEGRTKISALRFTQEY
TQRSNEQVFAARSQFSLGVNWFDANVNEDEPDSRFFAWRGQAQWVKQLAPDTLFLARGDIQLASTSLVPLEQFGLGGQLS
VRGYRQDTLLTDNGLLLSGELRLPIFRAAKLGGVLQLTPFMDVGTGWNTQGNNPSPSTFVGTGLGLLWKQGDSFSARLDW
GIPLTSVDGEKRSLQENGLYFSIHYTPF

Specific function: Probable member of a two partner secretion pathway (TPS) in which it mediates the secretion of huxA [H]

COG id: COG2831

COG function: function code U; Hemolysin activation/secretion protein

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tpsB (TC 1.B.20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013686 [H]

Pfam domain/function: PF08479 POTRA_2 [H]

EC number: NA

Molecular weight: Translated: 65061; Mature: 65061

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVHSKLLVQYTENSLIKLKLIKYAFVIAAVLWDYHQAIAQTPDPSSLPKDRLEDIPTRT
CCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCC
LPSEVLQKPSDQEQLPTPTDLPEQQDPVQNDTNAKFRVDRIEVVGSKVFPPEKFASITDP
CCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHCCCC
FVGREVSFAELLQVRDAITKLYTDNGYVTTGALITPQTVEAGVITIQIVEGSLQEIKIVG
CCCCCCCHHHHHHHHHHHHHHCCCCCEEEECEEECCCCCCCCEEEEEEECCCCEEEEEEC
NRRLRSQYIRDRIQLGASKPLNVPRLIEKLQILRLDPRIQNLSAELQMGVAPGTNILQVE
CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEECCCHHHCCCCEEEECCCCCCCEEEEE
VQEADTFSLTATLDNGRSPSVGSFRRGVNLQEANLLGLGDTLSVGYSNTDGSNSINLNYQ
EECCCEEEEEEEECCCCCCCCHHHHHCCCCCCCCEEECCCEEEECCCCCCCCCEEEEEEE
LPINTHNGTVSFGLNQGWNRVIEDPFSVLDIQSNTTSYEFGYRQPLIQKPTQELAVGLSF
EEEECCCCEEEECCCCCCHHHHCCCCEEEEECCCCCEEECCCCCCHHHCCHHHHHCCCCC
SRQESQTELGLDNIGGFPLSPGADAEGRTKISALRFTQEYTQRSNEQVFAARSQFSLGVN
CCCCCHHHCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEECEE
WFDANVNEDEPDSRFFAWRGQAQWVKQLAPDTLFLARGDIQLASTSLVPLEQFGLGGQLS
EEECCCCCCCCCCCEEEECCHHHHHHHCCCCEEEEEECCEEEECCCCCCHHHHCCCCEEE
VRGYRQDTLLTDNGLLLSGELRLPIFRAAKLGGVLQLTPFMDVGTGWNTQGNNPSPSTFV
ECCCCCCEEEECCCEEEECCCCCCHHHHHHHCCEEEECCCEECCCCCCCCCCCCCCCCEE
GTGLGLLWKQGDSFSARLDWGIPLTSVDGEKRSLQENGLYFSIHYTPF
ECCCEEEEECCCCCEEEEECCCEEECCCCHHHHHHHCCEEEEEEECCC
>Mature Secondary Structure
MNVHSKLLVQYTENSLIKLKLIKYAFVIAAVLWDYHQAIAQTPDPSSLPKDRLEDIPTRT
CCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCC
LPSEVLQKPSDQEQLPTPTDLPEQQDPVQNDTNAKFRVDRIEVVGSKVFPPEKFASITDP
CCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHCCCC
FVGREVSFAELLQVRDAITKLYTDNGYVTTGALITPQTVEAGVITIQIVEGSLQEIKIVG
CCCCCCCHHHHHHHHHHHHHHCCCCCEEEECEEECCCCCCCCEEEEEEECCCCEEEEEEC
NRRLRSQYIRDRIQLGASKPLNVPRLIEKLQILRLDPRIQNLSAELQMGVAPGTNILQVE
CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEECCCHHHCCCCEEEECCCCCCCEEEEE
VQEADTFSLTATLDNGRSPSVGSFRRGVNLQEANLLGLGDTLSVGYSNTDGSNSINLNYQ
EECCCEEEEEEEECCCCCCCCHHHHHCCCCCCCCEEECCCEEEECCCCCCCCCEEEEEEE
LPINTHNGTVSFGLNQGWNRVIEDPFSVLDIQSNTTSYEFGYRQPLIQKPTQELAVGLSF
EEEECCCCEEEECCCCCCHHHHCCCCEEEEECCCCCEEECCCCCCHHHCCHHHHHCCCCC
SRQESQTELGLDNIGGFPLSPGADAEGRTKISALRFTQEYTQRSNEQVFAARSQFSLGVN
CCCCCHHHCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEECEE
WFDANVNEDEPDSRFFAWRGQAQWVKQLAPDTLFLARGDIQLASTSLVPLEQFGLGGQLS
EEECCCCCCCCCCCEEEECCHHHHHHHCCCCEEEEEECCEEEECCCCCCHHHHCCCCEEE
VRGYRQDTLLTDNGLLLSGELRLPIFRAAKLGGVLQLTPFMDVGTGWNTQGNNPSPSTFV
ECCCCCCEEEECCCEEEECCCCCCHHHHHHHCCEEEECCCEECCCCCCCCCCCCCCCCEE
GTGLGLLWKQGDSFSARLDWGIPLTSVDGEKRSLQENGLYFSIHYTPF
ECCCEEEEECCCCCEEEEECCCEEECCCCHHHHHHHCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]